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PDB: 104 件

6QC0
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PCNA complex with Cdt2 C-terminal PIP-box peptide
分子名称: Denticleless protein homolog, Proliferating cell nuclear antigen
著者Perrakis, A.P, von Castelmur, E.
登録日2018-12-25
公開日2019-01-23
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Direct binding of Cdt2 to PCNA is important for targeting the CRL4Cdt2E3 ligase activity to Cdt1.
Life Sci Alliance, 1, 2018
6QCG
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BU of 6qcg by Molmil
PCNA complex with Cdt1 N-terminal PIP-box peptide
分子名称: DNA replication factor Cdt1, Proliferating cell nuclear antigen
著者Perrakis, A, von Castelmur, E.
登録日2018-12-28
公開日2019-01-23
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Direct binding of Cdt2 to PCNA is important for targeting the CRL4Cdt2E3 ligase activity to Cdt1.
Life Sci Alliance, 1, 2018
1CTN
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BU of 1ctn by Molmil
CRYSTAL STRUCTURE OF A BACTERIAL CHITINASE AT 2.3 ANGSTROMS RESOLUTION
分子名称: CHITINASE A
著者Perrakis, A, Tews, I, Dauter, Z, Wilson, K.S, Vorgias, C.E.
登録日1994-10-10
公開日1995-02-07
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of a bacterial chitinase at 2.3 A resolution.
Structure, 2, 1994
8ARF
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BU of 8arf by Molmil
Crystal structure of the N-terminal parallel dimeric coiled-coil region of the human kinetochore associated protein Spindly
分子名称: Protein Spindly
著者Perrakis, A, Ahmad, M.U.
登録日2022-08-16
公開日2022-09-07
最終更新日2022-09-28
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Conformational transitions of the Spindly adaptor underlie its interaction with Dynein and Dynactin.
J.Cell Biol., 221, 2022
7P0K
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BU of 7p0k by Molmil
Crystal structure of Autotaxin (ENPP2) with 18F-labeled positron emission tomography ligand
分子名称: 2-[[2-ethyl-6-[4-[2-[(3~{R})-3-fluoranylpyrrolidin-1-yl]-2-oxidanylidene-ethyl]piperazin-1-yl]imidazo[1,2-a]pyridin-3-yl]-methyl-amino]-4-(4-fluorophenyl)-2,3-dihydro-1,3-thiazole-5-carbonitrile, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Salgado-Polo, F, Shao, T, Xiao, Z, Van, R, Chen, J, Rong, J, Haider, A, Shao, Y, Josephson, L, Perrakis, A, Liang, S.H.
登録日2021-06-29
公開日2022-07-13
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Imaging Autotaxin In Vivo with 18 F-Labeled Positron Emission Tomography Ligands
J Med Chem, 64, 2021
9GSO
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BU of 9gso by Molmil
DNA binding domain of J-DNA Binding Protein 3 (JBP3)
分子名称: DNA binding domain of J-DNA Binding Protein 3 (JBP3)
著者de Vries, I, Adamopoulos, A, Joosten, R.P, Perrakis, A.
登録日2024-09-16
公開日2024-09-25
実験手法X-RAY DIFFRACTION (1.615 Å)
主引用文献Base-J binding proteins JBP1 and JBP3 have conserved structures of their J-DNA binding domain but drastically different affinities
To Be Published
9GSQ
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BU of 9gsq by Molmil
DNA binding domain of J-DNA Binding Protein 3 (JBP3)
分子名称: CHLORIDE ION, DNA binding domain of J-DNA binding protein 3, GLYCEROL, ...
著者de Vries, I, Adamopoulos, A, Joosten, R.P, Perrakis, A.
登録日2024-09-16
公開日2024-09-25
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Base-J binding proteins JBP1 and JBP3 have conserved structures of their J-DNA binding domain but drastically different affinities
To Be Published
8BBM
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BU of 8bbm by Molmil
DNA binding domain of J-DNA Binding Protein 1 (JBP1)
分子名称: Thymine dioxygenase JBP1
著者de Vries, I, Joosten, R.P, Perrakis, A.
登録日2022-10-13
公開日2022-11-09
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Distant sequence regions of JBP1 contribute to J-DNA binding.
