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PDB: 54 results

3CU4
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BU of 3cu4 by Molmil
OmcF, Outer membrance cytochrome F from Geobacter sulfurreducens
Descriptor: Cytochrome c family protein, PROTOPORPHYRIN IX CONTAINING FE
Authors:Pokkuluri, P.R, Schiffer, M.
Deposit date:2008-04-15
Release date:2008-10-21
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Outer membrane cytochrome c, OmcF, from Geobacter sulfurreducens: High structural similarity to an algal cytochrome c(6).
Proteins, 74, 2008
1RWJ
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c7-type three-heme cytochrome domain
Descriptor: Cytochrome c family protein, HEME C
Authors:Pokkuluri, P.R, Londer, Y.Y, Duke, N.E.C, Erickson, J, Pessanha, M, Salgueiro, C.A, Schiffer, M.
Deposit date:2003-12-16
Release date:2004-08-03
Last modified:2021-03-03
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of a novel c7-type three-heme cytochrome domain from a multidomain cytochrome c polymer.
Protein Sci., 13, 2004
6U97
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Structure of OmcF_H47I mutant
Descriptor: Lipoprotein cytochrome c, 1 heme-binding site, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Pokkuluri, P.R.
Deposit date:2019-09-06
Release date:2020-02-19
Method:X-RAY DIFFRACTION (1.13 Å)
Cite:Modulation of the Redox Potential and Electron/Proton Transfer Mechanisms in the Outer Membrane Cytochrome OmcF FromGeobacter sulfurreducens.
Front Microbiol, 10, 2019
2CD0
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BU of 2cd0 by Molmil
STRUCTURE OF HUMAN LAMBDA-6 LIGHT CHAIN DIMER WIL
Descriptor: PROTEIN (BENCE-JONES PROTEIN WIL, A VARIABLE DOMAIN FROM LAMBDA-6 TYPE IMMUNOGLOBULIN LIGHT CHAIN)
Authors:Pokkuluri, P.R, Solomon, A, Weiss, D.T, Stevens, F.J, Schiffer, M.
Deposit date:1999-03-08
Release date:2000-03-08
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Tertiary structure of human lambda 6 light chains.
Amyloid, 6, 1999
4RLR
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BU of 4rlr by Molmil
Structure of monoheme cytochrome PccH from Geobacter sulfurreducens
Descriptor: ACETATE ION, CACODYLATE ION, Cytochrome c, ...
Authors:Pokkuluri, P.R, Salgueiro, C.A.
Deposit date:2014-10-17
Release date:2015-04-01
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:The structure of PccH from Geobacter sulfurreducens - a novel low reduction potential monoheme cytochrome essential for accepting electrons from an electrode.
Febs J., 282, 2015
1CD0
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STRUCTURE OF HUMAN LAMDA-6 LIGHT CHAIN DIMER JTO
Descriptor: PROTEIN (JTO, A VARIABLE DOMAIN FROM LAMBDA-6 TYPE IMMUNOGLOBULIN LIGHT CHAIN)
Authors:Pokkuluri, P.R, Solomon, A, Weiss, D.T, Stevens, F.J, Schiffer, M.
Deposit date:1999-03-05
Release date:2000-03-06
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Tertiary structure of human lambda 6 light chains.
Amyloid, 6, 1999
1MRF
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BU of 1mrf by Molmil
PREPARATION, CHARACTERIZATION AND CRYSTALLIZATION OF AN ANTIBODY FAB FRAGMENT THAT RECOGNIZES RNA. CRYSTAL STRUCTURES OF NATIVE FAB AND THREE FAB-MONONUCLEOTIDE COMPLEXES
Descriptor: 2'-DEOXYINOSINE-5'-MONOPHOSPHATE, IGG2B-KAPPA JEL103 FAB (HEAVY CHAIN), IGG2B-KAPPA JEL103 FAB (LIGHT CHAIN), ...
Authors:Pokkuluri, P.R, Cygler, M.
Deposit date:1994-06-13
Release date:1995-02-14
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Preparation, characterization and crystallization of an antibody Fab fragment that recognizes RNA. Crystal structures of native Fab and three Fab-mononucleotide complexes.
J.Mol.Biol., 243, 1994
1MRE
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PREPARATION, CHARACTERIZATION AND CRYSTALLIZATION OF AN ANTIBODY FAB FRAGMENT THAT RECOGNIZES RNA. CRYSTAL STRUCTURES OF NATIVE FAB AND THREE FAB-MONONUCLEOTIDE COMPLEXES
Descriptor: GUANOSINE-5'-DIPHOSPHATE, IGG2B-KAPPA JEL103 FAB (HEAVY CHAIN), IGG2B-KAPPA JEL103 FAB (LIGHT CHAIN), ...
