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PDB: 59 results

1NPB
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Crystal structure of the fosfomycin resistance protein from transposon Tn2921
Descriptor: GLYCEROL, SULFATE ION, fosfomycin-resistance protein
Authors:Pakhomova, S, Rife, C.L, Armstrong, R.N, Newcomer, M.E.
Deposit date:2003-01-17
Release date:2004-03-02
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of fosfomycin resistance protein FosA from transposon Tn2921.
Protein Sci., 13, 2004
1FMJ
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BU of 1fmj by Molmil
CRYSTAL STRUCTURE OF MERCURY DERIVATIVE OF RETINOL DEHYDRATASE IN A COMPLEX WITH RETINOL AND PAP
Descriptor: ADENOSINE-3'-5'-DIPHOSPHATE, CALCIUM ION, MERCURY (II) ION, ...
Authors:Pakhomova, S, Kobayashi, M, Buck, J, Newcomer, M.E.
Deposit date:2000-08-17
Release date:2001-05-02
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:A helical lid converts a sulfotransferase to a dehydratase.
Nat.Struct.Biol., 8, 2001
1FML
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BU of 1fml by Molmil
CRYSTAL STRUCTURE OF RETINOL DEHYDRATASE IN A COMPLEX WITH RETINOL AND PAP
Descriptor: ADENOSINE-3'-5'-DIPHOSPHATE, CALCIUM ION, RETINOL, ...
Authors:Pakhomova, S, Kobayashi, M, Buck, J, Newcomer, M.E.
Deposit date:2000-08-17
Release date:2001-05-02
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:A helical lid converts a sulfotransferase to a dehydratase.
Nat.Struct.Biol., 8, 2001
3E4Y
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Crystal structure of a 33kDa catalase-related protein from Mycobacterium avium subsp. paratuberculosis. I2(1)2(1)2(1) crystal form
Descriptor: GLYCEROL, PHOSPHATE ION, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Pakhomova, S, Newcomer, M.E.
Deposit date:2008-08-12
Release date:2009-08-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The structure and peroxidase activity of a 33-kDa catalase-related protein from Mycobacterium avium ssp. paratuberculosis.
Protein Sci., 18, 2009
3E4W
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Crystal structure of a 33kDa catalase-related protein from Mycobacterium avium subsp. paratuberculosis. P2(1)2(1)2(1) crystal form.
Descriptor: GLYCEROL, HEXANE-1,6-DIOL, PHOSPHATE ION, ...
Authors:Pakhomova, S, Newcomer, M.E.
Deposit date:2008-08-12
Release date:2009-08-18
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The structure and peroxidase activity of a 33-kDa catalase-related protein from Mycobacterium avium ssp. paratuberculosis.
Protein Sci., 18, 2009
3D41
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Crystal structure of fosfomycin resistance kinase FomA from Streptomyces wedmorensis complexed with MgAMPPNP and fosfomycin
Descriptor: FOSFOMYCIN, FomA protein, MAGNESIUM ION, ...
Authors:Pakhomova, S, Bartlett, S.G, Augustus, A, Kuzuyama, T, Newcomer, M.E.
Deposit date:2008-05-13
Release date:2008-08-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of Fosfomycin Resistance Kinase FomA from Streptomyces wedmorensis.
J.Biol.Chem., 283, 2008
3D40
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BU of 3d40 by Molmil
Crystal structure of fosfomycin resistance kinase FomA from Streptomyces wedmorensis complexed with diphosphate
Descriptor: DIPHOSPHATE, FomA protein
Authors:Pakhomova, S, Bartlett, S.G, Augustus, A, Kuzuyama, T, Newcomer, M.E.
Deposit date:2008-05-13
Release date:2008-08-12
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Crystal Structure of Fosfomycin Resistance Kinase FomA from Streptomyces wedmorensis.
J.Biol.Chem., 283, 2008
1R8Y
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Crystal Structure of Mouse Glycine N-Methyltransferase (Monoclinic Form)
Descriptor: BETA-MERCAPTOETHANOL, glycine N-methyltransferase
Authors:Pakhomova, S, Luka, Z, Wagner, C, Newcomer, M.E.
Deposit date:2003-10-28
Release date:2004-09-21
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3 Å)
Cite:Glycine N-methyltransferases: a comparison of the crystal structures and kinetic properties of recombinant human, mouse and rat enzymes.
Proteins, 57, 2004
6NS2
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BU of 6ns2 by Molmil
Crystal structure of fungal lipoxygenase from Fusarium graminearum. P212121 crystal form.
