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PDB: 920 件

7UIY
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ClpAP complex bound to ClpS N-terminal extension, class IIIa
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpA, ATP-dependent Clp protease adapter protein ClpS, ...
著者Kim, S, Fei, X, Sauer, R.T, Baker, T.A.
登録日2022-03-29
公開日2022-10-26
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.22 Å)
主引用文献AAA+ protease-adaptor structures reveal altered conformations and ring specialization.
Nat.Struct.Mol.Biol., 29, 2022
7UIW
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BU of 7uiw by Molmil
ClpAP complex bound to ClpS N-terminal extension, class IIb
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpA, ATP-dependent Clp protease adapter protein ClpS, ...
著者Kim, S, Fei, X, Sauer, R.T, Baker, T.A.
登録日2022-03-29
公開日2022-11-09
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.33 Å)
主引用文献AAA+ protease-adaptor structures reveal altered conformations and ring specialization.
Nat.Struct.Mol.Biol., 29, 2022
7UJ0
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BU of 7uj0 by Molmil
ClpAP complex bound to ClpS N-terminal extension, class IIIb
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpA, ATP-dependent Clp protease adapter protein ClpS, ...
著者Kim, S, Fei, X, Sauer, R.T, Baker, T.A.
登録日2022-03-29
公開日2022-11-09
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.26 Å)
主引用文献AAA+ protease-adaptor structures reveal altered conformations and ring specialization.
Nat.Struct.Mol.Biol., 29, 2022
7UIZ
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BU of 7uiz by Molmil
ClpAP complex bound to ClpS N-terminal extension, class IIc
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpA, ATP-dependent Clp protease adapter protein ClpS, ...
著者Kim, S, Fei, X, Sauer, R.T, Baker, T.A.
登録日2022-03-29
公開日2022-11-09
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.24 Å)
主引用文献AAA+ protease-adaptor structures reveal altered conformations and ring specialization.
Nat.Struct.Mol.Biol., 29, 2022
7UIX
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BU of 7uix by Molmil
ClpAP complex bound to ClpS N-terminal extension, class I
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpA, ATP-dependent Clp protease adapter protein ClpS, ...
著者Kim, S, Fei, X, Sauer, R.T, Baker, T.A.
登録日2022-03-29
公開日2022-11-09
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.24 Å)
主引用文献AAA+ protease-adaptor structures reveal altered conformations and ring specialization.
Nat.Struct.Mol.Biol., 29, 2022
7UIV
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BU of 7uiv by Molmil
ClpAP complex bound to ClpS N-terminal extension, class IIa
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpA, ATP-dependent Clp protease adapter protein ClpS, ...
著者Kim, S, Fei, X, Sauer, R.T, Baker, T.A.
登録日2022-03-29
公開日2022-11-09
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.38 Å)
主引用文献AAA+ protease-adaptor structures reveal altered conformations and ring specialization.
Nat.Struct.Mol.Biol., 29, 2022
4O89
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BU of 4o89 by Molmil
Crystal structure of RtcA, the RNA 3'-terminal phosphate cyclase from Pyrococcus horikoshii.
分子名称: CITRIC ACID, RNA 3'-terminal phosphate cyclase
著者Desai, K.K, Bingman, C.A, Phillips Jr, G.N, Raines, R.T.
登録日2013-12-26
公開日2014-09-10
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of RNA 3'-phosphate cyclase bound to substrate RNA.
Rna, 20, 2014
4OQU
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Structure of the SAM-I/IV riboswitch (env87(deltaU92))
分子名称: MAGNESIUM ION, S-ADENOSYLMETHIONINE, SAM-I/IV riboswitch
著者Trausch, J.J, Reyes, F.E, Edwards, A.L, Batey, R.T.
登録日2014-02-10
公開日2014-06-04
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural basis for diversity in the SAM clan of riboswitches.
Proc.Natl.Acad.Sci.USA, 111, 2014
4OJR
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BU of 4ojr by Molmil
Crystal Structure of the HIV-1 Integrase catalytic domain with GSK1264
分子名称: (2S)-tert-butoxy[4-(8-fluoro-5-methyl-3,4-dihydro-2H-chromen-6-yl)-2-methyl-1-oxo-1,2-dihydroisoquinolin-3-yl]ethanoic acid, CACODYLATE ION, HIV-1 Integrase, ...
著者Gupta, K, Brady, T, Dyer, B, Hwang, Y, Male, F, Nolte, R.T, Wang, L, Velthuisen, E, Jeffrey, J, Van Duyne, G, Bushman, F.D.
