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PDB: 497 件

6JYA
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BU of 6jya by Molmil
Structure of dark-state marine bacterial chloride importer, NM-R3, with CW laser (ND-10%) at 95K.
分子名称: CHLORIDE ION, Chloride pumping rhodopsin, OLEIC ACID, ...
著者Yun, J.H, Ohki, M, Park, S.Y, Lee, W.
登録日2019-04-26
公開日2020-03-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.803 Å)
主引用文献Pumping mechanism of NM-R3, a light-driven bacterial chloride importer in the rhodopsin family.
Sci Adv, 6, 2020
6JYF
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BU of 6jyf by Molmil
Structure of light-state marine bacterial chloride importer, NM-R3, with Pulse laser (ND-1%) at 140K.
分子名称: CHLORIDE ION, Chloride pumping rhodopsin, OLEIC ACID, ...
著者Yun, J.H, Ohki, M, Park, S.Y, Lee, W.
登録日2019-04-26
公開日2020-03-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.004 Å)
主引用文献Pumping mechanism of NM-R3, a light-driven bacterial chloride importer in the rhodopsin family.
Sci Adv, 6, 2020
6JYE
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BU of 6jye by Molmil
Structure of dark-state marine bacterial chloride importer, NM-R3, with Pulse laser (ND-1%) at 140K.
分子名称: CHLORIDE ION, Chloride pumping rhodopsin, OLEIC ACID, ...
著者Yun, J.H, Ohki, M, Park, S.Y, Lee, W.
登録日2019-04-26
公開日2020-03-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Pumping mechanism of NM-R3, a light-driven bacterial chloride importer in the rhodopsin family.
Sci Adv, 6, 2020
6JY6
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BU of 6jy6 by Molmil
Structure of dark-state marine bacterial chloride importer, NM-R3, with Pulse laser (ND-1%) at 95K.
分子名称: CHLORIDE ION, Chloride pumping rhodopsin, OLEIC ACID, ...
著者Yun, J.H, Ohki, M, Park, S.Y, Lee, W.
登録日2019-04-26
公開日2020-03-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Pumping mechanism of NM-R3, a light-driven bacterial chloride importer in the rhodopsin family.
Sci Adv, 6, 2020
6JYC
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BU of 6jyc by Molmil
Structure of dark-state marine bacterial chloride importer, NM-R3, with CW laser (ND-30%) at 95K.
分子名称: CHLORIDE ION, Chloride pumping rhodopsin, OLEIC ACID, ...
著者Yun, J.H, Ohki, M, Park, S.Y, Lee, W.
登録日2019-04-26
公開日2020-03-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.892 Å)
主引用文献Pumping mechanism of NM-R3, a light-driven bacterial chloride importer in the rhodopsin family.
Sci Adv, 6, 2020
6JY8
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BU of 6jy8 by Molmil
Structure of dark-state marine bacterial chloride importer, NM-R3, with CW laser (ND-3%) at 95K.
分子名称: CHLORIDE ION, Chloride pumping rhodopsin, OLEIC ACID, ...
著者Yun, J.H, Ohki, M, Park, S.Y, Lee, W.
登録日2019-04-26
公開日2020-03-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Pumping mechanism of NM-R3, a light-driven bacterial chloride importer in the rhodopsin family.
Sci Adv, 6, 2020
6JY7
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BU of 6jy7 by Molmil
Structure of light-state marine bacterial chloride importer, NM-R3, with Pulse laser (ND-1%) at 95K.
分子名称: CHLORIDE ION, Chloride pumping rhodopsin, OLEIC ACID, ...
著者Yun, J.H, Ohki, M, Park, S.Y, Lee, W.
登録日2019-04-26
公開日2020-03-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Pumping mechanism of NM-R3, a light-driven bacterial chloride importer in the rhodopsin family.
Sci Adv, 6, 2020
6JYD
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BU of 6jyd by Molmil
Structure of light-state marine bacterial chloride importer, NM-R3, with CW laser (ND-30%) at 95K.
分子名称: CHLORIDE ION, Chloride pumping rhodopsin, OLEIC ACID, ...
著者Yun, J.H, Ohki, M, Park, S.Y, Lee, W.
登録日2019-04-26
公開日2020-03-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.007 Å)
主引用文献Pumping mechanism of NM-R3, a light-driven bacterial chloride importer in the rhodopsin family.
Sci Adv, 6, 2020
6JY9
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BU of 6jy9 by Molmil
Structure of light-state marine bacterial chloride importer, NM-R3, with CW laser (ND-3%) at 95K.
分子名称: CHLORIDE ION, Chloride pumping rhodopsin, OLEIC ACID, ...
著者Yun, J.H, Ohki, M, Park, S.Y, Lee, W.
登録日2019-04-26
公開日2020-03-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Pumping mechanism of NM-R3, a light-driven bacterial chloride importer in the rhodopsin family.
