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PDB: 2341 results

3F7D
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BU of 3f7d by Molmil
SF-1 LBD bound by phosphatidylcholine
Descriptor: (2S)-2-{[(1R)-1-hydroxyhexadecyl]oxy}-3-{[(1R)-1-hydroxyoctadecyl]oxy}propyl 2-(trimethylammonio)ethyl phosphate, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, nuclear receptor SF-1
Authors:Sablin, E.P, Fletterick, R.J.
Deposit date:2008-11-07
Release date:2008-12-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of SF-1 bound by different phospholipids: evidence for regulatory ligands.
Mol.Endocrinol., 23, 2009
3FOO
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BU of 3foo by Molmil
A Triangular Cytochrome b562 Superstructure Mediated by Ni Coordination - Monoclinic Form
Descriptor: N-1,10-phenanthrolin-5-ylacetamide, NICKEL (II) ION, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Radford, R.J, Tezcan, F.A.
Deposit date:2008-12-30
Release date:2009-07-14
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:A superprotein triangle driven by nickel(II) coordination: exploiting non-natural metal ligands in protein self-assembly
J.Am.Chem.Soc., 131, 2009
1QY2
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BU of 1qy2 by Molmil
Thermodynamics of Binding of 2-methoxy-3-isopropylpyrazine and 2-methoxy-3-isobutylpyrazine to the Major Urinary Protein
Descriptor: 2-ISOPROPYL-3-METHOXYPYRAZINE, CADMIUM ION, Major Urinary Protein, ...
Authors:Bingham, R.J, Findlay, J.B.C, Hsieh, S.-Y, Kalverda, A.P, Kjellberg, A, Perazzolo, C, Phillips, S.E.V, Seshadri, K, Trinh, C.H, Turnbull, W.B, Bodenhausen, G, Homans, S.W.
Deposit date:2003-09-09
Release date:2004-02-24
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Thermodynamics of Binding of 2-Methoxy-3-isopropylpyrazine and 2-Methoxy-3-isobutylpyrazine to the Major Urinary Protein.
J.Am.Chem.Soc., 126, 2004
3L1M
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BU of 3l1m by Molmil
Crystal Structure of a Ni-directed Dimer of Cytochrome cb562 with a Quinolate-Histidine Hybrid Coordination Motif
Descriptor: N-(8-hydroxyquinolin-5-yl)acetamide, NICKEL (II) ION, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Radford, R.J, Tezcan, F.A.
Deposit date:2009-12-13
Release date:2010-04-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Controlled protein dimerization through hybrid coordination motifs.
Inorg.Chem., 49, 2010
3KP9
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BU of 3kp9 by Molmil
Structure of a bacterial homolog of vitamin K epoxide reductase
Descriptor: MERCURY (II) ION, UBIQUINONE-10, VKORC1/thioredoxin domain protein
Authors:Li, W, Schulman, S, Dutton, R.J, Boyd, D, Beckwith, J, Rapoport, T.A.
Deposit date:2009-11-16
Release date:2010-02-09
Last modified:2021-10-13
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structure of a bacterial homologue of vitamin K epoxide reductase.
Nature, 463, 2010
1QY1
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BU of 1qy1 by Molmil
Thermodynamics of Binding of 2-methoxy-3-isopropylpyrazine and 2-methoxy-3-isobutylpyrazine to the Major Urinary Protein
Descriptor: 2-ISOBUTYL-3-METHOXYPYRAZINE, CADMIUM ION, Major Urinary Protein, ...
Authors:Bingham, R.J, Findlay, J.B.C, Hsieh, S.-Y, Kalverda, A.P, Kjellberg, A, Perazzolo, C, Phillips, S.E.V, Seshadri, K, Trinh, C.H, Turnbull, W.B, Bodenhausen, G, Homans, S.W.
Deposit date:2003-09-09
Release date:2004-02-24
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Thermodynamics of Binding of 2-Methoxy-3-isopropylpyrazine and 2-Methoxy-3-isobutylpyrazine to the Major Urinary Protein.
J.Am.Chem.Soc., 126, 2004
3KP8
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The thioredoxin-like domain of a VKOR homolog from Synechococcus sp.
Descriptor: VKORC1/thioredoxin domain protein
Authors:Li, W, Schulman, S, Dutton, R.J, Boyd, D, Beckwith, J, Rapoport, T.A.
Deposit date:2009-11-15
Release date:2010-03-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Structure of a bacterial homologue of vitamin K epoxide reductase.
Nature, 463, 2010
1QGF
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BU of 1qgf by Molmil
PORCINE PANCREATIC ELASTASE COMPLEXED WITH (3R, 4S)N-PARA-TOLUENESULPHONYL-3-ETHYL-4-(CARBOXYLIC ACID)PYRROLIDIN-2-ONE
Descriptor: (2S,3S)-3-FORMYL-2-({[(4-METHYLPHENYL)SULFONYL]AMINO}METHYL)PENTANOIC ACID, CALCIUM ION, ELASTASE, ...
Authors:Wilmouth, R.C, Kassamally, S, Westwood, N.J, Sheppard, R.J, Claridge, T.D.W, Wright, P.A, Pritchard, G.J, Schofield, C.J.
