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PDB: 50 results

1FP4
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CRYSTAL STRUCTURE OF THE ALPHA-H195Q MUTANT OF NITROGENASE
Descriptor: 3-HYDROXY-3-CARBOXY-ADIPIC ACID, CALCIUM ION, FE-MO-S CLUSTER, ...
Authors:Sorlie, M, Christiansen, J, Lemon, B.J, Peters, J.W, Dean, D.R, Hales, B.J.
Deposit date:2000-08-30
Release date:2002-11-20
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Mechanistic features and structure of the nitrogenase alpha-Gln195 MoFe protein
Biochemistry, 40, 2001
1FP6
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THE NITROGENASE FE PROTEIN FROM AZOTOBACTER VINELANDII COMPLEXED WITH MGADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, IRON/SULFUR CLUSTER, MAGNESIUM ION, ...
Authors:Jang, S.B, Seefeldt, L.C, Peters, J.W.
Deposit date:2000-08-30
Release date:2001-01-17
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Insights into nucleotide signal transduction in nitrogenase: structure of an iron protein with MgADP bound.
Biochemistry, 39, 2000
1G20
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MGATP-BOUND AND NUCLEOTIDE-FREE STRUCTURES OF A NITROGENASE PROTEIN COMPLEX BETWEEN LEU127DEL-FE PROTEIN AND THE MOFE PROTEIN
Descriptor: 3-HYDROXY-3-CARBOXY-ADIPIC ACID, CALCIUM ION, FE(8)-S(7) CLUSTER, ...
Authors:Chiu, H.-J, Peters, J.W, Lanzilotta, W.N, Ryle, M.J, Seefeldt, L.C, Howard, J.B, Rees, D.C.
Deposit date:2000-10-16
Release date:2001-01-31
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:MgATP-Bound and nucleotide-free structures of a nitrogenase protein complex between the Leu 127 Delta-Fe-protein and the MoFe-protein.
Biochemistry, 40, 2001
1G21
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MGATP-BOUND AND NUCLEOTIDE-FREE STRUCTURES OF A NITROGENASE PROTEIN COMPLEX BETWEEN LEU127DEL-FE PROTEIN AND THE MOFE PROTEIN
Descriptor: 3-HYDROXY-3-CARBOXY-ADIPIC ACID, ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, ...
Authors:Chiu, H.-J, Peters, J.W, Lanzilotta, W.N, Ryle, M.J, Seefeldt, L.C, Howard, J.B, Rees, D.C.
Deposit date:2000-10-16
Release date:2001-01-31
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (3 Å)
Cite:MgATP-Bound and nucleotide-free structures of a nitrogenase protein complex between the Leu 127 Delta-Fe-protein and the MoFe-protein.
Biochemistry, 40, 2001
7MGN
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BU of 7mgn by Molmil
Crystal structure of F501H/H506E variant of 2-ketopropyl coenzyme M oxidoreductase/carboxylase (2-KPCC) from Xanthobacter autotrophicus
Descriptor: 1-THIOETHANESULFONIC ACID, 2-oxopropyl-CoM reductase, carboxylating, ...
Authors:Zadvornyy, O.A, Prussia, G, Peters, J.W.
Deposit date:2021-04-12
Release date:2021-07-21
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The unique Phe-His dyad of 2-ketopropyl coenzyme M oxidoreductase/carboxylase selectively promotes carboxylation and S-C bond cleavage.
J.Biol.Chem., 297, 2021
7MGO
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Crystal structure of F501H variant of 2-ketopropyl coenzyme M oxidoreductase/carboxylase (2-KPCC) from Xanthobacter autotrophicus
Descriptor: 1-THIOETHANESULFONIC ACID, 2-oxopropyl-CoM reductase, carboxylating, ...
Authors:Prussia, G, Zadvornyy, O.A, Peters, J.W.
Deposit date:2021-04-13
Release date:2021-07-21
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The unique Phe-His dyad of 2-ketopropyl coenzyme M oxidoreductase/carboxylase selectively promotes carboxylation and S-C bond cleavage.
J.Biol.Chem., 297, 2021
3FWY
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Crystal structure of the L protein of Rhodobacter sphaeroides light-independent protochlorophyllide reductase (BchL) with MgADP bound: a homologue of the nitrogenase Fe protein
Descriptor: ADENOSINE-5'-DIPHOSPHATE, IRON/SULFUR CLUSTER, Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein, ...
