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PDB: 54 results

3UMT
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BU of 3umt by Molmil
scFv12, Anti-BclA antibody single chain variable fragment
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, scFv heavy chain and light chain
Authors:Pokkuluri, P.R.
Deposit date:2011-11-14
Release date:2012-11-14
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.798 Å)
Cite:Systematic stability engineering of single-chain antibodies
To be Published
3H33
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BU of 3h33 by Molmil
PpcC, A cytochrome c7 from Geobacter sulfurreducens
Descriptor: Cytochrome c7, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Pokkuluri, P.R, Schiffer, M.
Deposit date:2009-04-15
Release date:2009-12-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural characterization of a family of cytochromes c(7) involved in Fe(III) respiration by Geobacter sulfurreducens.
Biochim.Biophys.Acta, 1797, 2010
3H34
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PpcE, A cytochrome c7 from Geobacter sulfurreducens
Descriptor: Cytochrome c7, PROTOPORPHYRIN IX CONTAINING FE
Authors:Pokkuluri, P.R, Schiffer, M.
Deposit date:2009-04-15
Release date:2009-12-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural characterization of a family of cytochromes c(7) involved in Fe(III) respiration by Geobacter sulfurreducens.
Biochim.Biophys.Acta, 1797, 2010
1RWJ
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BU of 1rwj by Molmil
c7-type three-heme cytochrome domain
Descriptor: Cytochrome c family protein, HEME C
Authors:Pokkuluri, P.R, Londer, Y.Y, Duke, N.E.C, Erickson, J, Pessanha, M, Salgueiro, C.A, Schiffer, M.
Deposit date:2003-12-16
Release date:2004-08-03
Last modified:2021-03-03
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of a novel c7-type three-heme cytochrome domain from a multidomain cytochrome c polymer.
Protein Sci., 13, 2004
2CD0
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BU of 2cd0 by Molmil
STRUCTURE OF HUMAN LAMBDA-6 LIGHT CHAIN DIMER WIL
Descriptor: PROTEIN (BENCE-JONES PROTEIN WIL, A VARIABLE DOMAIN FROM LAMBDA-6 TYPE IMMUNOGLOBULIN LIGHT CHAIN)
Authors:Pokkuluri, P.R, Solomon, A, Weiss, D.T, Stevens, F.J, Schiffer, M.
Deposit date:1999-03-08
Release date:2000-03-08
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Tertiary structure of human lambda 6 light chains.
Amyloid, 6, 1999
6NEX
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BU of 6nex by Molmil
Fab fragment of anti-cocaine antibody h2E2
Descriptor: ACETATE ION, Anitgen binding fragment light chain, Antigen binding fragment heavy chain, ...
Authors:Pokkuluri, P.R, Tan, K.
Deposit date:2018-12-18
Release date:2019-11-20
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural analysis of free and liganded forms of the Fab fragment of a high-affinity anti-cocaine antibody, h2E2.
Acta Crystallogr.,Sect.F, 75, 2019
6NFN
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BU of 6nfn by Molmil
Fab fragment of anti-cocaine antibody h2E2 bound to benzoylecgonine
Descriptor: 3-(BENZOYLOXY)-8-METHYL-8-AZABICYCLO[3.2.1]OCTANE-2-CARBOXYLIC ACID, ACETATE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Pokkuluri, P.R, Tan, K.
Deposit date:2018-12-20
Release date:2019-11-20
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.63 Å)
Cite:Structural analysis of free and liganded forms of the Fab fragment of a high-affinity anti-cocaine antibody, h2E2.
Acta Crystallogr.,Sect.F, 75, 2019
3OUQ
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Structure of N-terminal hexaheme fragment of GSU1996
Descriptor: Cytochrome c family protein, HEME C
Authors:Pokkuluri, P.R, Schiffer, M.
Deposit date:2010-09-15
Release date:2010-12-29
Last modified:2021-03-03
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of a novel dodecaheme cytochrome c from Geobacter sulfurreducens reveals an extended 12nm protein with interacting hemes.
J.Struct.Biol., 174, 2011
3OUE
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BU of 3oue by Molmil
Structure of C-terminal hexaheme fragment of GSU1996
Descriptor: Cytochrome c family protein, HEME C, SULFATE ION
Authors:Pokkuluri, P.R, Schiffer, M.
