Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 45955 件

2JW1
DownloadVisualize
BU of 2jw1 by Molmil
Structural characterization of the type III pilotin-secretin interaction in Shigella flexneri by NMR spectroscopy
分子名称: Lipoprotein mxiM, Outer membrane protein mxiD
著者Okon, M.S, Lario, P.I, Creagh, L, Jung, Y.M.T, Maurelli, A.T, Strynadka, N.C.J, McIntosh, L.P.
登録日2007-10-02
公開日2008-09-02
最終更新日2020-02-19
実験手法SOLUTION NMR
主引用文献Structural Characterization of the Type-III Pilot-Secretin Complex from Shigella flexneri
Structure, 16, 2008
1N0S
DownloadVisualize
BU of 1n0s by Molmil
ENGINEERED LIPOCALIN FLUA IN COMPLEX WITH FLUORESCEIN
分子名称: 2-(6-HYDROXY-3-OXO-3H-XANTHEN-9-YL)-BENZOIC ACID, Bilin-binding protein, SULFATE ION
著者Korndoerfer, I.P, Skerra, A.
登録日2002-10-15
公開日2003-08-05
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystallographic analysis of an "anticalin" with tailored specificity for fluorescein reveals high structural plasticity of the lipocalin loop region.
Proteins, 53, 2003
1NKH
DownloadVisualize
BU of 1nkh by Molmil
Crystal structure of Lactose synthase complex with UDP and Manganese
分子名称: ALPHA-LACTALBUMIN, BETA-1,4-GALACTOSYLTRANSFERASE, CALCIUM ION, ...
著者Ramakrishnan, B, Qasba, P.K.
登録日2003-01-03
公開日2003-01-14
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of lactose synthase reveals a large conformational change in its catalytic component, the beta-1,4-galactosyltransferase
J.Mol.Biol., 310, 2001
3HT9
DownloadVisualize
BU of 3ht9 by Molmil
2-methoxyphenol in complex with T4 lysozyme L99A/M102Q
分子名称: BETA-MERCAPTOETHANOL, Guaiacol, Lysozyme, ...
著者Boyce, S.E, Mobley, D.L, Rocklin, G.J, Graves, A.P, Dill, K.A, Shoichet, B.K.
登録日2009-06-11
公開日2009-11-03
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献Predicting ligand binding affinity with alchemical free energy methods in a polar model binding site.
J.Mol.Biol., 394, 2009
4IRL
DownloadVisualize
BU of 4irl by Molmil
X-ray structure of the CARD domain of zebrafish GBP-NLRP1 like protein
分子名称: 1,2-ETHANEDIOL, ACETATE ION, DI(HYDROXYETHYL)ETHER, ...
著者Jin, T, Huang, M, Smith, P, Xiao, T.
登録日2013-01-15
公開日2013-08-07
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Structure of the caspase-recruitment domain from a zebrafish guanylate-binding protein.
Acta Crystallogr.,Sect.F, 69, 2013
7BEX
DownloadVisualize
BU of 7bex by Molmil
Glyceraldehyde 3-phosphate dehydrogenase from Campylobacter jejeuni - ADP complex
分子名称: ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, BETA-MERCAPTOETHANOL, ...
著者Moody, P.C.E, Ayna, A.
登録日2020-12-29
公開日2022-01-12
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.054 Å)
主引用文献structure of Camplylobacter jejueni GAPDH in complex with ADP
To Be Published
3HU9
DownloadVisualize
BU of 3hu9 by Molmil
Nitrosobenzene in complex with T4 lysozyme L99A/M102Q
分子名称: Lysozyme, NITROSOBENZENE, PHOSPHATE ION
著者Boyce, S.E, Mobley, D.L, Rocklin, G.J, Graves, A.P, Dill, K.A, Shoichet, B.K.
登録日2009-06-13
公開日2009-11-03
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.46 Å)
主引用文献Predicting ligand binding affinity with alchemical free energy methods in a polar model binding site.
J.Mol.Biol., 394, 2009
7LTB
DownloadVisualize
BU of 7ltb by Molmil
Crystal Structure of Keratinicyclin B
分子名称: (2~{S},4~{S},5~{R},6~{S})-4-azanyl-5-methoxy-6-methyl-oxan-2-ol, 3-ammonio-2,3,6-trideoxy-alpha-L-arabino-hexopyranose-(1-2)-beta-D-glucopyranose, FORMIC ACID, ...
著者Davis, K.M, Jeffrey, P.D, Seyedsayamdost, M.R.
登録日2021-02-19
公開日2022-12-07
最終更新日2024-07-24
実験手法X-RAY DIFFRACTION (0.95 Å)
主引用文献Potent and specific antibiotic combination therapy against Clostridioides difficile.
Nat.Chem.Biol., 20, 2024
7WXM
DownloadVisualize
BU of 7wxm by Molmil
Crystal Structure of PL-5 family polysaccharide lyase PanPL from Pandoraea apista at pH6.5 in apo form
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, poly(beta-D-mannuronate) lyase
著者Dash, P, Acharya, R.
