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PDB: 68 件

6PE4
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Yeast Vo motor in complex with 1 VopQ molecule
分子名称: Cation transporter, Uncharacterized protein YPR170W-B, V-type proton ATPase subunit a, ...
著者Peng, W, Li, Y, Tomchick, D.R, Orth, K.
登録日2019-06-20
公開日2020-05-20
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献A distinct inhibitory mechanism of the V-ATPase by Vibrio VopQ revealed by cryo-EM.
Nat.Struct.Mol.Biol., 27, 2020
6PE5
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Yeast Vo motor in complex with 2 VopQ molecules
分子名称: Cation transporter, Uncharacterized protein YPR170W-B, V-type proton ATPase subunit a, ...
著者Peng, W, Li, Y, Tomchick, D.R, Orth, K.
登録日2019-06-20
公開日2020-05-20
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献A distinct inhibitory mechanism of the V-ATPase by Vibrio VopQ revealed by cryo-EM.
Nat.Struct.Mol.Biol., 27, 2020
2QN4
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BU of 2qn4 by Molmil
Structure and function study of rice bifunctional alpha-amylase/subtilisin inhibitor from Oryza sativa
分子名称: Alpha-amylase/subtilisin inhibitor
著者Peng, W.Y, Lin, Y.H, Huang, Y.C, Guan, H.H, Hsieh, Y.C, Chen, C.J.
登録日2007-07-18
公開日2008-07-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure and Function Study of Rice Bifunctional Alpha-Amylase/Subtilisin Inhibitor from Oryza Sativa
To be Published
3QXL
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BU of 3qxl by Molmil
Crystal structure of the CDC25 Domain from Ral-specific Guanine-nucleotide Exchange Factor RalGPS1a
分子名称: Ras-specific guanine nucleotide-releasing factor RalGPS1
著者Peng, W, Xu, J, Guan, X, Sun, Y, Li, X, Zhang, X.C, Rao, Z.
登録日2011-03-02
公開日2011-05-11
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.237 Å)
主引用文献Structural study of the Cdc25 domain from Ral-specific guanine-nucleotide exchange factor RalGPS1a.
Protein Cell, 2, 2011
4CDK
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BU of 4cdk by Molmil
Structure of ZNRF3-RSPO1
分子名称: E3 UBIQUITIN-PROTEIN LIGASE ZNRF3, R-SPONDIN-1
著者Peng, W.C, de Lau, W, Madoori, P.K, Forneris, F, Granneman, J.C.M, Clevers, H, Gros, P.
登録日2013-11-01
公開日2014-01-08
最終更新日2019-04-03
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structures of Wnt-Antagonist Znrf3 and its Complex with R-Spondin 1 and Implications for Signaling.
Plos One, 8, 2013
4CDJ
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BU of 4cdj by Molmil
Structure of ZNRF3 ectodomain
分子名称: 1,2-ETHANEDIOL, E3 UBIQUITIN-PROTEIN LIGASE ZNRF3, FORMIC ACID
著者Peng, W.C, de Lau, W, Madoori, P.K, Forneris, F, Granneman, J.C.M, Clevers, H, Gros, P.
登録日2013-11-01
公開日2014-01-08
最終更新日2019-04-03
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structures of Wnt-Antagonist Znrf3 and its Complex with R-Spondin 1 and Implications for Signaling.
Plos One, 8, 2013
4BSO
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BU of 4bso by Molmil
Crystal structure of R-spondin 1 (Fu1Fu2) - Native
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, R-SPONDIN-1
著者Peng, W.C, de Lau, W, Forneris, F, Granneman, J.C.M, Huch, M, Clevers, H, Gros, P.
登録日2013-06-11
公開日2013-06-19
最終更新日2013-07-24
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of Stem Cell Growth Factor R-Spondin 1 in Complex with the Ectodomain of its Receptor Lgr5.
Cell Rep., 3, 2013
4BST
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BU of 4bst by Molmil
Structure of the ectodomain of LGR5 in complex with R-spondin-1 (Fu1Fu2) in P6122 crystal form
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, LEUCINE-RICH REPEAT-CONTAINING G-PROTEIN COUPLED RECEPTOR 5, R-SPONDIN-1, ...
著者Peng, W.C, de Lau, W, Forneris, F, Granneman, J.C.M, Huch, M, Clevers, H, Gros, P.
