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PDB: 77 results

6B6F
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BU of 6b6f by Molmil
Beta-Lactamase, mixed with Ceftriaxone, needles crystal form, 2sec
Descriptor: Beta-lactamase, Ceftriaxone
Authors:Pandey, S, Schmidt, M.
Deposit date:2017-10-01
Release date:2018-06-27
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Enzyme intermediates captured "on the fly" by mix-and-inject serial crystallography.
BMC Biol., 16, 2018
4KL4
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BU of 4kl4 by Molmil
Crystal structure of Ribosome inactivating protein from Momordica balsamina complexed with Polyethylene glycol at 1.90 Angstrom resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Pandey, S, Tyagi, T.K, Singh, A, Bhushan, A, Kushwaha, G.S, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2013-05-07
Release date:2013-05-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of Ribosome inactivating protein from Momordica balsamina complexed with Polyethylene glycol at 1.90 Angstrom resolution
To be Published
5XPJ
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BU of 5xpj by Molmil
Crystal Structure of Periplasmic glucose binding protein ppGBP deletion mutant- Del-ppGBP
Descriptor: Binding protein component of ABC sugar transporter
Authors:Pandey, S, Phale, P.S, Bhaumik, P.
Deposit date:2017-06-02
Release date:2018-10-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural modulation of a periplasmic sugar-binding protein probes into its evolutionary ancestry.
J. Struct. Biol., 204, 2018
7MPB
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BU of 7mpb by Molmil
SARS Coronavirus-2 Main Protease 3CL-pro binding Ascorbate
Descriptor: 3C-like proteinase, ASCORBIC ACID, TRIFLUOROETHANOL
Authors:Pandey, S, Malla, T.N, Stojkovic, E.A, Schmidt, M.
Deposit date:2021-05-04
Release date:2021-05-12
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Vitamin C inhibits SARS coronavirus-2 main protease essential for viral replication
Biorxiv, 2021
4JTP
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BU of 4jtp by Molmil
Crystal structure of Ribosome inactivating protein from Momordica balsamina complexed with Ascorbic acid at 1.85 Angstrom resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ASCORBIC ACID, rRNA N-glycosidase
Authors:Pandey, S, Bhushan, A, Singh, A, Tyagi, T.K, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2013-03-24
Release date:2013-04-17
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of Ribosome inactivating protein from Momordica balsamina complexed with Ascorbic acid at 1.85 Angstrom resolution
TO BE PUBLISHED
4JTB
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BU of 4jtb by Molmil
Crystal structure of Ribosome inactivating protein from Momordica balsamina complexed with phosphate ion at 1.71 Angstrom resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, PHOSPHATE ION, rRNA N-glycosidase
Authors:Pandey, S, Tyagi, T.K, Singh, A, Kushwaha, G.S, Sinha, M, Bhushan, A, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2013-03-23
Release date:2013-04-17
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Crystal structure of Ribosome inactivating protein from Momordica balsamina complexed with phosphate ion at 1.71 Angstrom resolution
To be published
5DVF
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BU of 5dvf by Molmil
Crystal structure of unliganded periplasmic glucose binding protein (ppGBP) from P. putida CSV86
Descriptor: Binding protein component of ABC sugar transporter, SULFATE ION
Authors:Pandey, S, Modak, A, Phale, P.S, Bhaumik, P.
Deposit date:2015-09-21
Release date:2016-02-17
Last modified:2016-04-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:High Resolution Structures of Periplasmic Glucose-binding Protein of Pseudomonas putida CSV86 Reveal Structural Basis of Its Substrate Specificity
J.Biol.Chem., 291, 2016
5DVJ
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BU of 5dvj by Molmil
Crystal structure of galactose complexed periplasmic glucose binding protein (ppGBP) from P. putida CSV86
Descriptor: Binding protein component of ABC sugar transporter, GLYCEROL, SULFATE ION, ...
Authors:Pandey, S, Modak, A, Phale, P.S, Bhaumik, P.
Deposit date:2015-09-21
Release date:2016-02-17
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:High Resolution Structures of Periplasmic Glucose-binding Protein of Pseudomonas putida CSV86 Reveal Structural Basis of Its Substrate Specificity
J.Biol.Chem., 291, 2016
7FHZ
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BU of 7fhz by Molmil
Crystal structure of Multi-functional Polysaccharide lyase Smlt1473 (WT) from Stenotrophomonas maltophilia (strain K279a) in apo form at pH 9.0
Descriptor: Polysaccharide lyase, SULFATE ION
Authors:Pandey, S, Berger, B.W, Acharya, R.
