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PDB: 17 件
8Q2G
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BU of 8q2g by Molmil
X-ray structure of LysECD7 endolysin against Gram-negative bacteria
分子名称: Peptidoglycan L-alanyl-D-glutamate endopeptidase
著者Prudnikova, T, Grinkevich, P, Vasina, D.V.
登録日2023-08-02
公開日2024-07-31
最終更新日2024-08-07
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Development of novel antimicrobials with engineered endolysin LysECD7-SMAP to combat Gram-negative bacterial infections.
J.Biomed.Sci., 31, 2024
4K2A
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BU of 4k2a by Molmil
Crystal structure of haloalkane dehalogenase DbeA from Bradyrhizobium elkani USDA94
分子名称: ACETATE ION, CHLORIDE ION, Haloalkane dehalogenase
著者Prudnikova, T, Chaloupkova, R, Rezacova, P, Mozga, T, Koudelakova, T, Sato, Y, Kuty, M, Nagata, Y, Damborsky, J, Kuta Smatanova, I, Structure 2 Function Project (S2F)
登録日2013-04-08
公開日2014-06-25
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural and functional analysis of a novel haloalkane dehalogenase with two halide-binding sites.
Acta Crystallogr.,Sect.D, 70, 2014
6XY9
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Crystal structure of haloalkane dehalogenase DbeA-M1 loop variant from Bradyrhizobium elkanii
分子名称: ACETATE ION, CHLORIDE ION, Haloalkane dehalogenase
著者Prudnikova, T, Rezacova, P, Kuta Smatanova, I, Chaloupkova, R, Damborsky, J.
登録日2020-01-29
公開日2020-07-22
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural and catalytic effects of surface loop-helix transplantation within haloalkane dehalogenase family.
Comput Struct Biotechnol J, 18, 2020
7YYG
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BU of 7yyg by Molmil
Crystal structure of gatekeeper of type III secretion system in Bordetella BopN
分子名称: ACETATE ION, CALCIUM ION, CHLORIDE ION, ...
著者Prudnikova, T, Kuta Smatanova, I, Kamanova, J, Bumba, L.
登録日2022-02-17
公開日2023-03-01
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献BopN is a Gatekeeper of the Bordetella Type III Secretion System.
Microbiol Spectr, 11, 2023
4WCV
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BU of 4wcv by Molmil
Haloalkane dehalogenase DhaA mutant from Rhodococcus rhodochrous (T148L+G171Q+A172V+C176G)
分子名称: ACETATE ION, CHLORIDE ION, Haloalkane dehalogenase, ...
著者Holubeva, T, Prudnikova, T, Kuta-Smatanova, I, Rezacova, P.
登録日2014-09-05
公開日2014-10-15
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Balancing the stability-activity trade-off by fine-tuning dehalogenase access tunnels
Chemcatchem, 2015
7O3O
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BU of 7o3o by Molmil
Structure of haloalkane dehalogenase mutant DhaA80(T148L, G171Q, A172V, C176F) from Rhodococcus rhodochrous with ionic liquid
分子名称: CHLORIDE ION, ETHANOLAMINE, Haloalkane dehalogenase
著者Shaposhnikova, A, Prudnikova, T, Kuta Smatanova, I.
登録日2021-04-02
公開日2021-09-08
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Stabilization of Haloalkane Dehalogenase Structure by Interfacial Interaction with Ionic Liquids
Crystals, 11, 2021
7O8B
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Structure of haloalkane dehalogenase variant DhaA80 from Rhodococcus rhodochrous
分子名称: Haloalkane dehalogenase, methyl sulfate
著者Shaposhnikova, A, Prudnikova, T, Kuta Smatanova, I.
登録日2021-04-15
公開日2021-09-08
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Stabilization of Haloalkane Dehalogenase Structure by Interfacial Interaction with Ionic Liquids
Crystals, 11, 2021
6IAH
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Phosphatase Tt82 from Thermococcus thioreducens
分子名称: CHLORIDE ION, Hydrolase, MAGNESIUM ION
著者Havlickova, P, Brinsa, V, Brynda, J, Pachl, P, Prudnikova, T, Mesters, J.R, Kascakova, B, Kuty, M, Pusey, M.L, Ng, J.D, Rezacova, P, Smatanova, I.K.
登録日2018-11-26
公開日2019-08-14
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献A novel structurally characterized haloacid dehalogenase superfamily phosphatase from Thermococcus thioreducens with diverse substrate specificity.
Acta Crystallogr D Struct Biol, 75, 2019
6F9O
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Crystal structure of cold-adapted haloalkane dehalogenase DpcA from Psychrobacter cryohalolentis K5
分子名称: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, Haloalkane dehalogenase, ...