登録日2013-06-11
公開日2013-06-19
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (4.3 Å)
主引用文献Structure of Stem Cell Growth Factor R-Spondin 1 in Complex with the Ectodomain of its Receptor Lgr5.
Cell Rep., 3, 2013
4BSU
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BU of 4bsu by Molmil
Structure of the ectodomain of LGR5 in complex with R-spondin-1 (Fu1Fu2) in C2 crystal form
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, LEUCINE-RICH REPEAT-CONTAINING G-PROTEIN COUPLED RECEPTOR 5, ...
著者Peng, W.C, de Lau, W, Forneris, F, Granneman, J.C.M, Huch, M, Clevers, H, Gros, P.
登録日2013-06-11
公開日2013-06-26
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structure of Stem Cell Growth Factor R-Spondin 1 in Complex with the Ectodomain of its Receptor Lgr5.
Cell Rep., 3, 2013
4BSS
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BU of 4bss by Molmil
Structure of the ectodomain of LGR5 in complex with R-spondin-1 (Fu1Fu2) in P21 crystal form
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, LEUCINE-RICH REPEAT-CONTAINING G-PROTEIN COUPLED RECEPTOR 5, ...
著者Peng, W.C, de Lau, W, Forneris, F, Granneman, J.C.M, Huch, M, Clevers, H, Gros, P.
登録日2013-06-11
公開日2013-06-19
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structure of Stem Cell Growth Factor R-Spondin 1 in Complex with the Ectodomain of its Receptor Lgr5.
Cell Rep., 3, 2013
4BSP
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BU of 4bsp by Molmil
Crystal structure of R-spondin 1 (Fu1Fu2) - Holmium soak
分子名称: HOLMIUM ATOM, R-SPONDIN-1, SULFATE ION
著者Peng, W.C, de Lau, W, Forneris, F, Granneman, J.C.M, Huch, M, Clevers, H, Gros, P.
登録日2013-06-11
公開日2013-06-19
最終更新日2013-07-24
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of Stem Cell Growth Factor R-Spondin 1 in Complex with the Ectodomain of its Receptor Lgr5.
Cell Rep., 3, 2013
4BSR
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BU of 4bsr by Molmil
Structure of the ectodomain of LGR5 in complex with R-spondin-1 (Fu1Fu2) in P22121 crystal form
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, LEUCINE-RICH REPEAT-CONTAINING G-PROTEIN COUPLED RECEPTOR 5, ...
著者Peng, W.C, de Lau, W, Forneris, F, Granneman, J.C.M, Huch, M, Clevers, H, Gros, P.
登録日2013-06-11
公開日2013-06-19
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structure of Stem Cell Growth Factor R-Spondin 1 in Complex with the Ectodomain of its Receptor Lgr5.
Cell Rep., 3, 2013
5GO9
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BU of 5go9 by Molmil
Cryo-EM structure of RyR2 in closed state
分子名称: RyR2, ZINC ION
著者Peng, W, Wu, J.P, Yan, N.
登録日2016-07-26
公開日2016-10-05
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Structural basis for the gating mechanism of the type 2 ryanodine receptor RyR2
Science, 354, 2016
5GOA
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BU of 5goa by Molmil
Cryo-EM structure of RyR2 in open state
分子名称: RyR2, ZINC ION
著者Peng, W, Wu, J.P, Yan, N.
登録日2016-07-26
公開日2016-10-05
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Structural basis for the gating mechanism of the type 2 ryanodine receptor RyR2
Science, 354, 2016
8TWS
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BU of 8tws by Molmil
AvrB bound with UDP-rhamnose and RIN4 C-NOI motif
分子名称: Avirulence protein B, RPM1-interacting protein 4, [[(2~{R},3~{S},4~{R},5~{R})-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{R},4~{R},5~{R},6~{S})-6-methyl-3,4,5-tris(oxidanyl)oxan-2-yl] hydrogen phosphate
著者Peng, W, Orth, K.
登録日2023-08-21
公開日2024-02-28
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Pseudomonas effector AvrB is a glycosyltransferase that rhamnosylates plant guardee protein RIN4.
Sci Adv, 10, 2024
8TXF
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BU of 8txf by Molmil
AvrB bound with RIN4 C-NOI motif
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Avirulence protein B, ...
