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PDB: 123 件
7BC3
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BU of 7bc3 by Molmil
Native virion of Kashmir bee virus at acidic pH
分子名称: Structural polyprotein
著者Mukhamedova, L, Plevka, P, Fuzik, T, Hrebik, D, Novacek, J.
登録日2020-12-18
公開日2021-03-03
最終更新日2022-11-30
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Virion structure and in vitro genome release mechanism of dicistrovirus Kashmir bee virus.
J.Virol., 95, 2021
7BGK
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BU of 7bgk by Molmil
Native virion of Kashmir bee virus at neutral pH
分子名称: Structural polyprotein
著者Mukhamedova, L, Plevka, P, Fuzik, T, Hrebik, D, Novacek, J.
登録日2021-01-07
公開日2021-03-10
最終更新日2022-11-30
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Virion structure and in vitro genome release mechanism of dicistrovirus Kashmir bee virus.
J.Virol., 95, 2021
7BE9
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BU of 7be9 by Molmil
Kashmir bee virus empty particle at acidic pH
分子名称: Structural polyprotein
著者Mukhamedova, L, Plevka, P, Fuzik, T, Hrebik, D.
登録日2021-01-06
公開日2021-03-10
最終更新日2022-11-30
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Virion structure and in vitro genome release mechanism of dicistrovirus Kashmir bee virus.
J.Virol., 95, 2021
7BG8
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BU of 7bg8 by Molmil
KBV activated particle at acidic pH
分子名称: Structural polyprotein
著者Mukhamedova, L, Plevka, P, Fuzik, T, Hrebik, D.
登録日2021-01-06
公開日2021-03-10
最終更新日2022-11-30
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Virion structure and in vitro genome release mechanism of dicistrovirus Kashmir bee virus.
J.Virol., 95, 2021
4BTQ
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BU of 4btq by Molmil
Coordinates of the bacteriophage phi6 capsid subunits fitted into the cryoEM map EMD-1206
分子名称: MAJOR INNER PROTEIN P1
著者Nemecek, D, Boura, E, Wu, W, Cheng, N, Plevka, P, Qiao, J, Mindich, L, Heymann, J.B, Hurley, J.H, Steven, A.C.
登録日2013-06-18
公開日2013-12-11
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (7.5 Å)
主引用文献Subunit Folds and Maturation Pathway of a Dsrna Virus Capsid.
Structure, 21, 2013
4BTG
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BU of 4btg by Molmil
Coordinates of the bacteriophage phi6 capsid subunits (P1A and P1B) fitted into the cryoEM reconstruction of the procapsid at 4.4 A resolution
分子名称: MAJOR INNER PROTEIN P1
著者Nemecek, D, Boura, E, Wu, W, Cheng, N, Plevka, P, Qiao, J, Mindich, L, Heymann, J.B, Hurley, J.H, Steven, A.C.
登録日2013-06-17
公開日2013-08-14
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Subunit Folds and Maturation Pathway of a Dsrna Virus Capsid.
Structure, 21, 2013
5O6A
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BU of 5o6a by Molmil
The cryo-EM structure of Tick-borne encephalitis virus mature particle
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope protein, Small envelope protein M
著者Fuzik, T, Plevka, P.
登録日2017-06-06
公開日2018-02-07
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structure of tick-borne encephalitis virus and its neutralization by a monoclonal antibody.
Nat Commun, 9, 2018
5O6V
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BU of 5o6v by Molmil
The cryo-EM structure of Tick-borne encephalitis virus complexed with Fab fragment of neutralizing antibody 19/1786
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope protein, Fab 19/1786 - Heavy chain, ...
著者Fuzik, T, Plevka, P.
登録日2017-06-07
公開日2018-02-07
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structure of tick-borne encephalitis virus and its neutralization by a monoclonal antibody.
Nat Commun, 9, 2018
6TO8
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BU of 6to8 by Molmil
Neck of empty GTA particle computed with C12 symmetry
分子名称: Adaptor protein Rcc01688, Portal protein Rcc01684
著者Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P.
登録日2019-12-11
公開日2020-07-22
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.36 Å)
主引用文献Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
6TEA
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BU of 6tea by Molmil
Tail of native GTA particle computed with helical refinement, C6 symmetry
分子名称: Phage major tail protein, TP901-1 family
著者Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P.
登録日2019-11-11
公開日2020-07-22
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.89 Å)
主引用文献Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
6TB9
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BU of 6tb9 by Molmil
Capsid of native GTA particle computed with C5 symmetry
分子名称: Head spike base Rcc01079, Head spike fiber Rcc01080, Major capsid protein Rcc01687
著者Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P.
登録日2019-11-01
公開日2020-07-22
最終更新日2022-02-16
実験手法ELECTRON MICROSCOPY (3.56 Å)
主引用文献Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
6TSU
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BU of 6tsu by Molmil
Capsid of empty GTA particle computed with C5 symmetry
分子名称: Major capsid protein Rcc01687, Uncharacterized protein
著者Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P.