Deposit date:1999-04-27
Release date:1999-12-29
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Mechanistic insights into the inhibition of serine proteases by monocyclic lactams.
Biochemistry, 38, 1999
3L0H
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BU of 3l0h by Molmil
Crystal Structure Analysis of W21A mutant of human GSTA1-1 in complex with S-hexylglutathione
Descriptor: Glutathione S-transferase A1, S-HEXYLGLUTATHIONE
Authors:Fanucchi, S, Achilonu, I.A, Adamson, R.J, Fernandes, M.A, Burke, J.P, Dirr, H.W.
Deposit date:2009-12-10
Release date:2010-01-12
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Stability of the domain interface contributes towards the catalytic function at the H-site of class alpha glutathione transferase A1-1.
Biochim.Biophys.Acta, 1804, 2010
3KJJ
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Crystal structure of NMB1025, a member of YjgF protein family, from Neisseria meningitidis (hexagonal crystal form)
Descriptor: GLYCEROL, NMB1025 protein
Authors:Ren, J, Sainsbury, S, Owens, R.J, Oxford Protein Production Facility (OPPF)
Deposit date:2009-11-03
Release date:2009-11-24
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of NMB1025, a member of YjgF protein family, from Neisseria meningitidis
To be Published
3GYU
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BU of 3gyu by Molmil
Nuclear receptor DAF-12 from parasitic nematode Strongyloides stercoralis in complex with its physiological ligand dafachronic acid delta 7
Descriptor: (5beta,14beta,17alpha,25R)-3-oxocholest-7-en-26-oic acid, Nuclear hormone receptor of the steroid/thyroid hormone receptors superfamily, SRC1
Authors:Zhou, X.E, Wang, Z, Suino-Powell, K, Motola, D.L, Conneely, A, Ogata, C, Sharma, K.K, Auchus, R.J, Kliewer, S.A, Xu, H.E, Mangelsdorf, D.J.
Deposit date:2009-04-05
Release date:2009-07-07
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Identification of the nuclear receptor DAF-12 as a therapeutic target in parasitic nematodes.
Proc.Natl.Acad.Sci.USA, 106, 2009
6HTS
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BU of 6hts by Molmil
Cryo-EM structure of the human INO80 complex bound to nucleosome
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin-related protein 5, Chromatin-remodeling ATPase INO80, ...
Authors:Ayala, R, Willhoft, O, Aramayo, R.J, Wilkinson, M, McCormack, E.A, Ocloo, L, Wigley, D.B, Zhang, X.
Deposit date:2018-10-04
Release date:2018-11-07
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:Structure and regulation of the human INO80-nucleosome complex.
Nature, 556, 2018
3LX5
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BU of 3lx5 by Molmil
Crystal structure of mGMPPNP-bound NFeoB from S. thermophilus
Descriptor: 2-amino-9-(5-O-[(R)-hydroxy{[(R)-hydroxy(phosphonoamino)phosphoryl]oxy}phosphoryl]-3-O-{[2-(methylamino)phenyl]carbonyl}-beta-D-erythro-pentofuranosyl-2-ulose)-1,9-dihydro-6H-purin-6-one, Ferrous iron uptake transporter protein B, GLYCEROL, ...
Authors:Ash, M.R, Guilfoyle, A, Maher, M.J, Clarke, R.J, Guss, J.M, Jormakka, M.
Deposit date:2010-02-24
Release date:2010-03-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Potassium-activated GTPase reaction in the G Protein-coupled ferrous iron transporter B.
J.Biol.Chem., 285, 2010
6HUF
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BU of 6huf by Molmil
Coping with strong translational non-crystallographic symmetry and extreme anisotropy in molecular replacement with Phaser: human Rab27a
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, Ras-related protein Rab-27A
Authors:Jamshidiha, M, Perez-Dorado, I, Murray, J.W, Tate, E.W, Cota, E, Read, R.J.
Deposit date:2018-10-08
Release date:2019-03-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.82 Å)
Cite:Coping with strong translational noncrystallographic symmetry and extreme anisotropy in molecular replacement with Phaser: human Rab27a.
Acta Crystallogr D Struct Biol, 75, 2019
1QMP
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BU of 1qmp by Molmil
Phosphorylated aspartate in the crystal structure of the sporulation response regulator, Spo0A
Descriptor: CALCIUM ION, Stage 0 sporulation protein A
Authors:Lewis, R.J, Brannigan, J.A, Muchova, K, Barak, I, Wilkinson, A.J.
Deposit date:1999-10-04
Release date:1999-11-14
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Phosphorylated aspartate in the structure of a response regulator protein.
J. Mol. Biol., 294, 1999
6I52
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BU of 6i52 by Molmil
Yeast RPA bound to ssDNA
Descriptor: DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), Replication factor A protein 1, Replication factor A protein 2, ...
Authors:Yates, L.A, Aramayo, R.J, Zhang, X.
Deposit date:2018-11-12
Release date:2018-12-19
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4.7 Å)
Cite:A structural and dynamic model for the assembly of Replication Protein A on single-stranded DNA.
