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PDB: 148 results

4MMP
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BU of 4mmp by Molmil
Structure of Sialic Acid Binding Protein from Pasturella Multocida
Descriptor: N-acetyl-beta-neuraminic acid, Sialic Acid Binding Protein
Authors:Ramaswamy, S, Thanuja, G.S.
Deposit date:2013-09-09
Release date:2014-07-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Bacterial periplasmic sialic acid-binding proteins exhibit a conserved binding site.
Acta Crystallogr.,Sect.D, 70, 2014
3B50
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BU of 3b50 by Molmil
Structure of H. influenzae sialic acid binding protein bound to Neu5Ac.
Descriptor: N-acetyl-beta-neuraminic acid, Sialic acid-binding periplasmic protein siaP
Authors:Ramaswamy, S, Coussens, N.P, Apicella, M.A, Johnston, J.W.
Deposit date:2007-10-25
Release date:2007-11-13
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Characterization of the N-Acetyl-5-neuraminic Acid-binding Site of the Extracytoplasmic Solute Receptor (SiaP) of Nontypeable Haemophilus influenzae Strain 2019
J.Biol.Chem., 283, 2008
4UW4
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BU of 4uw4 by Molmil
Human galectin-7 in complex with a galactose based dendron D2-1.
Descriptor: DENDRON D2-1, GALECTIN-7
Authors:Ramaswamy, S, Sleiman, M.H, Masuyer, G, Arbez-Gindre, C, Micha-Screttas, M, Calogeropoulou, T, Steele, B.R, Acharya, K.R.
Deposit date:2014-08-08
Release date:2014-11-12
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.766 Å)
Cite:Structural Basis of Multivalent Galactose-Based Dendrimer Recognition by Human Galectin-7.
FEBS J., 282, 2015
5ONJ
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BU of 5onj by Molmil
YnDL in Complex with 5 amino acid (PGA) complex
Descriptor: (2R,3S,4R,5R,6R)-6-((1R,2R,3S,4R,6S)-4,6-DIAMINO-2,3-DIHYDROXYCYCLOHEXYLOXY)-5-AMINO-2-(AMINOMETHYL)-TETRAHYDRO-2H-PYRAN-3,4-DIOL, YndL, ZINC ION
Authors:Ramaswamy, S, Rasheed, M, Morelli, C, Calvio, C, Sutton, B, Pastore, A.
Deposit date:2017-08-03
Release date:2018-08-29
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The structure of PghL hydrolase bound to its substrate poly-gamma-glutamate.
Febs J., 285, 2018
4UW6
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BU of 4uw6 by Molmil
Human galectin-7 in complex with a galactose based dendron D3
Descriptor: DENDRON-D3, GALECTIN-7
Authors:Ramaswamy, S, Sleiman, M.H, Masuyer, G, Arbez-Gindre, C, Micha-Screttas, M, Calogeropoulou, T, Steele, B.R, Acharya, K.R.
Deposit date:2014-08-08
Release date:2014-11-12
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Structural Basis of Multivalent Galactose-Based Dendrimer Recognition by Human Galectin-7.
FEBS J., 282, 2015
4UW5
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BU of 4uw5 by Molmil
Human galectin-7 in complex with a galactose based dendron D2-2.
Descriptor: DENDRON D2-1, HUMAN GALECTIN-7
Authors:Ramaswamy, S, Sleiman, M.H, Masuyer, G, Arbez-Gindre, C, Micha-Screttas, M, Calogeropoulou, T, Steele, B.R, Acharya, K.R.
Deposit date:2014-08-08
Release date:2014-11-12
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Structural Basis of Multivalent Galactose-Based Dendrimer Recognition by Human Galectin-7.
FEBS J., 282, 2015
4UW3
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BU of 4uw3 by Molmil
Human galectin-7 in complex with a galactose based dendron D1.
Descriptor: DENDRON-D1, HUMAN GALECTIN-7
Authors:Ramaswamy, S, Sleiman, M.H, Masuyer, G, Arbez-Gindre, C, Micha-Screttas, M, Calogeropoulou, T, Steele, B.R, Acharya, K.R.
Deposit date:2014-08-08
Release date:2014-11-12
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.479 Å)
Cite:Structural Basis of Multivalent Galactose-Based Dendrimer Recognition by Human Galectin-7.
FEBS J., 282, 2015
4MAG
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BU of 4mag by Molmil
Crystal structure of the Periplasmic Sialic Acid Binding Protein from Vibrio Cholerea
Descriptor: COBALT (II) ION, SULFATE ION, Sialic Acid Binding Protein
Authors:Ramaswamy, S, Cho, C, Apicella, M.A.
