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PDB: 46375 件

8QN1
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OPR3 variant - R283D
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 12-oxophytodienoate reductase 3, FLAVIN MONONUCLEOTIDE
著者Bijelic, A, Macheroux, P, Kerschbaumer, B.
登録日2023-09-25
公開日2024-08-14
最終更新日2024-08-21
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Analysis of homodimer formation in 12-oxophytodienoate reductase 3 in solutio and crystallo challenges the physiological role of the dimer.
Sci Rep, 14, 2024
4DN0
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PelD 156-455 from Pseudomonas aeruginosa PA14 in complex with c-di-GMP
分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), Putative uncharacterized protein pelD, SODIUM ION, ...
著者Whitney, J.C, Colvin, K.M, Marmont, L.S, Robinson, H, Parsek, M.R, Howell, P.L.
登録日2012-02-08
公開日2012-05-23
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of the Cytoplasmic Region of PelD, a Degenerate Diguanylate Cyclase Receptor That Regulates Exopolysaccharide Production in Pseudomonas aeruginosa.
J.Biol.Chem., 287, 2012
4DOO
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Crystal structure of Arabidopsis thaliana fatty-acid binding protein At3g63170 (AtFAP1)
分子名称: Chalcone-flavanone isomerase family protein, LAURIC ACID, POTASSIUM ION
著者Noel, J.P, Pojer, F, Louie, G.V, Bowman, M.E.
登録日2012-02-09
公開日2012-05-09
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Evolution of the chalcone-isomerase fold from fatty-acid binding to stereospecific catalysis.
Nature, 485, 2012
1W4F
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BU of 1w4f by Molmil
Peripheral-subunit from mesophilic, thermophilic and hyperthermophilic bacteria fold by ultrafast, apparently two-state transitions
分子名称: DIHYDROLIPOYLLYSINE-RESIDUE ACETYLTRANSFERASE
著者Ferguson, N, Sharpe, T.D, Schartau, P.J, Allen, M.D, Johnson, C.M, Fersht, A.R.
登録日2004-07-23
公開日2005-07-20
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Ultra-Fast Barrier-Limited Folding in the Peripheral Subunit-Binding Domain Family.
J.Mol.Biol., 353, 2005
3GEY
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Crystal structure of human poly(ADP-ribose) polymerase 15, catalytic fragment in complex with an inhibitor Pj34
分子名称: N~2~,N~2~-DIMETHYL-N~1~-(6-OXO-5,6-DIHYDROPHENANTHRIDIN-2-YL)GLYCINAMIDE, Poly [ADP-ribose] polymerase 15
著者Karlberg, T, Siponen, M.I, Arrowsmith, C.H, Berglund, H, Bountra, C, Collins, R, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, A, Johansson, I, Kotenyova, T, Moche, M, Nordlund, P, Nyman, T, Persson, C, Sagemark, J, Schutz, P, Thorsell, A.G, Tresaugues, L, Van Den Berg, S, Weigelt, J, Welin, M, Wisniewska, M, Schuler, H, Structural Genomics Consortium (SGC)
登録日2009-02-26
公開日2009-03-24
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural Basis for Lack of ADP-ribosyltransferase Activity in Poly(ADP-ribose) Polymerase-13/Zinc Finger Antiviral Protein.
J.Biol.Chem., 290, 2015
4DB6
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Designed Armadillo repeat protein (YIIIM3AII)
分子名称: Armadillo repeat protein
著者Madhurantakam, C, Varadamsetty, G, Grutter, M.G, Pluckthun, A, Mittl, P.R.E.
登録日2012-01-13
公開日2012-05-16
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure-based optimization of designed Armadillo-repeat proteins.
Protein Sci., 21, 2012
5QIW
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BU of 5qiw by Molmil
Covalent fragment group deposition -- Crystal Structure of OUTB2 in complex with PCM-0102660
分子名称: N-[(E)-(4-methylphenyl)methylidene]acetamide, UNKNOWN LIGAND, Ubiquitin thioesterase OTUB2
著者Sethi, R, Douangamath, A, Resnick, E, Bradley, A.R, Collins, P, Brandao-Neto, J, Talon, R, Krojer, T, Bountra, C, Arrowsmith, C.H, Edwards, A, London, N, von Delft, F.
登録日2018-08-10
公開日2019-12-18
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献Covalent fragment group deposition
To Be Published
7R6A
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BU of 7r6a by Molmil
Crystal structure of mutant L124D/R125A/C273S of L-Asparaginase I from Yersinia pestis
分子名称: FORMIC ACID, L-asparaginase I
著者Strzelczyk, P, Wlodawer, A, Lubkowski, J.
登録日2021-06-22
公開日2022-07-06
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献The dimeric form of bacterial l-asparaginase YpAI is fully active.
Febs J., 290, 2023
2KB3
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BU of 2kb3 by Molmil
NMR Structure of the phosphorylated form of OdhI, pOdhI.