Deposit date:2010-09-14
Release date:2010-12-29
Last modified:2021-03-03
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structure of a novel dodecaheme cytochrome c from Geobacter sulfurreducens reveals an extended 12nm protein with interacting hemes.
J.Struct.Biol., 174, 2011
3OV0
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BU of 3ov0 by Molmil
Structure of dodecaheme cytochrome c GSU1996
Descriptor: Cytochrome c family protein, HEME C
Authors:Pokkuluri, P.R, Schiffer, M.
Deposit date:2010-09-15
Release date:2010-12-29
Last modified:2021-03-03
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structure of a novel dodecaheme cytochrome c from Geobacter sulfurreducens reveals an extended 12nm protein with interacting hemes.
J.Struct.Biol., 174, 2011
4RLR
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BU of 4rlr by Molmil
Structure of monoheme cytochrome PccH from Geobacter sulfurreducens
Descriptor: ACETATE ION, CACODYLATE ION, Cytochrome c, ...
Authors:Pokkuluri, P.R, Salgueiro, C.A.
Deposit date:2014-10-17
Release date:2015-04-01
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:The structure of PccH from Geobacter sulfurreducens - a novel low reduction potential monoheme cytochrome essential for accepting electrons from an electrode.
Febs J., 282, 2015
1CD0
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BU of 1cd0 by Molmil
STRUCTURE OF HUMAN LAMDA-6 LIGHT CHAIN DIMER JTO
Descriptor: PROTEIN (JTO, A VARIABLE DOMAIN FROM LAMBDA-6 TYPE IMMUNOGLOBULIN LIGHT CHAIN)
Authors:Pokkuluri, P.R, Solomon, A, Weiss, D.T, Stevens, F.J, Schiffer, M.
Deposit date:1999-03-05
Release date:2000-03-06
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Tertiary structure of human lambda 6 light chains.
Amyloid, 6, 1999
6U97
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BU of 6u97 by Molmil
Structure of OmcF_H47I mutant
Descriptor: Lipoprotein cytochrome c, 1 heme-binding site, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Pokkuluri, P.R.
Deposit date:2019-09-06
Release date:2020-02-19
Method:X-RAY DIFFRACTION (1.13 Å)
Cite:Modulation of the Redox Potential and Electron/Proton Transfer Mechanisms in the Outer Membrane Cytochrome OmcF FromGeobacter sulfurreducens.
Front Microbiol, 10, 2019
3B47
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BU of 3b47 by Molmil
Periplasmic sensor domain of chemotaxis protein GSU0582
Descriptor: Methyl-accepting chemotaxis protein, PROTOPORPHYRIN IX CONTAINING FE
Authors:Pokkuluri, P.R, Schiffer, M.
Deposit date:2007-10-23
Release date:2008-04-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures and solution properties of two novel periplasmic sensor domains with c-type heme from chemotaxis proteins of Geobacter sulfurreducens: implications for signal transduction.
J.Mol.Biol., 377, 2008
3B42
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BU of 3b42 by Molmil
Periplasmic sensor domain of chemotaxis protein GSU0935
Descriptor: Methyl-accepting chemotaxis protein, putative, PROTOPORPHYRIN IX CONTAINING FE
Authors:Pokkuluri, P.R, Schiffer, M.
Deposit date:2007-10-23
Release date:2008-04-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures and solution properties of two novel periplasmic sensor domains with c-type heme from chemotaxis proteins of Geobacter sulfurreducens: implications for signal transduction.
J.Mol.Biol., 377, 2008
3BXU
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BU of 3bxu by Molmil
PpcB, A Cytochrome c7 from Geobacter sulfurreducens
Descriptor: Cytochrome c3, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Pokkuluri, P.R, Schiffer, M.
Deposit date:2008-01-14
Release date:2008-07-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structural insights into the modulation of the redox properties of two Geobacter sulfurreducens homologous triheme cytochromes.
Biochim.Biophys.Acta, 1777, 2008
1K6L
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BU of 1k6l by Molmil
Photosynethetic Reaction Center from Rhodobacter sphaeroides
Descriptor: BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, CARDIOLIPIN, ...
Authors:Pokkuluri, P.R, Laible, P.D, Deng, Y.-L, Wong, T.N, Hanson, D.K, Schiffer, M.
Deposit date:2001-10-16
Release date:2002-08-07
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:The structure of a mutant photosynthetic reaction center shows unexpected changes in main chain orientations and quinone position.