Authors:Pokkuluri, P.R, Cygler, M.
Deposit date:1994-06-13
Release date:1995-02-14
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Preparation, characterization and crystallization of an antibody Fab fragment that recognizes RNA. Crystal structures of native Fab and three Fab-mononucleotide complexes.
J.Mol.Biol., 243, 1994
6NFN
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Fab fragment of anti-cocaine antibody h2E2 bound to benzoylecgonine
Descriptor: 3-(BENZOYLOXY)-8-METHYL-8-AZABICYCLO[3.2.1]OCTANE-2-CARBOXYLIC ACID, ACETATE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Pokkuluri, P.R, Tan, K.
Deposit date:2018-12-20
Release date:2019-11-20
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.63 Å)
Cite:Structural analysis of free and liganded forms of the Fab fragment of a high-affinity anti-cocaine antibody, h2E2.
Acta Crystallogr.,Sect.F, 75, 2019
6NEX
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BU of 6nex by Molmil
Fab fragment of anti-cocaine antibody h2E2
Descriptor: ACETATE ION, Anitgen binding fragment light chain, Antigen binding fragment heavy chain, ...
Authors:Pokkuluri, P.R, Tan, K.
Deposit date:2018-12-18
Release date:2019-11-20
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural analysis of free and liganded forms of the Fab fragment of a high-affinity anti-cocaine antibody, h2E2.
Acta Crystallogr.,Sect.F, 75, 2019
3OV0
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Structure of dodecaheme cytochrome c GSU1996
Descriptor: Cytochrome c family protein, HEME C
Authors:Pokkuluri, P.R, Schiffer, M.
Deposit date:2010-09-15
Release date:2010-12-29
Last modified:2021-03-03
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structure of a novel dodecaheme cytochrome c from Geobacter sulfurreducens reveals an extended 12nm protein with interacting hemes.
J.Struct.Biol., 174, 2011
3OUE
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Structure of C-terminal hexaheme fragment of GSU1996
Descriptor: Cytochrome c family protein, HEME C, SULFATE ION
Authors:Pokkuluri, P.R, Schiffer, M.
Deposit date:2010-09-14
Release date:2010-12-29
Last modified:2021-03-03
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structure of a novel dodecaheme cytochrome c from Geobacter sulfurreducens reveals an extended 12nm protein with interacting hemes.
J.Struct.Biol., 174, 2011
1K6L
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BU of 1k6l by Molmil
Photosynethetic Reaction Center from Rhodobacter sphaeroides
Descriptor: BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, CARDIOLIPIN, ...
Authors:Pokkuluri, P.R, Laible, P.D, Deng, Y.-L, Wong, T.N, Hanson, D.K, Schiffer, M.
Deposit date:2001-10-16
Release date:2002-08-07
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:The structure of a mutant photosynthetic reaction center shows unexpected changes in main chain orientations and quinone position.
Biochemistry, 41, 2002
1K6N
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E(L212)A,D(L213)A Double Mutant Structure of Photosynthetic Reaction Center from Rhodobacter Sphaeroides
Descriptor: BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, CARDIOLIPIN, ...
Authors:Pokkuluri, P.R, Laible, P.D, Deng, Y.-L, Wong, T.N, Hanson, D.K, Schiffer, M.
Deposit date:2001-10-16
Release date:2002-08-07
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:The structure of a mutant photosynthetic reaction center shows unexpected changes in main chain orientations and quinone position.
Biochemistry, 41, 2002
3OUQ
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Structure of N-terminal hexaheme fragment of GSU1996
Descriptor: Cytochrome c family protein, HEME C
Authors:Pokkuluri, P.R, Schiffer, M.
Deposit date:2010-09-15
Release date:2010-12-29
Last modified:2021-03-03
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of a novel dodecaheme cytochrome c from Geobacter sulfurreducens reveals an extended 12nm protein with interacting hemes.
J.Struct.Biol., 174, 2011
1EK3
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BU of 1ek3 by Molmil
KAPPA-4 IMMUNOGLOBULIN VL, REC
Descriptor: CALCIUM ION, CHLORIDE ION, KAPPA-4 IMMUNOGLOBULIN LIGHT CHAIN VL
Authors:Pokkuluri, P.R, Huang, D.-B, Raffen, R, Stevens, F.J, Schiffer, M.
Deposit date:2000-03-06
Release date:2001-03-06
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Structure of Amyloidogenic Kappa-4 Immunoglobulin VL, REC
To be Published
1EEU
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BU of 1eeu by Molmil
M4L/Y(27D)D/Q89D/T94H mutant of LEN
Descriptor: ISOPROPYL ALCOHOL, KAPPA-4 IMMUNOGLOBULIN (LIGHT CHAIN)
Authors:Pokkuluri, P.R, Cai, X, Gu, M, Stevens, F.J, Schiffer, M.