Deposit date:2021-07-30
Release date:2021-10-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural insights into the mechanism of pH-selective substrate specificity of the polysaccharide lyase Smlt1473.
J.Biol.Chem., 297, 2021
7FI1
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BU of 7fi1 by Molmil
Crystal structure of Multi-functional Polysaccharide lyase Smlt1473 (WT) from Stenotrophomonas maltophilia (strain K279a) in ManA bound form at pH-7.0
Descriptor: Polysaccharide lyase, SULFATE ION, beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid
Authors:Pandey, S, Berger, B.W, Acharya, R.
Deposit date:2021-07-30
Release date:2021-10-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Structural insights into the mechanism of pH-selective substrate specificity of the polysaccharide lyase Smlt1473.
J.Biol.Chem., 297, 2021
7FI2
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BU of 7fi2 by Molmil
Crystal structure of Multi-functional Polysaccharide lyase Smlt1473-H168A from Stenotrophomonas maltophilia (strain K279a) at pH-5.0
Descriptor: DI(HYDROXYETHYL)ETHER, Polysaccharide lyase, SULFATE ION
Authors:Pandey, S, Berger, B.W, Acharya, R.
Deposit date:2021-07-30
Release date:2021-10-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural insights into the mechanism of pH-selective substrate specificity of the polysaccharide lyase Smlt1473.
J.Biol.Chem., 297, 2021
7FI0
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BU of 7fi0 by Molmil
Crystal structure of Multi-functional Polysaccharide lyase Smlt1473 (WT) from Stenotrophomonas maltophilia (strain K279a) in ManA bound form at pH-5.0
Descriptor: DI(HYDROXYETHYL)ETHER, Polysaccharide lyase, SULFATE ION, ...
Authors:Pandey, S, Berger, B.W, Acharya, R.
Deposit date:2021-07-30
Release date:2021-10-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Structural insights into the mechanism of pH-selective substrate specificity of the polysaccharide lyase Smlt1473.
J.Biol.Chem., 297, 2021
7FHY
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BU of 7fhy by Molmil
Crystal structure of Multi-functional Polysaccharide lyase Smlt1473 (WT) from Stenotrophomonas maltophilia (strain K279a) in apo form at pH 7.0
Descriptor: Polysaccharide lyase, SULFATE ION
Authors:Pandey, S, Berger, B.W, Acharya, R.
Deposit date:2021-07-30
Release date:2021-10-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural insights into the mechanism of pH-selective substrate specificity of the polysaccharide lyase Smlt1473.
J.Biol.Chem., 297, 2021
7FHX
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BU of 7fhx by Molmil
Crystal structure of Multi-functional Polysaccharide lyase Smlt1473 (WT) from Stenotrophomonas maltophilia (strain K279a) in apo form at pH 5.0
Descriptor: DI(HYDROXYETHYL)ETHER, Polysaccharide lyase, SULFATE ION
Authors:Pandey, S, Berger, B.W, Acharya, R.
Deposit date:2021-07-30
Release date:2021-10-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.63 Å)
Cite:Structural insights into the mechanism of pH-selective substrate specificity of the polysaccharide lyase Smlt1473.
J.Biol.Chem., 297, 2021
7FHU
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BU of 7fhu by Molmil
Crystal structure of Multi-functional Polysaccharide lyase Smlt1473 from Stenotrophomonas maltophilia (strain K279a) in apo form at pH 8.5
Descriptor: Polysaccharide lyase, SULFATE ION
Authors:Pandey, S, Berger, B.W, Acharya, R.
Deposit date:2021-07-30
Release date:2021-10-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Structural insights into the mechanism of pH-selective substrate specificity of the polysaccharide lyase Smlt1473.
J.Biol.Chem., 297, 2021
7FHV
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BU of 7fhv by Molmil
Crystal structure of Multi-functional Polysaccharide lyase Smlt1473 (WT) from Stenotrophomonas maltophilia (strain K279a) in apo form at pH 6.5
Descriptor: DI(HYDROXYETHYL)ETHER, Polysaccharide lyase, SULFATE ION
Authors:Pandey, S, Berger, B.W, Acharya, R.
Deposit date:2021-07-30
Release date:2021-10-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Structural insights into the mechanism of pH-selective substrate specificity of the polysaccharide lyase Smlt1473.