登録日2022-02-15
公開日2022-08-10
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.23 Å)
主引用文献Distinct Modes of Hidden Structural Dynamics in the Functioning of an Allosteric Polysaccharide Lyase.
Acs Cent.Sci., 8, 2022
7LKC
DownloadVisualize
BU of 7lkc by Molmil
Crystal Structure of Keratinimicin A
分子名称: (2~{S},4~{S},5~{R},6~{S})-4-azanyl-5-methoxy-6-methyl-oxan-2-ol, CHLORIDE ION, FORMIC ACID, ...
著者Davis, K.M, Jeffrey, P.D, Seyedsayamdost, M.R.
登録日2021-02-02
公開日2022-12-07
最終更新日2024-07-24
実験手法X-RAY DIFFRACTION (0.95 Å)
主引用文献Potent and specific antibiotic combination therapy against Clostridioides difficile.
Nat.Chem.Biol., 20, 2024
7WXN
DownloadVisualize
BU of 7wxn by Molmil
Crystal Structure of PL-5 family polysaccharide lyase PanPL from Pandoraea apista at pH7.5 in apo form
分子名称: poly(beta-D-mannuronate) lyase
著者Dash, P, Acharya, R.
登録日2022-02-15
公開日2022-08-10
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Distinct Modes of Hidden Structural Dynamics in the Functioning of an Allosteric Polysaccharide Lyase.
Acs Cent.Sci., 8, 2022
4ITK
DownloadVisualize
BU of 4itk by Molmil
The structure of C.reinhardtii Ferredoxin 2
分子名称: Apoferredoxin, FE2/S2 (INORGANIC) CLUSTER, GLYCEROL
著者Alahuhta, P.M, Lunin, V.V.
登録日2013-01-18
公開日2014-01-29
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.18 Å)
主引用文献Crystal structure and biochemical characterization of Chlamydomonas FDX2 reveal two residues that, when mutated, partially confer FDX2 the redox potential and catalytic properties of FDX1.
Photosyn. Res., 128, 2016
7WXR
DownloadVisualize
BU of 7wxr by Molmil
Crystal Structure of PL-5 family polysaccharide lyase PanPL-N171L mutant from Pandoraea apista in apo form
分子名称: poly(beta-D-mannuronate) lyase
著者Dash, P, Acharya, R.
登録日2022-02-15
公開日2022-08-10
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Distinct Modes of Hidden Structural Dynamics in the Functioning of an Allosteric Polysaccharide Lyase.
Acs Cent.Sci., 8, 2022
5JQJ
DownloadVisualize
BU of 5jqj by Molmil
Directed evolutionary changes in MBL super family - NDM-1 Round 10 crystal-1
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, MAGNESIUM ION, Metallo-beta-lactamase type 2, ...
著者Hong, N.-S, Jackson, C.J, Carr, P.D.
登録日2016-05-05
公開日2017-05-10
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献Enzyme evolvability is contingent on the initial sequence background
To Be Published
2NZJ
DownloadVisualize
BU of 2nzj by Molmil
The crystal structure of REM1 in complex with GDP
分子名称: CHLORIDE ION, GTP-binding protein REM 1, GUANOSINE-5'-DIPHOSPHATE, ...
著者Turnbull, A.P, Papagrigoriou, E, Ugochukwu, E, Elkins, J.M, Soundararajan, M, Yang, X, Gorrec, F, Umeano, C, Salah, E, Burgess, N, Johansson, C, Berridge, G, Gileadi, O, Bray, J, Marsden, B, Watts, S, von Delft, F, Weigelt, J, Edwards, A, Arrowsmith, C.H, Sundstrom, M, Doyle, D, Structural Genomics Consortium (SGC)
登録日2006-11-23
公開日2006-12-12
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The crystal structure of REM1 in complex with GDP
To be Published
7WXP
DownloadVisualize
BU of 7wxp by Molmil
Crystal Structure of PL-5 family polysaccharide lyase PanPL-H172A mutant from Pandoraea apista in ManA bound form
分子名称: beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid, poly(beta-D-mannuronate) lyase
著者Dash, P, Acharya, R.
登録日2022-02-15
公開日2022-08-10
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Distinct Modes of Hidden Structural Dynamics in the Functioning of an Allosteric Polysaccharide Lyase.
Acs Cent.Sci., 8, 2022
2NXY
DownloadVisualize
BU of 2nxy by Molmil
HIV-1 gp120 Envelope Glycoprotein(S334A) Complexed with CD4 and Antibody 17b
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ANTIBODY 17B, ...
著者Zhou, T, Xu, L, Dey, B, Hessell, A.J, Van Ryk, D, Xiang, S.H, Yang, X, Zhang, M.Y, Zwick, M.B, Arthos, J, Burton, D.R, Dimitrov, D.S, Sodroski, J, Wyatt, R, Nabel, G.J, Kwong, P.D.