Nat Commun, 9, 2018
6I22
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BU of 6i22 by Molmil
Flavin Analogue Sheds Light on Light-Oxygen-Voltage Domain Mechanism
Descriptor: Aureochrome1-like protein, FLAVIN MONONUCLEOTIDE
Authors:Rizkallah, P.J, Kalvaitis, M.E, Allemann, R.K, Mart, R.J, Johnson, L.A.
Deposit date:2018-10-31
Release date:2019-05-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:A Noncanonical Chromophore Reveals Structural Rearrangements of the Light-Oxygen-Voltage Domain upon Photoactivation.
Biochemistry, 58, 2019
6I21
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BU of 6i21 by Molmil
Flavin Analogue Sheds Light on Light-Oxygen-Voltage Domain Mechanism
Descriptor: 1,2-ETHANEDIOL, Aureochrome1-like protein, CHLORIDE ION, ...
Authors:Rizkallah, P.J, Kalvaitis, M.E, Allemann, R.K, Mart, R.J, Johnson, L.A.
Deposit date:2018-10-31
Release date:2019-05-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:A Noncanonical Chromophore Reveals Structural Rearrangements of the Light-Oxygen-Voltage Domain upon Photoactivation.
Biochemistry, 58, 2019
6I24
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BU of 6i24 by Molmil
Flavin Analogue Sheds Light on Light-Oxygen-Voltage Domain Mechanism
Descriptor: 1,2-ETHANEDIOL, 1-deoxy-1-(7,8-dimethyl-2,4-dioxo-3,4-dihydropyrimido[4,5-b]quinolin-10(2H)-yl)-5-O-phosphono-D-ribitol, ACETATE ION, ...
Authors:Rizkallah, P.J, Kalvaitis, M.E, Allemann, R.K, Mart, R.J, Johnson, L.A.
Deposit date:2018-10-31
Release date:2019-05-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:A Noncanonical Chromophore Reveals Structural Rearrangements of the Light-Oxygen-Voltage Domain upon Photoactivation.
Biochemistry, 58, 2019
6I20
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BU of 6i20 by Molmil
Flavin Analogue Sheds Light on Light-Oxygen-Voltage Domain Mechanism
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ACETATE ION, ...
Authors:Rizkallah, P.J, Kalvaitis, M.E, Allemann, R.K, Mart, R.J, Johnson, L.A.
Deposit date:2018-10-31
Release date:2019-05-29
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:A Noncanonical Chromophore Reveals Structural Rearrangements of the Light-Oxygen-Voltage Domain upon Photoactivation.
Biochemistry, 58, 2019
6I7J
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BU of 6i7j by Molmil
Crystal structure of monomeric FICD mutant L258D
Descriptor: Adenosine monophosphate-protein transferase FICD, DI(HYDROXYETHYL)ETHER, PENTAETHYLENE GLYCOL, ...
Authors:Perera, L.A, Yan, Y, Read, R.J, Ron, D.
Deposit date:2018-11-16
Release date:2019-09-25
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:An oligomeric state-dependent switch in the ER enzyme FICD regulates AMPylation and deAMPylation of BiP.
Embo J., 38, 2019
6I7K
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BU of 6i7k by Molmil
Crystal structure of monomeric FICD mutant L258D complexed with MgATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Adenosine monophosphate-protein transferase FICD, ETHANOL, ...
Authors:Perera, L.A, Yan, Y, Read, R.J, Ron, D.
Deposit date:2018-11-16
Release date:2019-09-25
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:An oligomeric state-dependent switch in the ER enzyme FICD regulates AMPylation and deAMPylation of BiP.
Embo J., 38, 2019
3HEA
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BU of 3hea by Molmil
The L29P/L124I mutation of Pseudomonas fluorescens esterase
Descriptor: Arylesterase, ETHYL ACETATE, GLYCEROL, ...
Authors:Kazlauskas, R.J, Schrag, J.D, Cheeseman, J.D, Morley, K.L.
Deposit date:2009-05-08
Release date:2010-03-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Switching catalysis from hydrolysis to perhydrolysis in Pseudomonas fluorescens esterase.
Biochemistry, 49, 2010
3HHF
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BU of 3hhf by Molmil
Structure of CrgA regulatory domain, a LysR-type transcriptional regulator from Neisseria meningitidis.
Descriptor: CHLORIDE ION, Transcriptional regulator, LysR family
Authors:Sainsbury, S, Ren, J, Owens, R.J, Stuart, D.I, Oxford Protein Production Facility (OPPF)
Deposit date:2009-05-15
Release date:2009-07-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The structure of CrgA from Neisseria meningitidis reveals a new octameric assembly state for LysR transcriptional regulators
Nucleic Acids Res., 37, 2009
1RPL
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BU of 1rpl by Molmil
2.3 ANGSTROMS CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF DNA POLYMERASE BETA
Descriptor: DNA POLYMERASE BETA
Authors:Davies II, J.F, Almassy, R.J.
Deposit date:1994-10-25
Release date:1995-01-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:2.3 A crystal structure of the catalytic domain of DNA polymerase beta.
Cell(Cambridge,Mass.), 76, 1994

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