Authors:Sarma, R, Barney, B.M, Hamilton, T.L, Jones, A, Seefeldt, L.C, Peters, J.W.
Deposit date:2009-01-19
Release date:2009-03-24
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Crystal Structure of the L Protein of Rhodobacter sphaeroides Light-Independent Protochlorophyllide Reductase with MgADP Bound: A Homologue of the Nitrogenase Fe Protein.
Biochemistry, 47, 2008
1RW4
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Nitrogenase Fe protein l127 deletion variant
Descriptor: GLYCEROL, IRON/SULFUR CLUSTER, Nitrogenase iron protein 1
Authors:Sen, S, Igarashi, R, Smith, A, Johnson, M.K, Seefeldt, L.C, Peters, J.W.
Deposit date:2003-12-15
Release date:2004-03-09
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A Conformational Mimic of the MgATP-Bound "On State" of the Nitrogenase Iron Protein.
Biochemistry, 43, 2004
3PND
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BU of 3pnd by Molmil
FAD binding by ApbE protein from Salmonella enterica: a new class of FAD binding proteins
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION, Thiamine biosynthesis lipoprotein ApbE
Authors:Boyd, J.M, Endrizzi, J.A, Hamilton, T.L, Christopherson, M.R, Mulder, D.W, Downs, D.M, Peters, J.W.
Deposit date:2010-11-18
Release date:2011-01-05
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:FAD binding by ApbE protein from Salmonella enterica: a new class of FAD-binding proteins.
J.Bacteriol., 193, 2011
1WKM
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BU of 1wkm by Molmil
THE PRODUCT BOUND FORM OF THE MN(II)LOADED METHIONINE AMINOPEPTIDASE FROM HYPERTHERMOPHILE PYROCOCCUS FURIOSUS
Descriptor: MANGANESE (II) ION, METHIONINE, Methionine aminopeptidase
Authors:Copik, A.J, Nocek, B.P, Jang, S.B, Swierczek, S.I, Ruebush, S, Meng, L, D'souza, V.M, Peters, J.W, Bennett, B, Holz, R.C.
Deposit date:2004-06-01
Release date:2005-02-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:EPR and X-ray crystallographic characterization of the product-bound form of the MnII-loaded methionyl aminopeptidase from Pyrococcus furiosus
Biochemistry, 44, 2005
1XD8
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BU of 1xd8 by Molmil
Crystal Structure of the Nitrogenase Fe protein Asp39Asn
Descriptor: IRON/SULFUR CLUSTER, Nitrogenase iron protein 1
Authors:Jang, S.B, Jeong, M.S, Seefeldt, L.C, Peters, J.W.
Deposit date:2004-09-05
Release date:2005-03-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural and biochemical implications of single amino acid substitutions in the nucleotide-dependent switch regions of the nitrogenase Fe protein from Azotobacter vinelandii
J.Biol.Inorg.Chem., 9, 2004
1XDB
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Crystal Structure of the Nitrogenase Fe protein Asp129Glu
Descriptor: IRON/SULFUR CLUSTER, Nitrogenase iron protein 1
Authors:Jang, S.B, Jeong, M.S, Seefeldt, L.C, Peters, J.W.
Deposit date:2004-09-05
Release date:2005-03-01
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural and biochemical implications of single amino acid substitutions in the nucleotide-dependent switch regions of the nitrogenase Fe protein from Azotobacter vinelandii
J.Biol.Inorg.Chem., 9, 2004
1XD9
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Crystal Structure of the Nitrogenase Fe protein Asp39Asn with MgADP bound
Descriptor: ADENOSINE-5'-DIPHOSPHATE, IRON/SULFUR CLUSTER, MAGNESIUM ION, ...
Authors:Jang, S.B, Jeong, M.S, Seefeldt, L.C, Peters, J.W.