分子名称: Oxoglutarate dehydrogenase inhibitor
著者Barthe, P, Roumestand, C, Canova, M, Hurard, C, Molle, V, Cohen-Gonsaud, M.
登録日2008-11-20
公開日2009-05-05
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Dynamic and Structural Characterization of a Bacterial FHA Protein Reveals a New Autoinhibition Mechanism.
Structure, 17, 2009
2KFS
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BU of 2kfs by Molmil
NMR structure of Rv2175c
分子名称: Conserved hypothetical regulatory protein
著者Barthe, P, Cohen-Gonsaud, M, Roumestand, C, Molle, V.
登録日2009-02-27
公開日2009-05-19
最終更新日2024-05-08
実験手法SOLUTION NMR
主引用文献The Mycobacterium tuberculosis Ser/Thr Kinase Substrate Rv2175c Is a DNA-binding Protein Regulated by Phosphorylation.
J.Biol.Chem., 284, 2009
1VJB
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BU of 1vjb by Molmil
crystal structure of the ligand-binding domain of the estrogen-related receptor gamma in complex with 4-hydroxytamoxifen
分子名称: 4-HYDROXYTAMOXIFEN, Estrogen-related receptor gamma
著者Greschik, H, Flaig, R, Renaud, J.P, Moras, D.
登録日2004-02-03
公開日2004-06-08
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural Basis for the Deactivation of the Estrogen-related Receptor {gamma} by Diethylstilbestrol or 4-Hydroxytamoxifen and Determinants of Selectivity.
J.Biol.Chem., 279, 2004
4DD1
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BU of 4dd1 by Molmil
EVAL processed HEWL, cisplatin aqueous paratone
分子名称: 2-methylprop-1-ene, Lysozyme C
著者Tanley, S.W, Schreurs, A.M, Kroon-Batenburg, L.M, Meredith, J, Prendergast, R, Walsh, D, Bryant, P, Levy, C, Helliwell, J.R.
登録日2012-01-18
公開日2012-04-25
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural studies of the effect that dimethyl sulfoxide (DMSO) has on cisplatin and carboplatin binding to histidine in a protein.
Acta Crystallogr.,Sect.D, 68, 2012
3G8D
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BU of 3g8d by Molmil
Crystal structure of the biotin carboxylase subunit, E296A mutant, of acetyl-COA carboxylase from Escherichia coli
分子名称: ADENOSINE-5'-DIPHOSPHATE, Biotin carboxylase, MAGNESIUM ION, ...
著者Chou, C.Y, Yu, L.P, Tong, L.
登録日2009-02-12
公開日2009-03-03
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of biotin carboxylase in complex with substrates and implications for its catalytic mechanism.
J.Biol.Chem., 284, 2009
7R69
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BU of 7r69 by Molmil
Crystal structure of mutant R43D/C273S of L-Asparaginase I from Yersinia pestis
分子名称: 1,2-ETHANEDIOL, L-asparaginase I
著者Strzelczyk, P, Wlodawer, A, Lubkowski, J.
登録日2021-06-22
公開日2022-07-06
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The dimeric form of bacterial l-asparaginase YpAI is fully active.
Febs J., 290, 2023
5QIH
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BU of 5qih by Molmil
PanDDA analysis group deposition of models with modelled events (e.g. bound ligands) -- Crystal Structure of HAO1 in complex with Z2697514548
分子名称: 1-methylindazole-3-carboxamide, FLAVIN MONONUCLEOTIDE, Hydroxyacid oxidase 1
著者MacKinnon, S, Bezerra, G.A, Krojer, T, Bradley, A.R, Talon, R, Brandao-Neto, J, Douangamath, A, von Delft, F, Arrowsmith, C.H, Edwards, A, Bountra, C, Oppermann, U, Brennan, P.E, Yue, W.W.
登録日2018-05-22
公開日2018-07-18
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.33 Å)
主引用文献PanDDA analysis group deposition of models with modelled events (e.g. bound ligands)
To Be Published
4DHS
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BU of 4dhs by Molmil
Small-molecule inhibitors of 14-3-3 protein-protein interactions from virtual screening
分子名称: (2-{2-[(3,5-dichlorophenyl)amino]-2-oxoethoxy}phenyl)phosphonic acid, 14-3-3 PROTEIN SIGMA, CHLORIDE ION, ...
著者Thiel, P, Roeglin, L, Kohlbacher, O, Ottmann, C.
登録日2012-01-30
公開日2013-07-31
最終更新日2013-09-04
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Virtual screening and experimental validation reveal novel small-molecule inhibitors of 14-3-3 protein-protein interactions.
Chem.Commun.(Camb.), 49, 2013
2KA5
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BU of 2ka5 by Molmil
NMR Structure of the protein TM1081
分子名称: Putative anti-sigma factor antagonist TM_1081
著者Serrano, P, Geralt, M, Mohanty, B, Pedrini, B, Horst, R, Wuthrich, K, Wilson, I, Joint Center for Structural Genomics (JCSG)
登録日2008-10-30
公開日2008-11-25
最終更新日2024-05-08
実験手法SOLUTION NMR
主引用文献Comparison of NMR and crystal structures highlights conformational isomerism in protein active sites.
