3VSS
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![BU of 3vss by Molmil](/molmil-images/mine/3vss) | Microbacterium saccharophilum K-1 beta-fructofuranosidase catalytic domain complexed with fructose | Descriptor: | Beta-fructofuranosidase, beta-D-fructofuranose | Authors: | Tonozuka, T, Tamaki, A, Yokoi, G, Miyazaki, T, Ichikawa, M, Nishikawa, A, Ohta, Y, Hidaka, Y, Katayama, K, Hatada, Y, Ito, T, Fujita, K. | Deposit date: | 2012-05-08 | Release date: | 2012-08-22 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.97 Å) | Cite: | Crystal structure of a lactosucrose-producing enzyme, Arthrobacter sp. K-1 beta-fructofuranosidase Enzyme.Microb.Technol., 51, 2012
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3VSR
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![BU of 3vsr by Molmil](/molmil-images/mine/3vsr) | Microbacterium saccharophilum K-1 beta-fructofuranosidase catalytic domain | Descriptor: | Beta-fructofuranosidase | Authors: | Tonozuka, T, Tamaki, A, Yokoi, G, Miyazaki, T, Ichikawa, M, Nishikawa, A, Ohta, Y, Hidaka, Y, Katayama, K, Hatada, Y, Ito, T, Fujita, K. | Deposit date: | 2012-05-08 | Release date: | 2012-08-22 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Crystal structure of a lactosucrose-producing enzyme, Arthrobacter sp. K-1 beta-fructofuranosidase Enzyme.Microb.Technol., 51, 2012
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8I2Q
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![BU of 8i2q by Molmil](/molmil-images/mine/8i2q) | Beijerinckia indica beta-fructosyltransferase variant H395R/F473Y | Descriptor: | Beta-fructosyltransferase, GLYCEROL | Authors: | Tonozuka, T. | Deposit date: | 2023-01-15 | Release date: | 2023-06-14 | Last modified: | 2023-09-06 | Method: | X-RAY DIFFRACTION (2.15 Å) | Cite: | Characterization and alteration of product specificity of Beijerinckia indica subsp. indica beta-fructosyltransferase. Biosci.Biotechnol.Biochem., 87, 2023
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8I2R
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8ZHA
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![BU of 8zha by Molmil](/molmil-images/mine/8zha) | HIV-1 integrase core domain in complex with compound 15 | Descriptor: | (2~{S})-2-[7-(cycloheptylcarbamoyl)-4',5-dimethyl-spiro[1,2-dihydroindene-3,1'-cyclohexane]-4-yl]-2-[(2-methylpropan-2-yl)oxy]ethanoic acid, Integrase, SULFATE ION, ... | Authors: | Furuzono, T, Orita, T, Nomura, A, Adachi, T. | Deposit date: | 2024-05-10 | Release date: | 2024-07-10 | Method: | X-RAY DIFFRACTION (1.95 Å) | Cite: | Design and synthesis of novel and potent allosteric HIV-1 integrase inhibitors with a spirocyclic moiety. Bioorg.Med.Chem.Lett., 2024
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8ZH4
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![BU of 8zh4 by Molmil](/molmil-images/mine/8zh4) | HIV-1 integrase core domain in complex with compound 5 | Descriptor: | (2~{S})-2-(4',5-dimethylspiro[1,2-dihydroindene-3,1'-cyclohexane]-4-yl)-2-[(2-methylpropan-2-yl)oxy]ethanoic acid, Integrase, SULFATE ION, ... | Authors: | Furuzono, T, Orita, T, Nomura, A, Adachi, T. | Deposit date: | 2024-05-10 | Release date: | 2024-07-10 | Method: | X-RAY DIFFRACTION (1.82 Å) | Cite: | Design and synthesis of novel and potent allosteric HIV-1 integrase inhibitors with a spirocyclic moiety. Bioorg.Med.Chem.Lett., 2024
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8XXA
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8XX9