登録日2014-01-21
公開日2014-06-11
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Allosteric Inhibition of Human Immunodeficiency Virus Integrase: LATE BLOCK DURING VIRAL REPLICATION AND ABNORMAL MULTIMERIZATION INVOLVING SPECIFIC PROTEIN DOMAINS.
J.Biol.Chem., 289, 2014
4N2P
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Structure of Archease from Pyrococcus horikoshii
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, CALCIUM ION, ...
著者Desai, K.K, Bingman, C.A, Phillips Jr, G.N, Raines, R.T.
登録日2013-10-05
公開日2014-01-01
最終更新日2020-09-23
実験手法X-RAY DIFFRACTION (1.435 Å)
主引用文献A tRNA splicing operon: Archease endows RtcB with dual GTP/ATP cofactor specificity and accelerates RNA ligation.
Nucleic Acids Res., 42, 2014
4PER
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BU of 4per by Molmil
Structure of Gallus gallus ribonuclease inhibitor complexed with Gallus gallus ribonuclease I
分子名称: Angiogenin, Ribonuclease Inhibitor
著者Bianchetti, C.M, Lomax, J.E, Raines, R.T, Fox, B.G.
登録日2014-04-24
公開日2014-06-25
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Functional evolution of ribonuclease inhibitor: insights from birds and reptiles.
J.Mol.Biol., 426, 2014
4PEQ
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BU of 4peq by Molmil
Structure of bovine ribonuclease inhibitor complexed with bovine ribonuclease I
分子名称: Ribonuclease pancreatic, Ribonuclease/angiogenin inhibitor 1
著者Bianchetti, C.M, Lomax, J.E, Raines, R.T, Fox, B.G.
登録日2014-04-24
公開日2014-06-25
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.211 Å)
主引用文献Functional evolution of ribonuclease inhibitor: insights from birds and reptiles.
J.Mol.Biol., 426, 2014
4NEU
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BU of 4neu by Molmil
X-ray structure of Receptor Interacting Protein 1 (RIP1)kinase domain with a 1-aminoisoquinoline inhibitor
分子名称: 1-[4-(1-aminoisoquinolin-5-yl)phenyl]-3-(5-tert-butyl-1,2-oxazol-3-yl)urea, MAGNESIUM ION, Receptor-interacting serine/threonine-protein kinase 1
著者Nolte, R.T, Ward, P, kahler, K.M, Campobasso, N.
登録日2013-10-30
公開日2013-11-20
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.57 Å)
主引用文献Discovery of Small Molecule RIP1 Kinase Inhibitors for the Treatment of Pathologies Associated with Necroptosis.
ACS Med Chem Lett, 4, 2013
4NLA
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BU of 4nla by Molmil
Structure of the central NEAT domain, N2, of the listerial Hbp2 protein, apo form
分子名称: Iron-regulated surface determinant protein A, SULFATE ION
著者Malmirchegini, G.R, Sawaya, M.R, Clubb, R.T.
登録日2013-11-14
公開日2014-10-22
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Novel Mechanism of Hemin Capture by Hbp2, the Hemoglobin-binding Hemophore from Listeria monocytogenes.
J.Biol.Chem., 289, 2014
4MYP
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BU of 4myp by Molmil
Structure of the central NEAT domain, N2, of the listerial Hbp2 protein complexed with heme
分子名称: GLYCEROL, Iron-regulated surface determinant protein A, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Malmirchegini, G.R, Sawaya, M.R, Clubb, R.T.
登録日2013-09-27
公開日2014-10-22
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Novel Mechanism of Hemin Capture by Hbp2, the Hemoglobin-binding Hemophore from Listeria monocytogenes.
J.Biol.Chem., 289, 2014
4Q2Z
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BU of 4q2z by Molmil
Fab fragment of HIV vaccine-elicited CD4bs-directed antibody, GE356, from a non-human primate
分子名称: Heavy chain of Fab fragment of HIV vaccine-elicited CD4bs-directed antibody, Light chain of Fab fragment of HIV vaccine-elicited CD4bs-directed antibody
著者Navis, M, Tran, K, Bale, S, Phad, G, Guenaga, J, Wilson, R, Soldemo, M, McKee, K, Sundling, C, Mascola, J, Li, Y, Wyatt, R.T, Hedestam, G.B.K.