登録日2006-11-20
公開日2007-02-06
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural definition of a conserved neutralization epitope on HIV-1 gp120.
Nature, 445, 2007
7WXL
DownloadVisualize
BU of 7wxl by Molmil
Crystal Structure of PL-5 family polysaccharide lyase PanPL from Pandoraea apista at pH5.5 in apo form
分子名称: CHLORIDE ION, poly(beta-D-mannuronate) lyase
著者Dash, P, Acharya, R.
登録日2022-02-15
公開日2022-08-10
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Distinct Modes of Hidden Structural Dynamics in the Functioning of an Allosteric Polysaccharide Lyase.
Acs Cent.Sci., 8, 2022
7WXO
DownloadVisualize
BU of 7wxo by Molmil
Crystal Structure of PL-5 family polysaccharide lyase PanPL from Pandoraea apista at pH8.5 in apo form
分子名称: poly(beta-D-mannuronate) lyase
著者Dash, P, Acharya, R.
登録日2022-02-15
公開日2022-08-10
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Distinct Modes of Hidden Structural Dynamics in the Functioning of an Allosteric Polysaccharide Lyase.
Acs Cent.Sci., 8, 2022
3R9M
DownloadVisualize
BU of 3r9m by Molmil
Crystal structure of the Brox Bro1 domain
分子名称: 1,2-ETHANEDIOL, BRO1 domain-containing protein BROX, FORMIC ACID
著者Mu, R.L, Jiang, J.S, Snyder, G, Smith, P, Xiao, T.
登録日2011-03-25
公開日2011-09-14
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献The Phe105 Loop of Alix Bro1 Domain Plays a Key Role in HIV-1 Release.
Structure, 19, 2011
2O0B
DownloadVisualize
BU of 2o0b by Molmil
Mycobacterium tuberculosis epsp synthase in complex with S3P (partially photolyzed)
分子名称: 3-phosphoshikimate 1-carboxyvinyltransferase, PHOSPHATE ION, SHIKIMATE-3-PHOSPHATE, ...
著者Burenkov, G.P, Kachalova, G.S, Bartunik, H.D, Mycobacterium Tuberculosis Structural Proteomics Project (XMTB)
登録日2006-11-27
公開日2008-04-08
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Complex of 3-PHOSPHOSHIKIMATE 1-CARBOXYVINYLTRANSFERASE with S3P
To be Published
1YY2
DownloadVisualize
BU of 1yy2 by Molmil
NMR Conformational Analysis of LHRH and its analogues
分子名称: Leuprolide
著者Spyroulias, G.A, Zompra, A, Magafa, V, Cordopatis, P.
登録日2005-02-23
公開日2006-02-21
最終更新日2023-03-01
実験手法SOLUTION NMR
主引用文献NMR Conformational Analysis of LHRH and its analogues
To be Published
5NEL
DownloadVisualize
BU of 5nel by Molmil
Crystal structure of the polysaccharide deacetylase Bc1974 from Bacillus cereus in complex with ThiametG
分子名称: (3AR,5R,6S,7R,7AR)-2-(ETHYLAMINO)-5-(HYDROXYMETHYL)-5,6,7,7A-TETRAHYDRO-3AH-PYRANO[3,2-D][1,3]THIAZOLE-6,7-DIOL, 1,2-ETHANEDIOL, ACETATE ION, ...
著者Andreou, A, Giastas, P, Eliopoulos, E.E.
登録日2017-03-10
公開日2018-02-21
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.734 Å)
主引用文献Structures of the Peptidoglycan N-Acetylglucosamine Deacetylase Bc1974 and Its Complexes with Zinc Metalloenzyme Inhibitors.
Biochemistry, 57, 2018
1KKW
DownloadVisualize
BU of 1kkw by Molmil
NMR Solution Structure of d(CCATGCGTGG)2, G-T mismatch structure
分子名称: 5'-D(*CP*CP*AP*TP*GP*CP*GP*TP*GP*G)-3'
著者Isaacs, R.J, Spielmann, H.P.
登録日2001-12-10
公開日2002-06-19
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structural differences in the NOE-derived structure of G-T mismatched DNA relative to normal DNA are correlated with differences in (13)C relaxation-based internal dynamics.
J.Mol.Biol., 319, 2002
4J2P
DownloadVisualize
BU of 4j2p by Molmil
Crystal structure of LuxF from Photobacterium leiognathi
分子名称: Non-fluorescent flavoprotein
著者Winkler, A, Macheroux, P, Gruber, K.
登録日2013-02-05
公開日2014-02-05
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural and biochemical properties of LuxF from Photobacterium leiognathi.
Biochim. Biophys. Acta, 1854, 2015

224004

件を2024-08-21に公開中

PDB statisticsPDBj update infoContact PDBjnumon