Sci Adv, 6, 2020
3AEH
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BU of 3aeh by Molmil
Integral membrane domain of autotransporter Hbp
分子名称: Hemoglobin-binding protease hbp autotransporter
著者Tajima, N, Park, S.-Y, Tame, J.R.H.
登録日2010-02-04
公開日2010-07-07
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A novel intein-like autoproteolytic mechanism in autotransporter proteins.
J.Mol.Biol., 402, 2010
6JYB
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BU of 6jyb by Molmil
Structure of light-state marine bacterial chloride importer, NM-R3, with CW laser (ND-10%) at 95K.
分子名称: CHLORIDE ION, Chloride pumping rhodopsin, OLEIC ACID, ...
著者Yun, J.H, Ohki, M, Park, S.Y, Lee, W.
登録日2019-04-26
公開日2020-03-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.802 Å)
主引用文献Pumping mechanism of NM-R3, a light-driven bacterial chloride importer in the rhodopsin family.
Sci Adv, 6, 2020
7XZ3
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BU of 7xz3 by Molmil
Crystal structure of the Type I-B CRISPR-associated protein, Csh2 from Thermobaculum terrenum
分子名称: CRISPR-associated protein, Csh2 family
著者Seo, P.W, Gu, D.H, Park, S.Y, Kim, J.S.
登録日2022-06-02
公開日2023-05-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.889 Å)
主引用文献Structural characterization of the type I-B CRISPR Cas7 from Thermobaculum terrenum.
Biochim Biophys Acta Proteins Proteom, 1871, 2023
2D5Z
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BU of 2d5z by Molmil
Crystal structure of T-state human hemoglobin complexed with three L35 molecules
分子名称: 2-[4-({[(3,5-DICHLOROPHENYL)AMINO]CARBONYL}AMINO)PHENOXY]-2-METHYLPROPANOIC ACID, Hemoglobin alpha subunit, Hemoglobin beta subunit, ...
著者Yokoyama, T, Neya, S, Tsuneshige, A, Yonetani, T, Park, S.Y, Tame, J.R.
登録日2005-11-08
公開日2006-03-07
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献R-state haemoglobin with low oxygen affinity: crystal structures of deoxy human and carbonmonoxy horse haemoglobin bound to the effector molecule L35
J.Mol.Biol., 356, 2006
2EXA
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BU of 2exa by Molmil
Crystal structure of penicillin binding protein 4 (dacB) from Escherichia coli, complexed with FAROM
分子名称: (2R,5R)-2-[(2S,3R)-3-hydroxy-1-oxobutan-2-yl]-5-[(2R)-tetrahydrofuran-2-yl]-2,5-dihydro-1,3-thiazole-4-carboxylic acid, GLYCEROL, Penicillin-binding protein 4
著者Kishida, H, Unzai, S, Roper, D.I, Lloyd, A, Park, S.-Y, Tame, J.R.H.
登録日2005-11-08
公開日2006-06-13
最終更新日2016-10-19
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of penicillin binding protein 4 (dacB) from Escherichia coli, both in the native form and covalently linked to various antibiotics
Biochemistry, 45, 2006
2EX8
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BU of 2ex8 by Molmil
Crystal structure of penicillin binding protein 4 (dacB) from Escherichia coli, complexed with penicillin-G
分子名称: OPEN FORM - PENICILLIN G, Penicillin-binding protein 4
著者Kishida, H, Unzai, S, Roper, D.I, Lloyd, A, Park, S.-Y, Tame, J.R.H.
登録日2005-11-08
公開日2006-06-13
最終更新日2016-10-19
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of penicillin binding protein 4 (dacB) from Escherichia coli, both in the native form and covalently linked to various antibiotics
Biochemistry, 45, 2006
2KYK
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BU of 2kyk by Molmil
The sandwich region between two LMP2A PY motif regulates the interaction between AIP4WW2domain and PY motif
分子名称: E3 ubiquitin-protein ligase Itchy homolog
著者Seo, M, Park, S, Seok, S, Kim, J, Cha, M, Lee, B.
登録日2010-05-28
公開日2011-06-01
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献The sandwich region between two LMP2A PY motif regulates the interaction between AIP4WW2domain and PY motif
To be Published
2EX9
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BU of 2ex9 by Molmil
Crystal structure of penicillin binding protein 4 (dacB) from Escherichia coli, complexed with penicillin-V
分子名称: (2R,4S)-5,5-dimethyl-2-{(1R)-2-oxo-1-[(phenoxyacetyl)amino]ethyl}-1,3-thiazolidine-4-carboxylic acid, GLYCEROL, Penicillin-binding protein 4
著者Kishida, H, Unzai, S, Roper, D.I, Lloyd, A, Park, S.-Y, Tame, J.R.H.