Acta Crystallogr.,Sect.F, 66, 2010
3GE2
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Crystal structure of putative lipoprotein SP_0198 from Streptococcus pneumoniae
分子名称: CHLORIDE ION, GLYCEROL, Lipoprotein, ...
著者Kim, Y, Zhang, R, Joachimiak, G, Gornicki, P, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2009-02-24
公開日2009-03-17
最終更新日2017-11-01
実験手法X-RAY DIFFRACTION (2.203 Å)
主引用文献Crystal Structure of Putative Lipoprotein SP_0198 from Streptococcus pneumoniae
To be Published
8B7A
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Tubulin - maytansinoid - 4 complex
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, GUANOSINE-5'-DIPHOSPHATE, ...
著者Boiarska, Z, Perez-Pena, H, Abel, A.-C, Marzullo, P, Alvarez-Bernad, B, Bonato, F, Santini, B, Horvath, D, Lucena-Agell, D, Vasile, F, Sironi, M, Diaz, F.J, Steinmetz, M.O, Prota, A.E, Piaraccini, S, Passarella, D.
登録日2022-09-29
公開日2023-08-23
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Maytansinol Functionalization: Towards Useful Probes for Studying Microtubule Dynamics.
Chemistry, 29, 2023
4DCA
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BU of 4dca by Molmil
Crystal structure of aminoglycoside phosphotransferase APH(2'')-Ib, ADP-bound
分子名称: ADENOSINE-5'-DIPHOSPHATE, Aminoglycoside phosphotransferase, MAGNESIUM ION
著者Stogios, P.J, Minasov, G, Singer, A.U, Tan, K, Nocek, B, Evdokimova, E, Egorova, O, Di Leo, R, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2012-01-17
公開日2012-02-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of aminoglycoside phosphotransferase APH(2'')-Ib, ADP-bound
TO BE PUBLISHED
3GIF
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BU of 3gif by Molmil
Crystal structure of DesKC_H188E in complex with ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, CALCIUM ION, Sensor histidine kinase desK
著者Trajtenberg, F, Albanesi, D, Alzari, P.M, Buschiazzo, A, de Mendoza, D.
登録日2009-03-05
公開日2009-09-15
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural plasticity and catalysis regulation of a thermosensor histidine kinase
Proc.Natl.Acad.Sci.USA, 106, 2009
7R0J
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BU of 7r0j by Molmil
Structure of the V2 receptor Cter-arrestin2-ScFv30 complex
分子名称: Arrestin2, ScFv30, V2R Cter
著者Bous, J, Fouillen, A, Trapani, S, Granier, S, Mouillac, B, Bron, P.
登録日2022-02-02
公開日2022-09-14
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (4.23 Å)
主引用文献Structure of the vasopressin hormone-V2 receptor-beta-arrestin1 ternary complex.
Sci Adv, 8, 2022
5QOK
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PanDDA analysis group deposition -- Crystal Structure of DCP2 (NUDT20) in complex with FMOPL000294a
分子名称: 1,2-ETHANEDIOL, 8-[(dimethylamino)methyl]-4-methyl-7-oxidanyl-chromen-2-one, ACETATE ION, ...
著者Nelson, E.R, Velupillai, S, Talon, R, Collins, P.M, Krojer, T, Wang, D, Brandao-Neto, J, Douangamath, A, Burgess-Brown, N, Arrowsmith, C.H, Bountra, C, Huber, K, von Delft, F.
登録日2019-02-22
公開日2019-05-08
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献PanDDA analysis group deposition
To Be Published
5NF1
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crystal structure of variants
分子名称: Geranylgeranylglyceryl phosphate synthase
著者Linde, M, Rajendran, C, Babinger, P, Sterner, R.
登録日2017-03-13
公開日2018-05-16
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.697 Å)
主引用文献crystal structure of variants
To Be Published
8FWZ
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Crystal structure of the Trypanosoma cruzi hypoxanthine-guanine-xanthine phosphoribosyltransferase (HGXPRT), isoform D, bound to Hydroxypropyl-Lin-ImmH Phosphonate
分子名称: Hypoxanthine-guanine phosphoribosyltransferase, PHOSPHATE ION, [(2R)-2-hydroxy-3-{[(4-oxo-4,5-dihydro-3H-pyrrolo[3,2-d]pyrimidin-7-yl)methyl]amino}propyl]phosphonic acid
著者Hughes, R, Meneely, K.M, Glockzin, K, Clinch, K, Tyler, P.C, Lamb, A.L, Meek, T.D, Katzfuss, A.
登録日2023-01-23
公開日2023-07-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Kinetic and Structural Characterization of Trypanosoma cruzi Hypoxanthine-Guanine-Xanthine Phosphoribosyltransferases and Repurposing of Transition-State Analogue Inhibitors.
Biochemistry, 62, 2023

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件を2024-10-16に公開中

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