著者Peng, W, Orth, K.
登録日2023-08-23
公開日2024-02-28
実験手法X-RAY DIFFRACTION (1.29 Å)
主引用文献Pseudomonas effector AvrB is a glycosyltransferase that rhamnosylates plant guardee protein RIN4.
Sci Adv, 10, 2024
8TWJ
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BU of 8twj by Molmil
AvrB_R266A bound with UDP
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Avirulence protein B, ...
著者Peng, W, Orth, K.
登録日2023-08-21
公開日2024-02-28
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Pseudomonas effector AvrB is a glycosyltransferase that rhamnosylates plant guardee protein RIN4.
Sci Adv, 10, 2024
8TWO
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BU of 8two by Molmil
AvrB bound with UDP and RIN4_T166-Rha
分子名称: Avirulence protein B, RPM1-interacting protein 4, URIDINE-5'-DIPHOSPHATE, ...
著者Peng, W, Orth, K.
登録日2023-08-21
公開日2024-02-28
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Pseudomonas effector AvrB is a glycosyltransferase that rhamnosylates plant guardee protein RIN4.
Sci Adv, 10, 2024
4L15
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BU of 4l15 by Molmil
Crystal structure of FIGL-1 AAA domain
分子名称: Fidgetin-like protein 1, TRIS(HYDROXYETHYL)AMINOMETHANE
著者Peng, W, Lin, Z, Li, W, Lu, J, Shen, Y, Wang, C.
登録日2013-06-02
公開日2013-09-04
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural insights into the unusually strong ATPase activity of the AAA domain of the Caenorhabditis elegans fidgetin-like 1 (FIGL-1) protein.
J.Biol.Chem., 288, 2013
4L16
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BU of 4l16 by Molmil
Crystal structure of FIGL-1 AAA domain in complex with ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, Fidgetin-like protein 1
著者Peng, W, Lin, Z, Li, W, Lu, J, Shen, Y, Wang, C.
登録日2013-06-02
公開日2013-09-04
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural insights into the unusually strong ATPase activity of the AAA domain of the Caenorhabditis elegans fidgetin-like 1 (FIGL-1) protein.
J.Biol.Chem., 288, 2013
6MRW
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BU of 6mrw by Molmil
14-meric ClyA pore complex
分子名称: Hemolysin E, chromosomal
著者Peng, W, de Souza Santos, M, Li, Y, Tomchick, D.R, Orth, K.
登録日2018-10-15
公開日2019-05-15
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献High-resolution cryo-EM structures of the E. coli hemolysin ClyA oligomers.
Plos One, 14, 2019
6MRT
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BU of 6mrt by Molmil
12-meric ClyA pore complex
分子名称: Hemolysin E, chromosomal
著者Peng, W, de Souza Santos, M, Li, Y, Tomchick, D.R, Orth, K.
登録日2018-10-15
公開日2019-05-15
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献High-resolution cryo-EM structures of the E. coli hemolysin ClyA oligomers.
Plos One, 14, 2019
6MRU
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BU of 6mru by Molmil
13-meric ClyA pore complex
分子名称: Hemolysin E, chromosomal
著者Peng, W, de Souza Santos, M, Li, Y, Tomchick, D.R, Orth, K.
登録日2018-10-15
公開日2019-05-15
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献High-resolution cryo-EM structures of the E. coli hemolysin ClyA oligomers.
Plos One, 14, 2019
8G5C
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BU of 8g5c by Molmil
Structure of ACLY-D1026A-substrates, local refinement of ASH domain
分子名称: (3S)-citryl-Coenzyme A, ADENOSINE-5'-DIPHOSPHATE, ATP-citrate synthase, ...
著者Xuepeng, W, Ronen, M.
登録日2023-02-12
公開日2023-05-10
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (2.2 Å)
主引用文献Allosteric role of the citrate synthase homology domain of ATP citrate lyase.
Nat Commun, 14, 2023
6UUZ
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BU of 6uuz by Molmil
Structure of ACLY in the presence of citrate and CoA
分子名称: ATP-citrate synthase, COENZYME A
著者Xuepeng, W, Ronen, M.
登録日2019-11-01
公開日2020-01-01
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Molecular basis for acetyl-CoA production by ATP-citrate lyase.
Nat.Struct.Mol.Biol., 27, 2020

 

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