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PDB: 46130 results

1B97
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BU of 1b97 by Molmil
ANALYSIS OF A MUTATIONAL HOT-SPOT IN THE ECORV RESTRICTION ENDONUCLEASE: A CATALYTIC ROLE FOR A MAIN CHAIN CARBONYL GROUP
Descriptor: DNA (5'-D(*AP*AP*AP*GP*AP*TP*AP*TP*CP*TP*T)-3'), RESTRICTION ENDONUCLEASE ECORV
Authors:Thomas, M.P, Halford, S.E, Brady, R.L.
Deposit date:1999-02-19
Release date:1999-02-26
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural analysis of a mutational hot-spot in the EcoRV restriction endonuclease: a catalytic role for a main chain carbonyl group.
Nucleic Acids Res., 27, 1999
6GMH
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BU of 6gmh by Molmil
Structure of activated transcription complex Pol II-DSIF-PAF-SPT6
Descriptor: CDC73, CTR9,RNA polymerase-associated protein CTR9 homolog,RNA polymerase-associated protein CTR9 homolog, DNA-directed RNA polymerase II subunit RPB9, ...
Authors:Vos, S.M, Farnung, L, Boehing, M, Linden, A, Wigge, C, Urlaub, H, Cramer, P.
Deposit date:2018-05-26
Release date:2018-08-22
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structure of activated transcription complex Pol II-DSIF-PAF-SPT6.
Nature, 560, 2018
2OIU
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BU of 2oiu by Molmil
L1 Ribozyme Ligase circular adduct
Descriptor: L1 Ribozyme RNA Ligase, MAGNESIUM ION
Authors:Robertson, M.P, Scott, W.G.
Deposit date:2007-01-11
Release date:2007-03-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The structural basis of ribozyme-catalyzed RNA assembly.
Science, 315, 2007
4PZF
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BU of 4pzf by Molmil
Berberine bridge enzyme G164A variant, a reticuline dehydrogenase
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, DODECAETHYLENE GLYCOL, ...
Authors:Zafred, D, Wallner, S, Steiner, B, Macheroux, P.
Deposit date:2014-03-30
Release date:2014-04-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Rationally engineered flavin-dependent oxidase reveals steric control of dioxygen reduction.
Febs J., 282, 2015
7SYS
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BU of 7sys by Molmil
Structure of the delta dII IRES eIF2-containing 48S initiation complex, closed conformation. Structure 12(delta dII).
Descriptor: 18S rRNA, Eukaryotic translation initiation factor 1A, X-chromosomal, ...
Authors:Brown, Z.P, Abaeva, I.S, De, S, Hellen, C.U.T, Pestova, T.V, Frank, J.
Deposit date:2021-11-25
Release date:2022-07-27
Last modified:2022-08-24
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Molecular architecture of 40S translation initiation complexes on the hepatitis C virus IRES.
Embo J., 41, 2022
7SYQ
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BU of 7syq by Molmil
Structure of the wt IRES and 40S ribosome ternary complex, open conformation. Structure 11(wt)
Descriptor: 18S rRNA, Eukaryotic translation initiation factor 1A, X-chromosomal, ...
Authors:Brown, Z.P, Abaeva, I.S, De, S, Hellen, C.U.T, Pestova, T.V, Frank, J.
Deposit date:2021-11-25
Release date:2022-07-27
Last modified:2022-08-24
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Molecular architecture of 40S translation initiation complexes on the hepatitis C virus IRES.
Embo J., 41, 2022
6TK1
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BU of 6tk1 by Molmil
Femtosecond to millisecond structural changes in a light-driven sodium pump: 20ms structure of KR2 with extrapolated, light and dark datasets
Descriptor: EICOSANE, RETINAL, SODIUM ION, ...