登録日2005-11-08
公開日2006-06-13
最終更新日2016-10-19
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structure of penicillin binding protein 4 (dacB) from Escherichia coli, both in the native form and covalently linked to various antibiotics
Biochemistry, 45, 2006
2EX6
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BU of 2ex6 by Molmil
Crystal structure of penicillin binding protein 4 (dacB) from Escherichia coli, complexed with ampicillin
分子名称: (2R,4S)-2-[(1R)-1-{[(2R)-2-amino-2-phenylacetyl]amino}-2-oxoethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid, GLYCEROL, Penicillin-binding protein 4
著者Kishida, H, Unzai, S, Roper, D.I, Lloyd, A, Park, S.-Y, Tame, J.R.H.
登録日2005-11-08
公開日2006-06-13
最終更新日2016-10-19
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of penicillin binding protein 4 (dacB) from Escherichia coli, both in the native form and covalently linked to various antibiotics
Biochemistry, 45, 2006
1UAN
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BU of 1uan by Molmil
Crystal structure of the conserved protein TT1542 from Thermus thermophilus HB8
分子名称: hypothetical protein TT1542
著者Handa, N, Terada, T, Tame, J.R.H, Park, S.-Y, Kinoshita, K, Ota, M, Nakamura, H, Kuramitsu, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-03-12
公開日2003-08-05
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of the conserved protein TT1542 from Thermus thermophilus HB8
PROTEIN SCI., 12, 2003
1UFI
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BU of 1ufi by Molmil
Crystal structure of the dimerization domain of human CENP-B
分子名称: Major centromere autoantigen B
著者Tawaramoto, M.S, Kurumizaka, H, Tanaka, Y, Park, S.-Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-05-30
公開日2004-02-17
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structure of the human centromere protein B (CENP-B) dimerization domain at 1.65-A resolution
J.Biol.Chem., 278, 2003
1IT3
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BU of 1it3 by Molmil
Hagfish CO ligand hemoglobin
分子名称: CARBON MONOXIDE, PROTOPORPHYRIN IX CONTAINING FE, hemoglobin
著者Mito, M, Chong, K.T, Park, S.-Y, Tame, J.R.
登録日2002-01-05
公開日2002-01-23
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structures of deoxy- and carbonmonoxyhemoglobin F1 from the hagfish Eptatretus burgeri
J.Biol.Chem., 277, 2002
3A3F
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BU of 3a3f by Molmil
Crystal structure of penicillin binding protein 4 (dacB) from Haemophilus influenzae,complexed with novel beta-lactam (FMZ)
分子名称: (2R,4S)-5,5-dimethyl-2-[(1R)-2-oxo-1-({(2R)-2-[(2-oxoimidazolidin-1-yl)amino]-2-phenylacetyl}amino)ethyl]-1,3-thiazolidine-4-carboxylic acid, Penicillin-binding protein 4
著者Kawai, F, Roper, D.I, Park, S.-Y, Tame, J.R.H.
登録日2009-06-12
公開日2009-12-22
最終更新日2013-11-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structures of penicillin-binding proteins 4 and 5 from Haemophilus influenzae
J.Mol.Biol., 396, 2010
3A3I
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BU of 3a3i by Molmil
Crystal structure of penicillin binding protein 4 (dacB) from Haemophilus influenzae, complexed with ampicillin (AIX)
分子名称: (2R,4S)-2-[(1R)-1-{[(2R)-2-amino-2-phenylacetyl]amino}-2-oxoethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid, Penicillin-binding protein 4
著者Kawai, F, Roper, D.I, Park, S.-Y, Tame, J.R.H.
登録日2009-06-12
公開日2009-12-22
最終更新日2013-11-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structures of penicillin-binding proteins 4 and 5 from Haemophilus influenzae
J.Mol.Biol., 396, 2010
2ZZS
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BU of 2zzs by Molmil
Crystal structure of cytochrome c554 from Vibrio parahaemolyticus strain RIMD2210633
分子名称: Cytochrome c554, GLYCEROL, HEME C
著者Akazaki, H, Kawai, F, Kumaki, Y, Sekine, K, Hakamata, W, Nishio, T, Park, S.-Y, Oku, T.
登録日2009-02-24
公開日2010-03-16
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of cytochrome c554 from Vibrio parahaemolyticus strain RIMD2210633
To be Published
1D06
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BU of 1d06 by Molmil
STRUCTURAL BASIS OF DIMERIZATION AND SENSORY MECHANISMS OF OXYGEN-SENSING DOMAIN OF RHIZOBIUM MELILOTI FIXL DETERMINED AT 1.4A RESOLUTION
分子名称: PROTOPORPHYRIN IX CONTAINING FE, nitrogen fixation regulatory protein fixL
著者Miyatake, H, Mukai, M, Park, S.-Y, Adachi, S, Tamura, K, Nakamura, H, Nakamura, K, Tsuchiya, T, Iizuka, T, Shiro, Y.
登録日1999-09-09
公開日2000-03-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Sensory mechanism of oxygen sensor FixL from Rhizobium meliloti: crystallographic, mutagenesis and resonance Raman spectroscopic studies
J.MOL.BIOL., 301, 2000

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