登録日2019-12-21
公開日2020-07-22
最終更新日2022-02-16
実験手法ELECTRON MICROSCOPY (3.42 Å)
主引用文献Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
6TOA
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BU of 6toa by Molmil
Neck of empty GTA particle computed with C6 symmetry
分子名称: Adaptor protein Rcc01688, Portal protein Rcc01684, Stopper protein Rcc01689, ...
著者Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P.
登録日2019-12-11
公開日2020-07-22
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.47 Å)
主引用文献Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
6TE9
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BU of 6te9 by Molmil
Neck of native GTA particle computed with C6 symmetry
分子名称: Adaptor protein Rcc01688, Phage major tail protein, TP901-1 family, ...
著者Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P.
登録日2019-11-11
公開日2020-07-22
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.58 Å)
主引用文献Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
6TSV
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BU of 6tsv by Molmil
Tail of empty GTA particle computed with helical refinement, C6 symmetry
分子名称: Tail tube protein Rcc01691
著者Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P.
登録日2019-12-21
公開日2020-07-22
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.78 Å)
主引用文献Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
6TSW
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BU of 6tsw by Molmil
Isometric capsid of empty GTA particle computed with I4(I,n25r) symmetry
分子名称: Major capsid protein Rcc01687
著者Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P.
登録日2019-12-21
公開日2020-07-22
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (4.03 Å)
主引用文献Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
6TE8
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BU of 6te8 by Molmil
Neck of native GTA particle computed with C12 symmetry
分子名称: Adaptor protein Rcc01688, Phage portal protein, HK97 family
著者Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P.
登録日2019-11-11
公開日2020-07-22
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.32 Å)
主引用文献Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
6TEB
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BU of 6teb by Molmil
Tail-baseplate interface of native GTA particle computed with C6 symmetry
分子名称: Distal tail protein Rcc01695, Tail tube protein Rcc01691
著者Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P.
登録日2019-11-11
公開日2020-07-22
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (4.14 Å)
主引用文献Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
6TBA
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BU of 6tba by Molmil
Virion of native gene transfer agent (GTA) particle
分子名称: IRON/SULFUR CLUSTER, Phage major capsid protein, HK97 family, ...
著者Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P.
登録日2019-11-01
公開日2020-07-22
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (4.54 Å)
主引用文献Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
6TEH
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BU of 6teh by Molmil
Baseplate of native GTA particle computed with C3 symmetry
分子名称: IRON/SULFUR CLUSTER, Putative gene transfer agent protein
著者Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P.
登録日2019-11-12
公開日2020-07-22
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.99 Å)
主引用文献Structure and mechanism of DNA delivery of a gene transfer agent.
Nat Commun, 11, 2020
6TUI
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BU of 6tui by Molmil
Virion of empty GTA particle
分子名称: Adaptor protein Rcc01688, Phage major capsid protein, HK97 family, ...
著者Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P.
登録日2020-01-07
公開日2020-10-14
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (10.47 Å)
主引用文献Virion of empty GTA particle
Nat Commun, 11, 2020
5L8Q
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BU of 5l8q by Molmil
Structure of deformed wing virus, a honeybee pathogen
分子名称: URIDINE-5'-MONOPHOSPHATE, VP1, VP2, ...
著者Skubnik, K, Novacek, J, Fuzik, T, Pridal, A, Paxton, R, Plevka, P.
登録日2016-06-08
公開日2017-03-29
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structure of deformed wing virus, a major honey bee pathogen.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5L7Q
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BU of 5l7q by Molmil
Structure of deformed wing virus, a honeybee pathogen
分子名称: VP1, vp2, vp3
著者Skubnik, K, Novacek, J, Fuzik, T, Pridal, A, Paxton, R, Plevka, P.
登録日2016-06-03
公開日2017-03-29
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structure of deformed wing virus, a major honey bee pathogen.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5LK8
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BU of 5lk8 by Molmil
single particle reconstruction of slow bee paralysis virus empty particle
分子名称: VP1, VP2, VP3
著者Kalynych, S, Fuzik, T, Plevka, P.
登録日2016-07-21
公開日2017-01-18
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.42 Å)
主引用文献Cryo-EM study of slow bee paralysis virus at low pH reveals iflavirus genome release mechanism.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5LVC
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BU of 5lvc by Molmil
Aichi virus 1: empty particle
分子名称: VP0, VP1, VP3
著者Sabin, C, Fuzik, T, Skubnik, K, Palkova, L, Lindberg, A.M, Plevka, P.
登録日2016-09-13
公開日2016-12-14
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Structure of Aichi Virus 1 and Its Empty Particle: Clues to Kobuvirus Genome Release Mechanism.
J.Virol., 90, 2016

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