Authors:Skopintsev, P, Ehrenberg, D, Weinert, T, James, D, Kar, R, Johnson, P, Ozerov, D, Furrer, A, Martiel, I, Dworkowski, F, Nass, K, Knopp, G, Cirelli, C, Gashi, D, Mous, S, Wranik, M, Gruhl, T, Kekilli, D, Bruenle, S, Deupi, X, Schertler, G.F.X, Benoit, R, Panneels, V, Nogly, P, Schapiro, I, Milne, C, Heberle, J, Standfuss, J.
Deposit date:2019-11-28
Release date:2020-05-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Femtosecond-to-millisecond structural changes in a light-driven sodium pump.
Nature, 583, 2020
7SYR
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BU of 7syr by Molmil
Structure of the wt IRES eIF2-containing 48S initiation complex, closed conformation. Structure 12(wt).
Descriptor: 18S rRNA, Eukaryotic translation initiation factor 1A, X-chromosomal, ...
Authors:Brown, Z.P, Abaeva, I.S, De, S, Hellen, C.U.T, Pestova, T.V, Frank, J.
Deposit date:2021-11-25
Release date:2022-07-27
Last modified:2022-08-24
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Molecular architecture of 40S translation initiation complexes on the hepatitis C virus IRES.
Embo J., 41, 2022
7LDJ
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BU of 7ldj by Molmil
SARS-CoV-2 receptor binding domain in complex with WNb-2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-alpha-D-mannopyranose-(1-6)-alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Nanobody 2, ...
Authors:Pymm, P, Dietrich, M.H, Tan, L.L, Adair, A, Tham, W.H.
Deposit date:2021-01-13
Release date:2021-05-05
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:SARS-CoV-2 receptor binding domain in complex with WNb-2
Proc.Natl.Acad.Sci.USA, 2021
6O30
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BU of 6o30 by Molmil
Lipid A transporter MsbA from Salmonella typhimurium
Descriptor: Lipid A export ATP-binding/permease protein MsbA
Authors:Padayatti, P.S, Zhang, Q, Wilson, I.A, Lee, S.C, Stanfield, R.L.
Deposit date:2019-02-25
Release date:2019-06-12
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (4.47 Å)
Cite:Structural Insights into the Lipid A Transport Pathway in MsbA.
Structure, 27, 2019
8CFW
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BU of 8cfw by Molmil
Crystal structure of S-adenosyl-L-homocysteine hydrolase from P. aeruginosa in complex with F2X-Entry library fragment H05
Descriptor: 6-methyl-N~4~-[(pyridin-3-yl)methyl]pyrimidine-2,4-diamine, ADENINE, Adenosylhomocysteinase, ...
Authors:Malecki, P.H, Gawel, M, Stepniewska, M, Brzezinski, K.
Deposit date:2023-02-03
Release date:2024-02-21
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Crystal structure of S-adenosyl-L-homocysteine hydrolase from P. aeruginosa in complex with fragment F2X-Entry H05
To be published
6TK5
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BU of 6tk5 by Molmil
Femtosecond to millisecond structural changes in a light-driven sodium pump: 800fs+2ps structure of KR2 with extrapolated, light and dark datasets
Descriptor: EICOSANE, RETINAL, Sodium pumping rhodopsin
Authors:Skopintsev, P, Ehrenberg, D, Weinert, T, James, D, Kar, R, Johnson, P, Ozerov, D, Furrer, A, Martiel, I, Dworkowski, F, Nass, K, Knopp, G, Cirelli, C, Gashi, D, Mous, S, Wranik, M, Gruhl, T, Kekilli, D, Bruenle, S, Deupi, X, Schertler, G.F.X, Benoit, R, Panneels, V, Nogly, P, Schapiro, I, Milne, C, Heberle, J, Standfuss, J.
Deposit date:2019-11-28
Release date:2020-05-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Femtosecond-to-millisecond structural changes in a light-driven sodium pump.
Nature, 583, 2020
8CFS
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BU of 8cfs by Molmil
Crystal structure of S-adenosyl-L-homocysteine hydrolase from P. aeruginosa in complex with F2X-Entry library fragment G11
Descriptor: ADENINE, Adenosylhomocysteinase, GLYCEROL, ...
