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PDB: 37 件

4W7V
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Crystal structure of XacCel5A in complex with cellobiose
分子名称: Cellulase, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
著者Paiva, J.H, Murakami, M.T.
登録日2014-08-22
公開日2015-10-21
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.43 Å)
主引用文献Crystal structure of XacCel5A in complex with cellobiose
To Be Published
4W7U
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Crystal structure of XacCel5A in the native form
分子名称: CACODYLATE ION, Cellulase
著者Paiva, J.H, Murakami, M.T.
登録日2014-08-22
公開日2015-10-21
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Crystal structure of XacCel5A in the native form
To Be Published
4W7W
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High-resolution structure of XacCel5A in complex with cellopentaose
分子名称: Cellulase, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Paiva, J.H, Murakami, M.T.
登録日2014-08-22
公開日2015-10-21
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献High-resolution structure of XacCel5A in complex with cellopentaose
To Be Published
4M1R
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Structure of a novel cellulase 5 from a sugarcane soil metagenomic library
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Cellulase 5
著者Paiva, J.H, Alvarez, T.M, Cairo, J.P, Paixao, D.A, Almeida, R.A, Tonoli, C.C.C, Ruiz, D.M, Ruller, R, Santos, C.R, Squina, F.M, Murakami, M.T.
登録日2013-08-03
公開日2014-02-05
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure and function of a novel cellulase 5 from sugarcane soil metagenome.
Plos One, 8, 2013
5HOS
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Crystal structure of the endo-beta-1,4-glucanase Xac0029 from Xanthomonas axonopodis pv. citri
分子名称: Cellulase, SULFATE ION
著者Paiva, J.H, Murakami, M.T.
登録日2016-01-19
公開日2017-01-25
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of the endo-beta-1,4-glucanase Xac0029 from Xanthomonas axonopodis pv. citri
To Be Published
5HPC
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Structure of XacCel5A crystallized in the space group P41212
分子名称: Cellulase
著者Paiva, J.H, Murakami, M.T.
登録日2016-01-20
公開日2017-01-25
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure of XacCel5A crystallized in the space group P41212
To Be Published
5HNN
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Crystal structure of the endo-beta-1,4-glucanase (Xac0030) from Xanthomonas axonopodis pv. citri with the triple mutation His174Trp, Tyr211Ala and Lys227Arg.
分子名称: Cellulase, GLYCEROL
著者Paiva, J.H, Murakami, M.T.
登録日2016-01-18
公開日2017-01-25
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Crystal structure of the endo-beta-1,4-glucanase (Xac0030) from Xanthomonas axonopodis pv. citri with the triple mutation His174Trp, Tyr211Ala and Lys227Arg.
To Be Published
2L8A
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Structure of a novel CBM3 lacking the calcium-binding site
分子名称: Endoglucanase
著者Paiva, J.H, Meza, A.N, Sforca, M.L, Navarro, R.Z, Neves, J.L, Santos, C.R, Murakami, M.T, Zeri, A.C.
登録日2011-01-07
公開日2011-12-21
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Dissecting structure-function-stability relationships of a thermostable GH5-CBM3 cellulase from Bacillus subtilis 168.
Biochem.J., 441, 2012
4NKM
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Crystal structure of engineered anti-EE scFv antibody fragment
分子名称: Engineered scFv
著者Kalyoncu, S, Hyun, J, Pai, J.C, Johnson, J.L, Etzminger, K, Jain, A, Heaner Jr, D, Molares, I.A, Truskett, T.M, Maynard, J.A, Lieberman, R.L.
登録日2013-11-12
公開日2014-03-12
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (3.71 Å)
主引用文献Effects of protein engineering and rational mutagenesis on crystal lattice of single chain antibody fragments.
Proteins, 82, 2014
4NKD
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Crystal structure of engineered anti-EE scFv antibody fragment
分子名称: Engineered scFv
著者Kalyoncu, S, Hyun, J, Pai, J.C, Johnson, J.L, Etzminger, K, Jain, A, Heaner Jr, D, Molares, I.A, Truskett, T.M, Maynard, J.A, Lieberman, R.L.
登録日2013-11-12
公開日2014-03-12
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (3.303 Å)
主引用文献Effects of protein engineering and rational mutagenesis on crystal lattice of single chain antibody fragments.