Life Sci Alliance, 6, 2023
6NVQ
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BU of 6nvq by Molmil
Crystal structure of the VASH1-SVBP complex
分子名称: GLYCEROL, Small vasohibin-binding protein, Tubulinyl-Tyr carboxypeptidase 1
著者Adamopoulos, A, Perrakis, A, Heidebrecht, T.
登録日2019-02-05
公開日2019-05-22
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of the tubulin tyrosine carboxypeptidase complex VASH1-SVBP.
Nat.Struct.Mol.Biol., 26, 2019
2CKL
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BU of 2ckl by Molmil
Ring1b-Bmi1 E3 catalytic domain structure
分子名称: IODIDE ION, POLYCOMB GROUP RING FINGER PROTEIN 4, UBIQUITIN LIGASE PROTEIN RING2, ...
著者Buchwald, G, van der Stoop, P, Weichenrieder, O, Perrakis, A, van Lohuizen, M, Sixma, T.K.
登録日2006-04-20
公開日2006-05-11
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure and E3-Ligase Activity of the Ring-Ring Complex of Polycomb Proteins Bmi1 and Ring1B.
Embo J., 25, 2006
3KJY
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BU of 3kjy by Molmil
Crystal structure of reduced HOMO SAPIENS CLIC3
分子名称: Chloride intracellular channel protein 3, SULFATE ION
著者Littler, D.R, Curmi, P.M.G, Breit, S.N, Perrakis, A.
登録日2009-11-04
公開日2009-11-17
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structure of human CLIC3 at 2 A resolution
Proteins, 78, 2010
1VYB
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Endonuclease domain of human LINE1 ORF2p
分子名称: GLYCEROL, ORF2 CONTAINS A REVERSE TRANSCRIPTASE DOMAIN, SULFATE ION, ...
著者Weichenrieder, O, Repanas, K, Perrakis, A.
登録日2004-04-25
公開日2004-06-04
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of the targeting endonuclease of the human LINE-1 retrotransposon.
Structure, 12, 2004
1QBA
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BACTERIAL CHITOBIASE, GLYCOSYL HYDROLASE FAMILY 20
分子名称: CHITOBIASE, SULFATE ION
著者Tews, I, Perrakis, A, Oppenheim, A, Dauter, Z, Wilson, K.S, Vorgias, C.E.
登録日1996-06-06
公開日1997-01-11
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Bacterial chitobiase structure provides insight into catalytic mechanism and the basis of Tay-Sachs disease.
Nat.Struct.Biol., 3, 1996
3FY7
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BU of 3fy7 by Molmil
Crystal structure of homo sapiens CLIC3
分子名称: Chloride intracellular channel protein 3, SULFATE ION
著者Littler, D.R, Curmi, P.M.G, Breit, S.N, Perrakis, A.
登録日2009-01-22
公開日2009-02-24
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structure of human CLIC3 at 2 A resolution
Proteins, 78, 2010
6GVJ
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BU of 6gvj by Molmil
Human Mps1 kinase domain with ordered activation loop
分子名称: CHLORIDE ION, Dual specificity protein kinase TTK, GLYCEROL
著者Roorda, J.C, Hiruma, Y, Joosten, R.P, Perrakis, A.
登録日2018-06-21
公開日2019-01-09
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.41 Å)
主引用文献A crystal structure of the human protein kinase Mps1 reveals an ordered conformation of the activation loop.
Proteins, 87, 2019
6FPV
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BU of 6fpv by Molmil
A llama-derived JBP1-targeting nanobody
分子名称: GLYCEROL, Nanobody
著者van Beusekom, B, Adamopoulos, A, Heidebrecht, T, Joosten, R.P, Perrakis, A.
登録日2018-02-12
公開日2018-10-31
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Characterization and structure determination of a llama-derived nanobody targeting the J-base binding protein 1.
Acta Crystallogr F Struct Biol Commun, 74, 2018
5IJQ
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BU of 5ijq by Molmil
Crystal structure of autotaxin (ENPP2) re-refined
分子名称: 7alpha-hydroxycholesterol, CALCIUM ION, Ectonucleotide pyrophosphatase/phosphodiesterase family member 2, ...
著者Hausmann, J, Joosten, R.P, Perrakis, A.
登録日2016-03-02
公開日2016-06-15
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structural snapshots of the catalytic cycle of the phosphodiesterase Autotaxin.
J.Struct.Biol., 195, 2016
5IJS
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Crystal structure of autotaxin with orthovanadate bound as a trigonal bipyramidal intermediate analog
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 7alpha-hydroxycholesterol, CALCIUM ION, ...