登録日2014-04-10
公開日2014-09-17
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献HIV-1 Receptor Binding Site-Directed Antibodies Using a VH1-2 Gene Segment Orthologue Are Activated by Env Trimer Immunization.
Plos Pathog., 10, 2014
4O8J
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BU of 4o8j by Molmil
Crystal structure of RtcA, the RNA 3'-terminal phosphate cyclase from Pyrococcus horikoshii, in complex with rACAAA3'phosphate and adenine.
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ADENOSINE, RNA, ...
著者Desai, K.K, Bingman, C.A, Phillips Jr, G.N, Raines, R.T.
登録日2013-12-27
公開日2014-09-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Structure of RNA 3'-phosphate cyclase bound to substrate RNA.
Rna, 20, 2014
4R0D
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BU of 4r0d by Molmil
Crystal structure of a eukaryotic group II intron lariat
分子名称: GROUP IIB INTRON LARIAT, IRIDIUM HEXAMMINE ION, LIGATED EXONS, ...
著者Robart, A.R, Chan, R.T, Peters, J.K, Rajashankar, K.R, Toor, N.
登録日2014-07-30
公開日2014-10-01
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.676 Å)
主引用文献Crystal structure of a eukaryotic group II intron lariat.
Nature, 514, 2014
4W4R
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BU of 4w4r by Molmil
Crystal structure of ent-kaurene synthase BJKS from bradyrhizobium japonicum
分子名称: Uncharacterized protein blr2150
著者Liu, W, Zheng, Y, Huang, C.H, Ko, T.P, Guo, R.T.
登録日2014-08-15
公開日2015-01-14
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Structure, function and inhibition of ent-kaurene synthase from Bradyrhizobium japonicum.
Sci Rep, 4, 2014
3O1F
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BU of 3o1f by Molmil
P1 crystal form of E. coli ClpS at 1.4 A resolution
分子名称: ATP-dependent Clp protease adapter protein clpS
著者Roman-Hernandez, G, Hou, J.Y, Grant, R.A, Sauer, R.T, Baker, T.A.
登録日2010-07-21
公開日2011-07-27
最終更新日2017-11-08
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献The ClpS Adaptor Mediates Staged Delivery of N-End Rule Substrates to the AAA+ ClpAP Protease.
Mol.Cell, 43, 2011
4WOQ
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Crystal Structures of CdNal from Clostridium difficile in complex with ketobutyric
分子名称: 2-KETOBUTYRIC ACID, N-acetylneuraminate lyase
著者Liu, W.D, Guo, R.T, Cui, Y.F, Chen, X, Wu, Q.Q, Zhu, D.M.
登録日2014-10-16
公開日2015-10-21
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal Structures of CdNal from Clostridium difficile in complex with ketobutyric
to be published
4WOZ
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Crystal Structures of CdNal from Clostridium difficile in complex with mannosamine
分子名称: 2-(ACETYLAMINO)-2-DEOXY-D-MANNOSE, N-acetylneuraminate lyase
著者Liu, W.D, Guo, R.T, Cui, Y.F, Chen, X, Wu, Q.Q, Zhu, D.M.
登録日2014-10-17
公開日2015-10-21
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Crystal Structures of CdNal from Clostridium difficile in complex with mannosamine
to be published
2QAS
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Crystal structure of Caulobacter crescentus SspB ortholog
分子名称: C. crescentus ssrA peptide, Hypothetical protein
著者Chien, P, Grant, R.A, Sauer, R.T, Baker, T.A.
登録日2007-06-15
公開日2007-09-04
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Crystal structure of Caulobacter crescentus SspB ortholog
To be Published
2QF3
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Structure of the delta PDZ truncation of the DegS protease
分子名称: PHOSPHATE ION, Protease degS
著者Sohn, J, Grant, R.A, Sauer, R.T.
登録日2007-06-26
公開日2007-12-11
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Allosteric activation of DegS, a stress sensor PDZ protease.
Cell(Cambridge,Mass.), 131, 2007
3NPQ
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Structure of the S-adenosylhomocysteine riboswitch at 2.18 A
分子名称: COBALT HEXAMMINE(III), S-ADENOSYL-L-HOMOCYSTEINE, S-ADENOSYLHOMOCYSTEINE RIBOSWITCH
著者Reyes, F.E, Edwards, A.E, Batey, R.T.
登録日2010-06-28
公開日2010-10-06
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.1814 Å)
主引用文献Structural basis for recognition of S-adenosylhomocysteine by riboswitches.
Rna, 16, 2010

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件を2024-07-24に公開中

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