Deposit date:2004-09-05
Release date:2005-03-01
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural and biochemical implications of single amino acid substitutions in the nucleotide-dependent switch regions of the nitrogenase Fe protein from Azotobacter vinelandii
J.Biol.Inorg.Chem., 9, 2004
1C4A
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BU of 1c4a by Molmil
BINDING OF EXOGENOUSLY ADDED CARBON MONOXIDE AT THE ACTIVE SITE OF THE FE-ONLY HYDROGENASE (CPI) FROM CLOSTRIDIUM PASTEURIANUM
Descriptor: 2 IRON/2 SULFUR/5 CARBONYL/2 WATER INORGANIC CLUSTER, FE2/S2 (INORGANIC) CLUSTER, IRON/SULFUR CLUSTER, ...
Authors:Lemon, B.J, Peters, J.W.
Deposit date:1999-08-13
Release date:1999-12-22
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Binding of exogenously added carbon monoxide at the active site of the iron-only hydrogenase (CpI) from Clostridium pasteurianum.
Biochemistry, 38, 1999
1C4C
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BU of 1c4c by Molmil
BINDING OF EXOGENOUSLY ADDED CARBON MONOXIDE AT THE ACTIVE SITE OF THE FE-ONLY HYDROGENASE (CPI) FROM CLOSTRIDIUM PASTEURIANUM
Descriptor: 2 IRON/2 SULFUR/6 CARBONYL/1 WATER INORGANIC CLUSTER, FE2/S2 (INORGANIC) CLUSTER, IRON/SULFUR CLUSTER, ...
Authors:Lemon, B.J, Peters, J.W.
Deposit date:1999-08-16
Release date:1999-12-22
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Binding of exogenously added carbon monoxide at the active site of the iron-only hydrogenase (CpI) from Clostridium pasteurianum.
Biochemistry, 38, 1999
1DE0
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BU of 1de0 by Molmil
MODULATING THE MIDPOINT POTENTIAL OF THE [4FE-4S] CLUSTER OF THE NITROGENASE FE PROTEIN
Descriptor: IRON/SULFUR CLUSTER, NITROGENASE IRON PROTEIN
Authors:Jang, S.B, Seefeldt, L.C, Peters, J.W.
Deposit date:1999-11-12
Release date:2000-02-09
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Modulating the midpoint potential of the [4Fe-4S] cluster of the nitrogenase Fe protein.
Biochemistry, 39, 2000
1MOK
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BU of 1mok by Molmil
NADPH DEPENDENT 2-KETOPROPYL COENZYME M OXIDOREDUCTASE/CARBOXYLASE
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, orf3
Authors:Nocek, B, Jang, S.B, Jeong, M.S, Clark, D.D, Ensign, S.A, Peters, J.W.
Deposit date:2002-09-09
Release date:2002-11-27
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural Basis for CO2 Fixation by a Novel Member of the Disulfide Oxidoreductase Family of Enzymes, 2-Ketopropyl Coenzyme M Oxidoreductase/Carboxylase
Biochemistry, 41, 2002
2C3C
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2.01 Angstrom X-ray crystal structure of a mixed disulfide between coenzyme M and NADPH-dependent oxidoreductase 2-ketopropyl coenzyme M carboxylase
Descriptor: 1-THIOETHANESULFONIC ACID, 2-OXOPROPYL-COM REDUCTASE, ACETONE, ...
Authors:Pandey, A.S, Nocek, B, Clark, D.D, Ensign, S.A, Peters, J.W.
Deposit date:2005-10-05
Release date:2005-12-12
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Mechanistic Implications of the Structure of the Mixed-Disulfide Intermediate of the Disulfide Oxidoreductase, 2-Ketopropyl-Coenzyme M Oxidoreductase/Carboxylase.
Biochemistry, 45, 2006
2C8V
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Insights into the role of nucleotide-dependent conformational change in nitrogenase catalysis: Structural characterization of the nitrogenase Fe protein Leu127 deletion variant with bound MgATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, FE2/S2 (INORGANIC) CLUSTER, MAGNESIUM ION, ...
Authors:Sen, S, Krishnakumar, A, McClead, J, Johnson, M.K, Seefeldt, L.C, Szilagyi, R.K, Peters, J.W.
Deposit date:2005-12-08
Release date:2006-06-01
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Insights Into the Role of Nucleotide-Dependent Conformational Change in Nitrogenase Catalysis: Structural Characterization of the Nitrogenase Fe Protein Leu127 Deletion Variant with Bound Mgatp.