著者Hausmann, J, Joosten, R.P, Perrakis, A.
登録日2016-03-02
公開日2016-06-15
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural snapshots of the catalytic cycle of the phosphodiesterase Autotaxin.
J.Struct.Biol., 195, 2016
3G73
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BU of 3g73 by Molmil
Structure of the FOXM1 DNA binding
分子名称: DNA (5'-D(P*AP*AP*AP*TP*TP*GP*TP*TP*TP*AP*TP*AP*AP*AP*CP*AP*GP*CP*CP*CP*G)-3'), DNA (5'-D(P*TP*TP*CP*GP*GP*GP*CP*TP*GP*TP*TP*TP*AP*TP*AP*AP*AP*CP*AP*AP*T)-3'), Forkhead box protein M1, ...
著者Littler, D.R, Perrakis, A, Hibbert, R.G, Medema, R.H.
登録日2009-02-09
公開日2009-03-03
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Structure of the FoxM1 DNA-recognition domain bound to a promoter sequence
Nucleic Acids Res., 2010
2KLT
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BU of 2klt by Molmil
Second Ca2+ binding domain of NCX1.3
分子名称: Sodium/calcium exchanger 1
著者Hilge, M, Aelen, J, Foarce, A, Perrakis, A, Vuister, G.W.
登録日2009-07-08
公開日2009-08-18
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Ca2+ regulation in the Na+/Ca2+ exchanger features a dual electrostatic switch mechanism.
Proc.Natl.Acad.Sci.USA, 106, 2009
2KLS
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BU of 2kls by Molmil
Apo-form of the second Ca2+ binding domain of NCX1.4
分子名称: Sodium/calcium exchanger 1
著者Hilge, M, Aelen, J, Foarce, A, Perrakis, A, Vuister, G.W.
登録日2009-07-08
公開日2009-08-18
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Ca2+ regulation in the Na+/Ca2+ exchanger features a dual electrostatic switch mechanism.
Proc.Natl.Acad.Sci.USA, 106, 2009
5LJJ
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BU of 5ljj by Molmil
Crystal structure of human Mps1 (TTK) in complex with Reversine
分子名称: 1,2-ETHANEDIOL, Dual specificity protein kinase TTK, N~6~-cyclohexyl-N~2~-(4-morpholin-4-ylphenyl)-9H-purine-2,6-diamine
著者Hiruma, Y, Joosten, R.P, Perrakis, A.
登録日2016-07-18
公開日2016-10-12
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural basis of reversine selectivity in inhibiting Mps1 more potently than aurora B kinase.
Proteins, 84, 2016
5M0E
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BU of 5m0e by Molmil
Structure-based evolution of a hybrid steroid series of Autotaxin inhibitors
分子名称: 7alpha-hydroxycholesterol, CALCIUM ION, Ectonucleotide pyrophosphatase/phosphodiesterase family member 2, ...
著者Keune, W.-J, Heidebrecht, T, Perrakis, A.
登録日2016-10-04
公開日2017-08-16
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Rational Design of Autotaxin Inhibitors by Structural Evolution of Endogenous Modulators.
J. Med. Chem., 60, 2017
5M0D
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Structure-based evolution of a hybrid steroid series of Autotaxin inhibitors
分子名称: CALCIUM ION, Ectonucleotide pyrophosphatase/phosphodiesterase family member 2,Ectonucleotide pyrophosphatase/phosphodiesterase family member 2, GLYCEROL, ...
著者Keune, W.-J, Heidebrecht, T, Perrakis, A.
登録日2016-10-04
公開日2017-08-16
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Rational Design of Autotaxin Inhibitors by Structural Evolution of Endogenous Modulators.
J. Med. Chem., 60, 2017
4BRY
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BU of 4bry by Molmil
The Idas:Geminin heterodimeric parallel coiled-coil
分子名称: GEMININ, MULTICILIN, PHOSPHATE ION, ...
著者Caillat, C, Perrakis, A.
登録日2013-06-06
公開日2013-10-02
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.89 Å)
主引用文献The Geminin and Idas Coiled Coils Preferentially Form a Heterodimer that Inhibits Geminin Function in DNA Replication Licensing
J.Biol.Chem., 288, 2013

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件を2024-10-30に公開中

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