Deposit date:2013-08-16
Release date:2014-07-02
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Bacterial periplasmic sialic acid-binding proteins exhibit a conserved binding site.
Acta Crystallogr.,Sect.D, 70, 2014
5ONK
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BU of 5onk by Molmil
Native YndL
Descriptor: CITRATE ANION, IMIDAZOLE, SULFATE ION, ...
Authors:Ramaswamy, S, Rasheed, M, Morelli, C, Calvio, C, Sutton, B, Pastore, A.
Deposit date:2017-08-03
Release date:2018-08-29
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.03 Å)
Cite:The structure of PghL hydrolase bound to its substrate poly-gamma-glutamate.
FEBS J., 285, 2018
5ONL
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BU of 5onl by Molmil
YNDL-apo (Zinc-free)
Descriptor: CITRATE ANION, SULFATE ION, YndL, ...
Authors:Ramaswamy, S, Rasheed, M, Morelli, C, Calvio, C, Sutton, B, Pastore, A.
Deposit date:2017-08-03
Release date:2018-08-29
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The structure of PghL hydrolase bound to its substrate poly-gamma-glutamate.
Febs J., 285, 2018
1HLD
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BU of 1hld by Molmil
STRUCTURES OF HORSE LIVER ALCOHOL DEHYDROGENASE COMPLEXED WITH NAD+ AND SUBSTITUTED BENZYL ALCOHOLS
Descriptor: 2,3,4,5,6-PENTAFLUOROBENZYL ALCOHOL, ALCOHOL DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Ramaswamy, S, Eklund, H, Plapp, B.V.
Deposit date:1993-11-23
Release date:1994-10-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structures of horse liver alcohol dehydrogenase complexed with NAD+ and substituted benzyl alcohols.
Biochemistry, 33, 1994
1QLH
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BU of 1qlh by Molmil
HORSE LIVER ALCOHOL DEHYDROGENASE COMPLEXED TO NAD DOUBLE MUTANT OF GLY 293 ALA AND PRO 295 THR
Descriptor: ALCOHOL DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ZINC ION
Authors:Ramaswamy, S, Plapp, B.V.
Deposit date:1999-08-31
Release date:2000-01-02
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Substitutions in the Flexible Loop of Horse Liver Alcohol Dehydrogenase Hinder the Conformational Change and Unmask Hydrogen Transfer
Biochemistry, 38, 1999
1QLJ
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BU of 1qlj by Molmil
HORSE LIVER ALCOHOL DEHYDROGENASE APO ENZYME DOUBLE MUTANT OF GLY 293 ALA AND PRO 295 THR
Descriptor: ALCOHOL DEHYDROGENASE, ZINC ION
Authors:Ramaswamy, S, Plapp, B.V.
Deposit date:1999-09-01
Release date:2000-01-02
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Substitutions in the Flexible Loop of Horse Liver Alcohol Dehydrogenase Hinder the Conformational Change and Unmask Hydrogen Transfer
Biochemistry, 38, 1999
1LDY
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BU of 1ldy by Molmil
HORSE LIVER ALCOHOL DEHYDROGENASE COMPLEXED TO NADH AND CYCLOHEXYL FORMAMIDE (CXF)
Descriptor: ALCOHOL DEHYDROGENASE, CYCLOHEXYLFORMAMIDE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Ramaswamy, S, Plapp, B.V.
Deposit date:1996-12-23
Release date:1997-04-21
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Binding of formamides to liver alcohol dehydrogenase.
Biochemistry, 36, 1997
1LDE
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BU of 1lde by Molmil
HORSE LIVER ALCOHOL DEHYDROGENASE COMPLEXED TO NADH AND N-FORMYL PIPERDINE
Descriptor: LIVER ALCOHOL DEHYDROGENASE, N-FORMYLPIPERIDINE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Ramaswamy, S, Plapp, B.V.
Deposit date:1996-12-25
Release date:1997-04-01
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Binding of formamides to liver alcohol dehydrogenase.
Biochemistry, 36, 1997
2NSN
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BU of 2nsn by Molmil
Crystal structure of Caspace Activation and Recruitment Domain (CARD) of NOD1
Descriptor: Caspase recruitment domain-containing protein 4
Authors:Ramaswamy, S, Coussens, N.P.
Deposit date:2006-11-05
Release date:2006-12-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the Nod1 caspase activation and recruitment domain.
Biochem.Biophys.Res.Commun., 353, 2007
5BOK
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BU of 5bok by Molmil
Ferredoxin component of 3-nitrotoluene dioxygenase from Diaphorobacter sp. strain DS2
Descriptor: FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, Ferredoxin
Authors:Ramaswamy, S, Kumari, A, Singh, D, Gurunath, R.