Descriptor: FE (II) ION, lipoxygenase
Authors:Pakhomova, S, Boeglin, W.E, Neau, D.B, Bartlett, S.G, Brash, A.R, Newcomer, M.E.
Deposit date:2019-01-24
Release date:2019-03-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:An ensemble of lipoxygenase structures reveals novel conformations of the Fe coordination sphere.
Protein Sci., 28, 2019
6NS6
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BU of 6ns6 by Molmil
Crystal structure of fungal lipoxygenase from Fusarium graminearum. P21 crystal form.
Descriptor: FE (II) ION, lipoxygenase
Authors:Pakhomova, S, Boeglin, W.E, Neau, D.B, Bartlett, S.G, Brash, A.R, Newcomer, M.E.
Deposit date:2019-01-24
Release date:2019-03-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:An ensemble of lipoxygenase structures reveals novel conformations of the Fe coordination sphere.
Protein Sci., 28, 2019
1R8X
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BU of 1r8x by Molmil
Crystal Structure of Mouse Glycine N-Methyltransferase (Tetragonal Form)
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, BETA-MERCAPTOETHANOL, glycine N-methyltransferase
Authors:Pakhomova, S, Luka, Z, Wagner, C, Newcomer, M.E.
Deposit date:2003-10-28
Release date:2004-09-21
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Glycine N-methyltransferases: a comparison of the crystal structures and kinetic properties of recombinant human, mouse and rat enzymes.
Proteins, 57, 2004
6NS5
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Crystal structure of fungal lipoxygenase from Fusarium graminearum. Second C2 crystal form.
Descriptor: FE (II) ION, lipoxygenase
Authors:Pakhomova, S, Boeglin, W.E, Neau, D.B, Bartlett, S.G, Brash, A.R, Newcomer, M.E.
Deposit date:2019-01-24
Release date:2019-03-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:An ensemble of lipoxygenase structures reveals novel conformations of the Fe coordination sphere.
Protein Sci., 28, 2019
1R74
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BU of 1r74 by Molmil
Crystal Structure of Human Glycine N-Methyltransferase
Descriptor: BETA-MERCAPTOETHANOL, CITRIC ACID, Glycine N-methyltransferase
Authors:Pakhomova, S, Luka, Z, Wagner, C, Newcomer, M.E.
Deposit date:2003-10-17
Release date:2004-09-21
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Glycine N-methyltransferases: a comparison of the crystal structures and kinetic properties of recombinant human, mouse and rat enzymes.
Proteins, 57, 2004
6NS4
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BU of 6ns4 by Molmil
Crystal structure of fungal lipoxygenase from Fusarium graminearum. C2 crystal form.
Descriptor: ACETATE ION, FE (II) ION, GLYCEROL, ...
Authors:Pakhomova, S, Boeglin, W.E, Neau, D.B, Bartlett, S.G, Brash, A.R, Newcomer, M.E.
Deposit date:2019-01-24
Release date:2019-03-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:An ensemble of lipoxygenase structures reveals novel conformations of the Fe coordination sphere.
Protein Sci., 28, 2019
6NS3
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BU of 6ns3 by Molmil
Crystal structure of fungal lipoxygenase from Fusarium graminearum. I222 crystal form.
Descriptor: FE (II) ION, lipoxygenase
Authors:Pakhomova, S, Boeglin, W.E, Neau, D.B, Bartlett, S.G, Brash, A.R, Newcomer, M.E.
Deposit date:2019-01-24
Release date:2019-03-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.84 Å)
Cite:An ensemble of lipoxygenase structures reveals novel conformations of the Fe coordination sphere.
Protein Sci., 28, 2019
1X8J
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BU of 1x8j by Molmil
Crystal structure of retinol dehydratase in complex with androsterone and inactive cofactor PAP
Descriptor: ADENOSINE-3'-5'-DIPHOSPHATE, Androsterone, CALCIUM ION, ...
Authors:Pakhomova, S, Buck, J, Newcomer, M.E.
Deposit date:2004-08-18
Release date:2005-02-08
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:The structures of the unique sulfotransferase retinol dehydratase with product and inhibitors provide insight into enzyme mechanism and inhibition.
Protein Sci., 14, 2005
1X8L
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BU of 1x8l by Molmil
Crystal structure of retinol dehydratase in complex with all-trans-4-oxoretinol and inactive cofactor PAP
Descriptor: 4-OXORETINOL, ADENOSINE-3'-5'-DIPHOSPHATE, CALCIUM ION, ...
Authors:Pakhomova, S, Buck, J, Newcomer, M.E.