J.Inorg.Biochem., 100, 2006
2CFC
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structural basis for stereo selectivity in the (R)- and (S)- hydroxypropylethane thiosulfonate dehydrogenases
Descriptor: (2-[2-KETOPROPYLTHIO]ETHANESULFONATE, 2-(R)-HYDROXYPROPYL-COM DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Krishnakumar, A.M, Nocek, B.P, Clark, D.D, Ensign, S.A, Peters, J.W.
Deposit date:2006-02-19
Release date:2006-07-26
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Basis for Stereoselectivity in the (R)-and (S)-Hydroxypropylthioethanesulfonate Dehydrogenases.
Biochemistry, 45, 2006
2C3D
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2.15 Angstrom crystal structure of 2-ketopropyl coenzyme M oxidoreductase carboxylase with a coenzyme M disulfide bound at the active site
Descriptor: 1-THIOETHANESULFONIC ACID, 2-OXOPROPYL-COM REDUCTASE, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Pandey, A.S, Nocek, B, Clark, D.D, Ensign, S.A, Peters, J.W.
Deposit date:2005-10-05
Release date:2005-11-07
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Mechanistic Implications of the Structure of the Mixed-Disulfide Intermediate of the Disulfide Oxidoreductase, 2-Ketopropyl-Coenzyme M Oxidoreductase/Carboxylase.
Biochemistry, 45, 2006
5SVC
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Mechanism of ATP-Dependent Acetone Carboxylation, Acetone Carboxylase nucleotide-free structure
Descriptor: Acetone carboxylase alpha subunit, Acetone carboxylase beta subunit, Acetone carboxylase gamma subunit, ...
Authors:Eilers, B.J, Mus, F, Alleman, A.B, Kabasakal, B.V, Murray, J.W, Nocek, B.P, Dubois, J.L, Peters, J.W.
Deposit date:2016-08-05
Release date:2017-08-09
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural Basis for the Mechanism of ATP-Dependent Acetone Carboxylation.
Sci Rep, 7, 2017
5SVB
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Mechanism of ATP-Dependent Acetone Carboxylation, Acetone Carboxylase AMP bound structure
Descriptor: ADENOSINE MONOPHOSPHATE, Acetone carboxylase alpha subunit, Acetone carboxylase beta subunit, ...
Authors:Eilers, B.J, Mus, F, Alleman, A.B, Kabasakal, B.V, Murray, J.W, Nocek, B.P, Dubois, J.L, Peters, J.W.
Deposit date:2016-08-05
Release date:2017-08-09
Last modified:2019-12-04
Method:X-RAY DIFFRACTION (2.645 Å)
Cite:Structural Basis for the Mechanism of ATP-Dependent Acetone Carboxylation.
Sci Rep, 7, 2017
5T2K
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Geobacillus stearothermophilus HemQ with Manganese-Coproporphyrin III
Descriptor: Putative heme-dependent peroxidase GT50_08830, [3,3',3'',3'''-(3,8,13,17-tetramethylporphyrin-2,7,12,18-tetrayl-kappa~4~N~21~,N~22~,N~23~,N~24~)tetra(propanoato)(2-)]manganese
Authors:Gauss, G.H, Celis, A.I, Dubois, J.L, Peters, J.W.
Deposit date:2016-08-23
Release date:2017-01-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure-Based Mechanism for Oxidative Decarboxylation Reactions Mediated by Amino Acids and Heme Propionates in Coproheme Decarboxylase (HemQ).
J. Am. Chem. Soc., 139, 2017
5VJ7
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Ferredoxin NADP Oxidoreductase (Xfn)
Descriptor: FE2/S2 (INORGANIC) CLUSTER, FLAVIN-ADENINE DINUCLEOTIDE, Ferredoxin-NADP(+) reductase subunit alpha, ...
Authors:Zadvornyy, O.A, Nguyen, D.M.N, Schut, G.J, Lipscomb, G.L, Tokmina-Lukaszewska, M, Adams, M.W.W, Peters, J.W.
Deposit date:2017-04-18
Release date:2017-07-19
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Two functionally distinct NADP(+)-dependent ferredoxin oxidoreductases maintain the primary redox balance of Pyrococcus furiosus.
J. Biol. Chem., 292, 2017
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