Authors:Malecki, P.H, Gawel, M, Stepniewska, M, Brzezinski, K.
Deposit date:2023-02-03
Release date:2024-02-21
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Crystal structure of S-adenosyl-L-homocysteine hydrolase from P. aeruginosa in complex with fragment F2X-Entry G11
To be published
8CFG
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BU of 8cfg by Molmil
Crystal structure of S-adenosyl-L-homocysteine hydrolase from P. aeruginosa in complex with F2X-Entry library fragment C04
Descriptor: 2-hydrazinyl-4-methoxypyrimidine, ADENINE, Adenosylhomocysteinase, ...
Authors:Malecki, P.H, Gawel, M, Stepniewska, M, Brzezinski, K.
Deposit date:2023-02-03
Release date:2024-02-21
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Crystal structure of S-adenosyl-L-homocysteine hydrolase from P. aeruginosa in complex with fragment F2X-Entry C04
To be published
8CDM
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BU of 8cdm by Molmil
Plasmodium falciparum Myosin A full-length, post-rigor state complexed to the inhibitor KNX-002
Descriptor: 1,2-ETHANEDIOL, 1-(4-methoxyphenyl)-~{N}-[(3-thiophen-2-yl-1~{H}-pyrazol-4-yl)methyl]cyclopropan-1-amine, Myosin A tail domain interacting protein, ...
Authors:Moussaoui, D, Robblee, J.P, Robert-Paganin, J, Auguin, D, Fisher, F, Fagnant, P.M, MacFarlane, J.E, Mueller-Dieckmann, C, Baum, J, Trybus, K.M, Houdusse, A.
Deposit date:2023-01-31
Release date:2024-02-21
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Mechanism of small molecule inhibition of Plasmodium falciparum myosin A informs antimalarial drug design.
Nat Commun, 14, 2023
8CFJ
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BU of 8cfj by Molmil
Crystal structure of S-adenosyl-L-homocysteine hydrolase from P. aeruginosa in complex with F2X-Entry library fragment D10
Descriptor: 2-methyl-N-(4-methylphenyl)-L-alanine, ADENINE, Adenosylhomocysteinase, ...
Authors:Malecki, P.H, Gawel, M, Stepniewska, M, Brzezinski, K.
Deposit date:2023-02-03
Release date:2024-02-21
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Crystal structure of S-adenosyl-L-homocysteine hydrolase from P. aeruginosa in complex with fragment F2X-Entry D10
To be published
8CG1
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BU of 8cg1 by Molmil
Crystal structure of S-adenosyl-L-homocysteine hydrolase from P. aeruginosa in complex with F2X-Entry library fragment H12
Descriptor: ADENINE, Adenosylhomocysteinase, DIMETHYL SULFOXIDE, ...
Authors:Malecki, P.H, Gawel, M, Stepniewska, M, Brzezinski, K.
Deposit date:2023-02-03
Release date:2024-02-21
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Crystal structure of S-adenosyl-L-homocysteine hydrolase from P. aeruginosa in complex with fragment F2X-Entry H12
To be published
5WUY
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BU of 5wuy by Molmil
Crystal structure of chorismate synthase from Acinetobacter baumannii at 2.50A resolution
Descriptor: Chorismate synthase
Authors:Iqbal, N, Chaudhary, A, Shukla, K.P, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2016-12-21
Release date:2017-01-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of chorismate synthase from Acinetobacter baumannii at 2.50A resolution
To Be Published
8CFV
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BU of 8cfv by Molmil
Crystal structure of S-adenosyl-L-homocysteine hydrolase from P. aeruginosa in complex with F2X-Entry library fragment H04
Descriptor: ADENINE, Adenosylhomocysteinase, DIMETHYL SULFOXIDE, ...
Authors:Malecki, P.H, Gawel, M, Stepniewska, M, Brzezinski, K.