著者Tratsiak, K, Prudnikova, T, Drienovska, I, Damborsky, J, Brynda, J, Pachl, P, Kuty, M, Chaloupkova, R, Kuta Smatanova, I, Rezacova, P.
登録日2017-12-15
公開日2019-02-27
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Crystal structure of the cold-adapted haloalkane dehalogenase DpcA from Psychrobacter cryohalolentis K5.
Acta Crystallogr.,Sect.F, 75, 2019
7PW1
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BU of 7pw1 by Molmil
Crystal structure of ancestral haloalkane dehalogenase AncLinB-DmbA
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Haloalkane dehalogenase, ...
著者Mazur, A, Grinkevich, P, Prudnikova, T.
登録日2021-10-05
公開日2022-04-06
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural Analysis of the Ancestral Haloalkane Dehalogenase AncLinB-DmbA.
Int J Mol Sci, 22, 2021
5MXP
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Haloalkane dehalogenase DmxA from Marinobacter sp. ELB17 possessing a unique catalytic residue
分子名称: ACETATE ION, Alpha/beta hydrolase, SODIUM ION
著者Tratsiak, K, Rezacova, P, Prudnikova, T.
登録日2017-01-24
公開日2018-07-25
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Deciphering the Structural Basis of High Thermostability of Dehalogenase from Psychrophilic BacteriumMarinobactersp. ELB17.
Microorganisms, 7, 2019
7AL0
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Crystal Structure of Heymonin, a Novel Frog-derived Peptide
分子名称: CHLORIDE ION, Heymonin
著者Kascakova, B, Prudnikova, T, Kuta Smatanova, I, Xu, X.
登録日2020-10-03
公開日2021-04-21
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Characterization and functional analysis of cathelicidin-MH, a novel frog-derived peptide with anti-septicemic properties.
Elife, 10, 2021
7ZBF
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BU of 7zbf by Molmil
Crystal structure of native Iripin-4 serpin from tick Ixodes ricinus
分子名称: Iripin-4 serpin, NICKEL (II) ION
著者Kascakova, B, Kuta Smatanova, I, Chmelar, J, Prudnikova, T.
登録日2022-03-23
公開日2023-04-05
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Conformational transition of the Ixodes ricinus salivary serpin Iripin-4.
Acta Crystallogr D Struct Biol, 79, 2023
7ZAS
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BU of 7zas by Molmil
Crystal structure of cleaved Iripin-4 serpin from tick Ixodes ricinus
分子名称: CHLORIDE ION, Iripin-4 serpin
著者Kascakova, B, Kuta Smatanova, I, Chmelar, J, Prudnikova, T.
登録日2022-03-22
公開日2023-03-29
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Conformational transition of the Ixodes ricinus salivary serpin Iripin-4.
Acta Crystallogr D Struct Biol, 79, 2023
7AHP
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Crystal structure of Ixodes ricinus serpin - Iripin-3
分子名称: Putative salivary serpin, TRIS-HYDROXYMETHYL-METHYL-AMMONIUM
著者Kascakova, B, Kuta Smatanova, I, Prudnikova, T.
登録日2020-09-25
公開日2021-03-10
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Iripin-3, a New Salivary Protein Isolated From Ixodes ricinus Ticks, Displays Immunomodulatory and Anti-Hemostatic Properties In Vitro
Front Immunol, 12, 2021
7AVR
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BU of 7avr by Molmil
The tetrameric structure of haloalkane dehalogenase DpaA from Paraglaciecola agarilytica NO2
分子名称: CHLORIDE ION, Haloalkane dehalogenase 1
著者Mazur, A, Kolenko, P, Prudnikova, T, Grinkevich, P, Kuta Smatanova, I.
登録日2020-11-05
公開日2021-03-17
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The tetrameric structure of the novel haloalkane dehalogenase DpaA from Paraglaciecola agarilytica NO2.
Acta Crystallogr D Struct Biol, 77, 2021
7QTZ
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BU of 7qtz by Molmil
Crystal structure of Iripin-1 serpin from tick Ixodes ricinus
分子名称: MAGNESIUM ION, Putative salivary serpin
著者Kascakova, B, Kuta Smatanova, I, Chmelar, J, Prudnikova, T.
登録日2022-01-17
公開日2023-01-25
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Iripin-1, a new anti-inflammatory tick serpin, inhibits leukocyte recruitment in vivo while altering the levels of chemokines and adhesion molecules.
Front Immunol, 14, 2023

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件を2024-11-06に公開中

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