Proteins, 82, 2014
4NKO
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Crystal structure of engineered anti-EE scFv antibody fragment
分子名称: Engineered scFv
著者Kalyoncu, S, Hyun, J, Pai, J.C, Johnson, J.L, Etzminger, K, Jain, A, Heaner Jr, D, Molares, I.A, Truskett, T.M, Maynard, J.A, Lieberman, R.L.
登録日2013-11-12
公開日2014-03-12
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (3.496 Å)
主引用文献Effects of protein engineering and rational mutagenesis on crystal lattice of single chain antibody fragments.
Proteins, 82, 2014
3NN8
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Crystal structure of engineered antibody fragment based on 3D5
分子名称: Engineered scFv
著者Lieberman, R.L, Maynard, J.A, Drury, J.E, Pai, J, Culver, J.A.
登録日2010-06-23
公開日2011-06-29
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Peptide-binding single chain Antibody fragment (SCFV) chaperones for protein co-crystallization
To be Published
5CG9
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NgTET1 in complex with 5mC DNA in space group P3221
分子名称: 1,2-ETHANEDIOL, 2-OXOGLUTARIC ACID, DNA (5'-D(*TP*GP*TP*CP*AP*GP*(5CM)P*GP*CP*AP*TP*GP*G)-3'), ...
著者Hashimoto, H, Pais, J.E, Dai, N, Zhang, X, Zheng, Y, Cheng, X.
登録日2015-07-09
公開日2015-09-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.693 Å)
主引用文献Structure of Naegleria Tet-like dioxygenase (NgTet1) in complexes with a reaction intermediate 5-hydroxymethylcytosine DNA.
Nucleic Acids Res., 43, 2015
5CG8
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NgTET1 in complex with 5hmC DNA
分子名称: 2-OXOGLUTARIC ACID, DNA (5'-D(*AP*GP*AP*AP*TP*TP*CP*CP*GP*TP*TP*CP*CP*A)-3'), DNA (5'-D(*TP*GP*GP*AP*AP*(5HC)P*GP*GP*AP*AP*TP*TP*CP*T)-3'), ...
著者Hashimoto, H, Pais, J.E, Dai, N, Zhang, X, Zheng, Y, Cheng, X.
登録日2015-07-09
公開日2015-09-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.702 Å)
主引用文献Structure of Naegleria Tet-like dioxygenase (NgTet1) in complexes with a reaction intermediate 5-hydroxymethylcytosine DNA.
Nucleic Acids Res., 43, 2015
4LT5
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BU of 4lt5 by Molmil
Structure of a Naegleria Tet-like dioxygenase in complex with 5-methylcytosine DNA
分子名称: 1,2-ETHANEDIOL, DNA, MANGANESE (II) ION, ...
著者Hashimoto, H, Pais, J.E, Zhang, X, Saleh, L, Fu, Z.Q, Dai, N, Correa, I.R, Roberts, R.J, Zheng, Y, Cheng, X.
登録日2013-07-23
公開日2013-12-18
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.893 Å)
主引用文献Structure of a Naegleria Tet-like dioxygenase in complex with 5-methylcytosine DNA.
Nature, 506, 2014
4X2Q
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Crystal Structure of Human Aldehyde Dehydrogenase, ALDH1a2
分子名称: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Retinal dehydrogenase 2
著者Stenkamp, R.E, Le Trong, I, Amory, J.K, Paik, J, Goldstein, A.S.
登録日2014-11-26
公開日2015-12-02
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.94 Å)
主引用文献Synthesis and In Vitro Testing of Bisdichloroacetyldiamine Analogs for Use as a Reversible Male Contraceptive
To Be Published
7AE9
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Crystal structure of mono-AMPylated HEPN(R46E) toxin in complex with MNT antitoxin
分子名称: 2',3'-DIDEOXYADENOSINE-5'-MONOPHOSPHATE, HEPN toxin, MNT ANTITOXIN
著者Tamulaitiene, G, Sasnauskas, G, Songailiene, I, Juozapaitis, J, Siksnys, V.
登録日2020-09-17
公開日2020-12-30
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献HEPN-MNT Toxin-Antitoxin System: The HEPN Ribonuclease Is Neutralized by OligoAMPylation.