Deposit date:2000-02-03
Release date:2001-02-03
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Factors contributing to decreased protein stability when aspartic acid residues are in beta-sheet regions.
Protein Sci., 11, 2002
1EFQ
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BU of 1efq by Molmil
Q38D mutant of LEN
Descriptor: KAPPA-4 IMMUNOGLOBULIN (LIGHT CHAIN), URANYL (VI) ION, ZINC ION
Authors:Pokkuluri, P.R, Cai, X, Gu, M, Stevens, F.J, Schiffer, M.
Deposit date:2000-02-09
Release date:2001-02-09
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Factors contributing to decreased protein stability when aspartic acid residues are in beta-sheet regions.
Protein Sci., 11, 2002
1EEQ
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BU of 1eeq by Molmil
M4L/Y(27D)D/T94H Mutant of LEN
Descriptor: KAPPA-4 IMMUNOGLOBULIN (LIGHT CHAIN)
Authors:Pokkuluri, P.R, Raffen, R, Dieckman, L, Boogaard, C, Stevens, F.J, Schiffer, M.
Deposit date:2000-02-01
Release date:2001-02-01
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Increasing protein stability by polar surface residues: domain-wide consequences of interactions within a loop.
Biophys.J., 82, 2002
3PIC
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BU of 3pic by Molmil
Glucuronoyl Esterase catalytic domain (Cip2_GE) from Hypocrea jecorina
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Cip2
Authors:Pokkuluri, P.R.
Deposit date:2010-11-05
Release date:2011-06-01
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of the catalytic domain of glucuronoyl esterase Cip2 from Hypocrea jecorina.
Proteins, 79, 2011
3B47
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Periplasmic sensor domain of chemotaxis protein GSU0582
Descriptor: Methyl-accepting chemotaxis protein, PROTOPORPHYRIN IX CONTAINING FE
Authors:Pokkuluri, P.R, Schiffer, M.
Deposit date:2007-10-23
Release date:2008-04-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures and solution properties of two novel periplasmic sensor domains with c-type heme from chemotaxis proteins of Geobacter sulfurreducens: implications for signal transduction.
J.Mol.Biol., 377, 2008
3B42
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Periplasmic sensor domain of chemotaxis protein GSU0935
Descriptor: Methyl-accepting chemotaxis protein, putative, PROTOPORPHYRIN IX CONTAINING FE
Authors:Pokkuluri, P.R, Schiffer, M.
Deposit date:2007-10-23
Release date:2008-04-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures and solution properties of two novel periplasmic sensor domains with c-type heme from chemotaxis proteins of Geobacter sulfurreducens: implications for signal transduction.
J.Mol.Biol., 377, 2008
3BXU
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BU of 3bxu by Molmil
PpcB, A Cytochrome c7 from Geobacter sulfurreducens
Descriptor: Cytochrome c3, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Pokkuluri, P.R, Schiffer, M.
Deposit date:2008-01-14
Release date:2008-07-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structural insights into the modulation of the redox properties of two Geobacter sulfurreducens homologous triheme cytochromes.
Biochim.Biophys.Acta, 1777, 2008
1QAC
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BU of 1qac by Molmil
CHANGE IN DIMERIZATION MODE BY REMOVAL OF A SINGLE UNSATISFIED POLAR RESIDUE
Descriptor: IMMUNOGLOBULIN LIGHT CHAIN VARIABLE DOMAIN
Authors:Pokkuluri, P.R, Cai, X, Johnson, G, Stevens, F.J, Schiffer, M.
Deposit date:1999-02-25
Release date:2000-02-23
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Change in dimerization mode by removal of a single unsatisfied polar residue located at the interface.
Protein Sci., 9, 2000
1MRC
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BU of 1mrc by Molmil
PREPARATION, CHARACTERIZATION AND CRYSTALLIZATION OF AN ANTIBODY FAB FRAGMENT THAT RECOGNIZES RNA. CRYSTAL STRUCTURES OF NATIVE FAB AND THREE FAB-MONONUCLEOTIDE COMPLEXES
Descriptor: IGG2B-KAPPA JEL103 FAB (HEAVY CHAIN), IGG2B-KAPPA JEL103 FAB (LIGHT CHAIN), IMIDAZOLE, ...
Authors:Pokkuluri, P.R, Cygler, M.
Deposit date:1994-06-13
Release date:1995-02-14
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Preparation, characterization and crystallization of an antibody Fab fragment that recognizes RNA. Crystal structures of native Fab and three Fab-mononucleotide complexes.
J.Mol.Biol., 243, 1994

 

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