Deposit date:2015-05-27
Release date:2016-07-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Ferredoxin component of 3-nitrotoluene dioxygenase from Diaphorobacter sp. strain DS2
To Be Published
5XBP
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BU of 5xbp by Molmil
Oxygenase component of 3-nitrotoluene dioxygenase from Diaphorobacter sp. strain DS2
Descriptor: 3NT oxygenase alpha subunit, 3NT oxygenase beta subunit, FE (III) ION, ...
Authors:Ramaswamy, S, Kumari, A, Singh, D, Gurunath, R.
Deposit date:2017-03-21
Release date:2017-04-19
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural and functional studies of ferredoxin and oxygenase components of 3-nitrotoluene dioxygenase from Diaphorobacter sp. strain DS2.
PLoS ONE, 12, 2017
1BTO
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BU of 1bto by Molmil
HORSE LIVER ALCOHOL DEHYDROGENASE COMPLEXED TO NADH AND (1S,3R)3-BUTYLTHIOLANE 1-OXIDE
Descriptor: 3-BUTYLTHIOLANE 1-OXIDE, LIVER ALCOHOL DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Ramaswamy, S, Plapp, B.V.
Deposit date:1996-11-08
Release date:1997-04-01
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Flexibility of liver alcohol dehydrogenase in stereoselective binding of 3-butylthiolane 1-oxides.
Biochemistry, 36, 1997
3BTO
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BU of 3bto by Molmil
HORSE LIVER ALCOHOL DEHYDROGENASE COMPLEXED TO NADH AND (1S,3S)3-BUTYLTHIOLANE 1-OXIDE
Descriptor: 3-BUTYLTHIOLANE 1-OXIDE, LIVER ALCOHOL DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Ramaswamy, S, Plapp, B.V.
Deposit date:1996-11-08
Release date:1997-03-12
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Flexibility of liver alcohol dehydrogenase in stereoselective binding of 3-butylthiolane 1-oxides.
Biochemistry, 36, 1997
6HRJ
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BU of 6hrj by Molmil
Apo - YndL
Descriptor: CITRATE ANION, SULFATE ION, YndL, ...
Authors:Ramaswamy, S, Rasheed, M, Morelli, C, Calvio, C, Sutton, B, Pastore, A.
Deposit date:2018-09-27
Release date:2018-10-10
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The structure of PghL hydrolase bound to its substrate poly-gamma-glutamate.
FEBS J., 285, 2018
6HRI
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BU of 6hri by Molmil
Native YndL
Descriptor: CITRATE ANION, IMIDAZOLE, SULFATE ION, ...
Authors:Ramaswamy, S, Rasheed, M, Morelli, C, Calvio, C, Sutton, B, Pastore, A.
Deposit date:2018-09-27
Release date:2018-10-10
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.03 Å)
Cite:The structure of PghL hydrolase bound to its substrate poly-gamma-glutamate.
FEBS J., 285, 2018
1NDO
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BU of 1ndo by Molmil
NAPHTHALENE 1,2-DIOXYGENASE
Descriptor: FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, NAPHTHALENE 1,2-DIOXYGENASE
Authors:Ramaswamy, S, Kauppi, B, Carredano, E.
Deposit date:1998-01-11
Release date:1999-03-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structure of an aromatic-ring-hydroxylating dioxygenase-naphthalene 1,2-dioxygenase.
Structure, 6, 1998
2I7F
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BU of 2i7f by Molmil
Sphingomonas yanoikuyae B1 ferredoxin
Descriptor: CITRIC ACID, FE2/S2 (INORGANIC) CLUSTER, Ferredoxin component of dioxygenase, ...
Authors:Ramaswamy, S, Brown, E.N.
Deposit date:2006-08-30
Release date:2007-03-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural investigations of the ferredoxin and terminal oxygenase components of the biphenyl 2,3-dioxygenase from Sphingobium yanoikuyae B1.
Bmc Struct.Biol., 7, 2007
4W6Z
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BU of 4w6z by Molmil
YEAST ALCOHOL DEHYDROGENASE I, SACCHAROMYCES CEREVISIAE FERMENTATIVE ENZYME
Descriptor: Alcohol dehydrogenase 1, NICOTINAMIDE-8-IODO-ADENINE-DINUCLEOTIDE, TRIFLUOROETHANOL, ...
Authors:plapp, B.v, savarimuthu, b.r, ramaswamy, s.
Deposit date:2014-08-21
Release date:2014-09-03
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Yeast alcohol dehydrogenase structure and catalysis.
Biochemistry, 53, 2014

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