Mol.Cell, 80, 2020
7AE8
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Crystal structure of HEPN(R102A) toxin
分子名称: ACETATE ION, HEPN toxin
著者Tamulaitiene, G, Sasnauskas, G, Songailiene, I, Juozapaitis, J, Siksnys, V.
登録日2020-09-17
公開日2020-12-30
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献HEPN-MNT Toxin-Antitoxin System: The HEPN Ribonuclease Is Neutralized by OligoAMPylation.
Mol.Cell, 80, 2020
7AER
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Rebuilt and re-refined PDB entry 5yep: tri-AMPylated Shewanella oneidensis HEPN toxin in complex with MNT antitoxin
分子名称: ADENOSINE MONOPHOSPHATE, Toxin-antitoxin system antidote Mnt family, Toxin-antitoxin system toxin HepN family
著者Tamulaitiene, G, Sasnauskas, G, Songailiene, I, Juozapaitis, J, Siksnys, V.
登録日2020-09-18
公開日2020-12-30
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献HEPN-MNT Toxin-Antitoxin System: The HEPN Ribonuclease Is Neutralized by OligoAMPylation.
Mol.Cell, 80, 2020
7AE6
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Crystal structure of di-AMPylated HEPN(R102A) toxin
分子名称: 1,2-ETHANEDIOL, ADENOSINE MONOPHOSPHATE, HEPN toxin
著者Tamulaitiene, G, Sasnauskas, G, Songailiene, I, Juozapaitis, J, Siksnys, V.
登録日2020-09-17
公開日2020-12-30
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献HEPN-MNT Toxin-Antitoxin System: The HEPN Ribonuclease Is Neutralized by OligoAMPylation.
Mol.Cell, 80, 2020
6UFW
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Crystal structure of the CBM3 from Bacillus subtilis at 1.28 angstrom resolution
分子名称: Endoglucanase
著者Morais, M.A.B, Paiva, J.H, Murakami, M.T.
登録日2019-09-25
公開日2020-09-30
実験手法X-RAY DIFFRACTION (1.28 Å)
主引用文献Crystal structure of the CBM3 from Bacillus subtilis at 1.28 angstrom resolution
To Be Published
7AE2
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Crystal structure of HEPN(H107A-Y109F) toxin in complex with MNT antitoxin
分子名称: HEPN toxin, MNT ANTITOXIN
著者Tamulaitiene, G, Sasnauskas, G, Songailiene, I, Juozapaitis, J, Siksnys, V.
登録日2020-09-17
公開日2020-12-30
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献HEPN-MNT Toxin-Antitoxin System: The HEPN Ribonuclease Is Neutralized by OligoAMPylation.
Mol.Cell, 80, 2020
2FCZ
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HIV-1 DIS kissing-loop in complex with ribostamycin
分子名称: HIV-1 DIS RNA, POTASSIUM ION, RIBOSTAMYCIN
著者Ennifar, E, Paillart, J.C, Marquet, R, Dumas, P.
登録日2005-12-13
公開日2006-05-16
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Targeting the dimerization initiation site of HIV-1 RNA with aminoglycosides: from crystal to cell.
Nucleic Acids Res., 34, 2006
2FCY
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HIV-1 DIS kissing-loop in complex with Neomycin
分子名称: CHLORIDE ION, HIV-1 DIS RNA, NEOMYCIN, ...
著者Ennifar, E, Paillart, J.C, Marquet, R, Dumas, P.
登録日2005-12-13
公開日2006-05-16
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Targeting the dimerization initiation site of HIV-1 RNA with aminoglycosides: from crystal to cell.
Nucleic Acids Res., 34, 2006
2FCX
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HIV-1 DIS kissing-loop in complex with neamine
分子名称: (1R,2R,3S,4R,6S)-4,6-diamino-2,3-dihydroxycyclohexyl 2,6-diamino-2,6-dideoxy-alpha-D-glucopyranoside, CHLORIDE ION, HIV-1 DIS RNA, ...
著者Ennifar, E, Paillart, J.C, Marquet, R, Dumas, P.
登録日2005-12-13
公開日2006-05-16
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Targeting the dimerization initiation site of HIV-1 RNA with aminoglycosides: from crystal to cell.
Nucleic Acids Res., 34, 2006

 

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