Biochemistry, 41, 2002
1K6N
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BU of 1k6n by Molmil
E(L212)A,D(L213)A Double Mutant Structure of Photosynthetic Reaction Center from Rhodobacter Sphaeroides
Descriptor: BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, CARDIOLIPIN, ...
Authors:Pokkuluri, P.R, Laible, P.D, Deng, Y.-L, Wong, T.N, Hanson, D.K, Schiffer, M.
Deposit date:2001-10-16
Release date:2002-08-07
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:The structure of a mutant photosynthetic reaction center shows unexpected changes in main chain orientations and quinone position.
Biochemistry, 41, 2002
3PIC
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BU of 3pic by Molmil
Glucuronoyl Esterase catalytic domain (Cip2_GE) from Hypocrea jecorina
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Cip2
Authors:Pokkuluri, P.R.
Deposit date:2010-11-05
Release date:2011-06-01
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of the catalytic domain of glucuronoyl esterase Cip2 from Hypocrea jecorina.
Proteins, 79, 2011
3SEL
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BU of 3sel by Molmil
PpcA M58N mutant
Descriptor: (3ALPHA,5BETA,12ALPHA)-3,12-DIHYDROXYCHOLAN-24-OIC ACID, CYTOCHROME C7, HEME C, ...
Authors:Pokkuluri, P.R, Schiffer, M.
Deposit date:2011-06-10
Release date:2012-06-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Pitfalls in the interpretation of structural changes in mutant proteins from crystal structures.
J.Struct.Funct.Genom., 13, 2012
3SJ1
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BU of 3sj1 by Molmil
PpcA M58D mutant
Descriptor: (3ALPHA,5BETA,12ALPHA)-3,12-DIHYDROXYCHOLAN-24-OIC ACID, CYTOCHROME C7, HEME C, ...
Authors:Pokkuluri, P.R, Schiffer, M.
Deposit date:2011-06-20
Release date:2012-07-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Pitfalls in the interpretation of structural changes in mutant proteins from crystal structures.
J.Struct.Funct.Genom., 13, 2012
3SJ0
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BU of 3sj0 by Molmil
PpcA mutant M58S
Descriptor: (3ALPHA,5BETA,12ALPHA)-3,12-DIHYDROXYCHOLAN-24-OIC ACID, CYTOCHROME C7, HEME C, ...
Authors:Pokkuluri, P.R, Schiffer, M.
Deposit date:2011-06-20
Release date:2012-07-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Pitfalls in the interpretation of structural changes in mutant proteins from crystal structures.
J.Struct.Funct.Genom., 13, 2012
3SJ4
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BU of 3sj4 by Molmil
PpcA mutant M58K
Descriptor: (3ALPHA,5BETA,12ALPHA)-3,12-DIHYDROXYCHOLAN-24-OIC ACID, CYTOCHROME C7, HEME C, ...
Authors:Pokkuluri, P.R, Schiffer, M.
Deposit date:2011-06-20
Release date:2012-07-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Pitfalls in the interpretation of structural changes in mutant proteins from crystal structures.
J.Struct.Funct.Genom., 13, 2012
4K08
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BU of 4k08 by Molmil
Periplasmic sensor domain of chemotaxis protein, Adeh_3718
Descriptor: ACETATE ION, Methyl-accepting chemotaxis sensory transducer, ZINC ION
Authors:Pokkuluri, P.R, Mack, J.C, Bearden, J, Rakowski, E, Schiffer, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-04-03
Release date:2013-07-17
Last modified:2015-04-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Analysis of periplasmic sensor domains from Anaeromyxobacter dehalogenans 2CP-C: structure of one sensor domain from a histidine kinase and another from a chemotaxis protein.
Microbiologyopen, 2, 2013
4K0D
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BU of 4k0d by Molmil
Periplasmic sensor domain of sensor histidine kinase, Adeh_2942
Descriptor: ACETATE ION, CHLORIDE ION, Periplasmic sensor hybrid histidine kinase, ...
Authors:Pokkuluri, P.R, Mack, J.C, Bearden, J, Rakowski, E, Schiffer, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-04-03
Release date:2013-06-12
Last modified:2015-04-15
Method:X-RAY DIFFRACTION (1.997 Å)
Cite:Analysis of periplasmic sensor domains from Anaeromyxobacter dehalogenans 2CP-C: structure of one sensor domain from a histidine kinase and another from a chemotaxis protein.
Microbiologyopen, 2, 2013

 

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