J.Biol.Chem., 297, 2021
7FHW
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BU of 7fhw by Molmil
Crystal structure of Multi-functional Polysaccharide lyase Smlt1473 from Stenotrophomonas maltophilia (strain K279a) in apo form at pH 5.5
Descriptor: Polysaccharide lyase
Authors:Pandey, S, Berger, B.W, Acharya, R.
Deposit date:2021-07-30
Release date:2021-10-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.061 Å)
Cite:Structural insights into the mechanism of pH-selective substrate specificity of the polysaccharide lyase Smlt1473.
J.Biol.Chem., 297, 2021
4O4Q
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BU of 4o4q by Molmil
Crystal structure of the complex formed between type 1 ribosome inactivating protein and uridine diphosphate at 1.81 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, URIDINE-5'-DIPHOSPHATE, ...
Authors:Yamini, S, Pandey, S, Bhushan, A, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2013-12-19
Release date:2014-01-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Crystal structure of the complex formed between type 1 ribosome inactivating protein and uridine diphosphate at 1.81 A resolution
To be Published
4XY7
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BU of 4xy7 by Molmil
Crystal structure of the complex of ribosome inactivating protein from Momordica balsamina with N-acetylglucosamine at 2.5 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Ribosome inactivating protein
Authors:Yamini, S, Pandey, S, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2015-02-02
Release date:2015-09-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of the complex of ribosome inactivating protein from Momordica balsamina with N- acetylglucosamine at 2.5 A resolution
To Be Published
4DWM
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BU of 4dwm by Molmil
Crystal structure of the complex of type I Ribosome inactivating protein with N-acetylglucosamine at 1.62 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, rRNA N-glycosidase
Authors:Yamini, S, Pandey, S, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2012-02-25
Release date:2012-03-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Crystal structure of the complex of type I Ribosome inactivating protein with N-acetylglucosamine at 1.62 A resolution
To be Published
6T3L
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BU of 6t3l by Molmil
PAS-GAF fragment from Deinococcus radiodurans phytochrome in dark state
Descriptor: 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium -2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3- yl]propanoic acid, Bacteriophytochrome
Authors:Claesson, E, Takala, H, Yuan Wahlgren, W, Pandey, S, Schmidt, M, Westenhoff, S.
Deposit date:2019-10-11
Release date:2020-04-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:The primary structural photoresponse of phytochrome proteins captured by a femtosecond X-ray laser.
Elife, 9, 2020
6T3U
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BU of 6t3u by Molmil
PAS-GAF fragment from Deinococcus radiodurans phytochrome 1ps after photoexcitation
Descriptor: 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium -2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3- yl]propanoic acid, Bacteriophytochrome
Authors:Claesson, E, Takala, H, Yuan Wahlgren, W, Pandey, S, Schmidt, M, Westenhoff, S.
Deposit date:2019-10-11
Release date:2020-04-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:The primary structural photoresponse of phytochrome proteins captured by a femtosecond X-ray laser.
Elife, 9, 2020
5ILW
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BU of 5ilw by Molmil
Crystal structure of the complex of type 1 Ribosome inactivating protein from Momordica balsamina with Uridine at 1.97 Angstrom resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Ribosome inactivating protein, ...
Authors:Singh, P.K, Pandey, S, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2016-03-05
Release date:2016-03-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Binding and structural studies of the complexes of type 1 ribosome inactivating protein from Momordica balsamina with uracil and uridine.
Proteins, 87, 2019
5ILX
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BU of 5ilx by Molmil
Crystal structure of Ribosome inactivating protein from Momordica balsamina with Uracil at 1.70 Angstrom resolution
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Ribosome inactivating protein, ...
Authors:Singh, P.K, Singh, A, Pandey, S, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2016-03-05
Release date:2016-03-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of Ribosome inactivating protein from Momordica balsamina with Uracil at 1.70 Angstrom resolution
To Be Published
4ZT8
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BU of 4zt8 by Molmil
Structure of the complex of type 1 ribosome inactivating protein from Momordica balsamina with a pyrimidine base, cytosine at 1.98 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 6-AMINOPYRIMIDIN-2(1H)-ONE, GLYCEROL, ...
Authors:Yamini, S, Pandey, S, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2015-05-14
Release date:2015-06-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Binding and structural studies of the complexes of type 1 ribosome inactivating protein fromMomordica balsaminawith cytosine, cytidine, and cytidine diphosphate.
Biochem Biophys Rep, 4, 2015

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PDB entries from 2024-09-04

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