Deposit date:2004-08-18
Release date:2005-02-08
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The structures of the unique sulfotransferase retinol dehydratase with product and inhibitors provide insight into enzyme mechanism and inhibition.
Protein Sci., 14, 2005
1X8K
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BU of 1x8k by Molmil
Crystal structure of retinol dehydratase in complex with anhydroretinol and inactive cofactor PAP
Descriptor: ADENOSINE-3'-5'-DIPHOSPHATE, ANHYDRORETINOL, CALCIUM ION, ...
Authors:Pakhomova, S, Buck, J, Newcomer, M.E.
Deposit date:2004-08-18
Release date:2005-02-08
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:The structures of the unique sulfotransferase retinol dehydratase with product and inhibitors provide insight into enzyme mechanism and inhibition.
Protein Sci., 14, 2005
3QVF
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BU of 3qvf by Molmil
Crystal structure of fosfomycin resistance kinase FomA from Streptomyces wedmorensis complexed with MgADP and fosfomycin vanadate
Descriptor: ADENOSINE-5'-DIPHOSPHATE, FomA protein, MAGNESIUM ION, ...
Authors:Pakhomova, S, Bartlett, S.G, Doerner, P.A, Newcomer, M.E.
Deposit date:2011-02-25
Release date:2011-07-20
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural and biochemical insights into the mechanism of fosfomycin phosphorylation by fosfomycin resistance kinase FomA.
Biochemistry, 50, 2011
3QUR
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BU of 3qur by Molmil
Crystal structure of fosfomycin resistance kinase FomA from Streptomyces wedmorensis complexed with MgADP and fosfomycin monophosphate
Descriptor: ADENOSINE-5'-DIPHOSPHATE, FomA protein, MAGNESIUM ION, ...
Authors:Pakhomova, S, Bartlett, S.G, Doerner, P.A, Newcomer, M.E.
Deposit date:2011-02-24
Release date:2011-07-20
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Structural and biochemical insights into the mechanism of fosfomycin phosphorylation by fosfomycin resistance kinase FomA.
Biochemistry, 50, 2011
3QUN
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BU of 3qun by Molmil
Crystal structure of fosfomycin resistance kinase FomA from Streptomyces wedmorensis complexed with MgATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, FomA protein, GLYCEROL, ...
Authors:Pakhomova, S, Bartlett, S.G, Doerner, P.A, Newcomer, M.E.
Deposit date:2011-02-24
Release date:2011-07-20
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Structural and biochemical insights into the mechanism of fosfomycin phosphorylation by fosfomycin resistance kinase FomA.
Biochemistry, 50, 2011
3QUO
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BU of 3quo by Molmil
Crystal structure of fosfomycin resistance kinase FomA from Streptomyces wedmorensis complexed with ATP and fosfomycin
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, FOSFOMYCIN, FomA protein
Authors:Pakhomova, S, Bartlett, S.G, Doerner, P.A, Newcomer, M.E.
Deposit date:2011-02-24
Release date:2011-07-20
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Structural and biochemical insights into the mechanism of fosfomycin phosphorylation by fosfomycin resistance kinase FomA.
Biochemistry, 50, 2011
3QVH
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BU of 3qvh by Molmil
Crystal structure of fosfomycin resistance kinase FomA from Streptomyces wedmorensis complexed with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, FomA protein
Authors:Pakhomova, S, Bartlett, S.G, Doerner, P.A, Newcomer, M.E.
Deposit date:2011-02-25
Release date:2011-07-20
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural and biochemical insights into the mechanism of fosfomycin phosphorylation by fosfomycin resistance kinase FomA.
Biochemistry, 50, 2011
6E1F
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Crystal structure of the SWIRM domain of human histone lysine-specific demethylase LSD1
Descriptor: Lysine-specific histone demethylase 1A, SULFATE ION
Authors:Luka, Z, Pakhomova, S, Reiter, N.J.
Deposit date:2018-07-09
Release date:2019-07-10
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.16 Å)
Cite:Transient and highly ordered structural domains exist within the N-terminus of LSD1 and differentially interact with mononucleosomes
To be Published
4P9S
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BU of 4p9s by Molmil
Crystal structure of the mature form of rat DMGDH
Descriptor: Dimethylglycine dehydrogenase, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Luka, Z, Pakhomova, S, Loukachevitch, L.V, Newcomer, M.E, Wagner, C.
Deposit date:2014-04-04
Release date:2014-06-18
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Folate in demethylation: The crystal structure of the rat dimethylglycine dehydrogenase complexed with tetrahydrofolate.
Biochem.Biophys.Res.Commun., 449, 2014

 

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