Deposit date:2023-02-03
Release date:2024-02-21
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Crystal structure of S-adenosyl-L-homocysteine hydrolase from P. aeruginosa in complex with fragment F2X-Entry H04
To be published
8CFP
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BU of 8cfp by Molmil
Crystal structure of S-adenosyl-L-homocysteine hydrolase from P. aeruginosa in complex with F2X-Entry library fragment F09
Descriptor: 4-pyridin-2-ylphenol, ADENINE, Adenosylhomocysteinase, ...
Authors:Malecki, P.H, Gawel, M, Stepniewska, M, Brzezinski, K.
Deposit date:2023-02-03
Release date:2024-02-21
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Crystal structure of S-adenosyl-L-homocysteine hydrolase from P. aeruginosa in complex with fragment F2X-Entry F09
To be published
8CFX
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BU of 8cfx by Molmil
Crystal structure of S-adenosyl-L-homocysteine hydrolase from P. aeruginosa in complex with F2X-Entry library fragment H06
Descriptor: ADENINE, Adenosylhomocysteinase, DIMETHYL SULFOXIDE, ...
Authors:Malecki, P.H, Gawel, M, Stepniewska, M, Brzezinski, K.
Deposit date:2023-02-03
Release date:2024-02-21
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Crystal structure of S-adenosyl-L-homocysteine hydrolase from P. aeruginosa in complex with fragment F2X-Entry H06
To be published
8CFR
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BU of 8cfr by Molmil
Crystal structure of S-adenosyl-L-homocysteine hydrolase from P. aeruginosa in complex with F2X-Entry library fragment G03
Descriptor: 3-ethoxybenzene-1-carboximidamide, ADENINE, Adenosylhomocysteinase, ...
Authors:Malecki, P.H, Gawel, M, Stepniewska, M, Brzezinski, K.
Deposit date:2023-02-03
Release date:2024-02-21
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Crystal structure of S-adenosyl-L-homocysteine hydrolase from P. aeruginosa in complex with fragment F2X-Entry G03
To be published
8CFY
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BU of 8cfy by Molmil
Crystal structure of S-adenosyl-L-homocysteine hydrolase from P. aeruginosa in complex with F2X-Entry library fragment H08
Descriptor: ADENINE, Adenosylhomocysteinase, DIMETHYL SULFOXIDE, ...
Authors:Malecki, P.H, Gawel, M, Stepniewska, M, Brzezinski, K.
Deposit date:2023-02-03
Release date:2024-02-21
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Crystal structure of S-adenosyl-L-homocysteine hydrolase from P. aeruginosa in complex with fragment F2X-Entry H08
To be published
7LPS
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BU of 7lps by Molmil
Crystal structure of DDB1-CRBN-ALV1 complex bound to Helios (IKZF2 ZF2)
Descriptor: 3-[3-[[1-[(3~{S})-2,6-bis(oxidanylidene)piperidin-3-yl]-2,5-bis(oxidanylidene)pyrrol-3-yl]amino]phenyl]-~{N}-(3-chloranyl-4-methyl-phenyl)propanamide, DNA damage-binding protein 1, Protein cereblon, ...
Authors:Nowak, R.P, Fischer, E.S.
Deposit date:2021-02-12
Release date:2021-06-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.78 Å)
Cite:Acute pharmacological degradation of Helios destabilizes regulatory T cells.
Nat.Chem.Biol., 17, 2021
7SPL
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BU of 7spl by Molmil
[2T3] Self-assembling 3D DNA triangle with three inter-junction base pairs containing the L1 junction and a zero-linked center strand
Descriptor: 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE, DNA (5'-D(*GP*AP*C)-3'), DNA (5'-D(*TP*CP*TP*GP*AP*TP*GP*TP*CP*C)-3'), ...
Authors:Vecchioni, S, Lu, B, Sha, R, Ohayon, Y.P, Seeman, N.C.
Deposit date:2021-11-02
Release date:2022-11-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (6.09 Å)
Cite:The Rule of Thirds: Controlling Junction Chirality and Polarity in 3D DNA Tiles.
Small, 19, 2023

224931

數據於2024-09-11公開中

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