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![BU of 8xx9 by Molmil](/molmil-images/mine/8xx9) | Rhodothermus marinus alpha-amylase RmGH13_47A CBM48-A-B-C domains | Descriptor: | (4S)-2-METHYL-2,4-PENTANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ... | Authors: | Tonozuka, T. | Deposit date: | 2024-01-18 | Release date: | 2024-02-07 | Last modified: | 2024-07-17 | Method: | X-RAY DIFFRACTION (1.55 Å) | Cite: | Structural basis for the recognition of alpha-1,6-branched alpha-glucan by GH13_47 alpha-amylase from Rhodothermus marinus. Proteins, 92, 2024
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6M0D
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![BU of 6m0d by Molmil](/molmil-images/mine/6m0d) | Beijerinckia indica beta-fructosyltransferase | Descriptor: | Levansucrase, MAGNESIUM ION | Authors: | Tonozuka, T. | Deposit date: | 2020-02-21 | Release date: | 2020-08-12 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Crystal structure of a glycoside hydrolase family 68 beta-fructosyltransferase from Beijerinckia indica subsp. indica in complex with fructose. Biosci.Biotechnol.Biochem., 84, 2020
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6M0E
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![BU of 6m0e by Molmil](/molmil-images/mine/6m0e) | Beijerinckia indica beta-fructosyltransferase complexed with fructose | Descriptor: | Levansucrase, MAGNESIUM ION, beta-D-fructofuranose, ... | Authors: | Tonozuka, T. | Deposit date: | 2020-02-21 | Release date: | 2020-08-12 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (1.35 Å) | Cite: | Crystal structure of a glycoside hydrolase family 68 beta-fructosyltransferase from Beijerinckia indica subsp. indica in complex with fructose. Biosci.Biotechnol.Biochem., 84, 2020
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5B6T
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![BU of 5b6t by Molmil](/molmil-images/mine/5b6t) | Catalytic domain of Coprinopsis cinerea GH62 alpha-L-arabinofuranosidase complexed with Pb | Descriptor: | CALCIUM ION, GLYCEROL, Glycosyl hydrolase family 62 protein, ... | Authors: | Tonozuka, T. | Deposit date: | 2016-06-01 | Release date: | 2016-09-07 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.48 Å) | Cite: | Structure of the Catalytic Domain of alpha-L-Arabinofuranosidase from Coprinopsis cinerea, CcAbf62A, Provides Insights into Structure-Function Relationships in Glycoside Hydrolase Family 62 Appl. Biochem. Biotechnol., 181, 2017
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5AWO
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![BU of 5awo by Molmil](/molmil-images/mine/5awo) | Arthrobacter globiformis T6 isomalto-dextranse | Descriptor: | ACETATE ION, Isomaltodextranase, PHOSPHATE ION | Authors: | Tonozuka, T. | Deposit date: | 2015-07-08 | Release date: | 2015-09-09 | Last modified: | 2020-02-26 | Method: | X-RAY DIFFRACTION (1.44 Å) | Cite: | Crystal Structure and Mutational Analysis of Isomalto-dextranase, a Member of Glycoside Hydrolase Family 27 J.Biol.Chem., 290, 2015
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5AWP
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5B6S
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![BU of 5b6s by Molmil](/molmil-images/mine/5b6s) | Catalytic domain of Coprinopsis cinerea GH62 alpha-L-arabinofuranosidase | Descriptor: | CALCIUM ION, GLYCEROL, Glycosyl hydrolase family 62 protein | Authors: | Tonozuka, T. | Deposit date: | 2016-06-01 | Release date: | 2016-09-07 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | Structure of the Catalytic Domain of alpha-L-Arabinofuranosidase from Coprinopsis cinerea, CcAbf62A, Provides Insights into Structure-Function Relationships in Glycoside Hydrolase Family 62 Appl. Biochem. Biotechnol., 181, 2017
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5AWQ
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![BU of 5awq by Molmil](/molmil-images/mine/5awq) | Arthrobacter globiformis T6 isomalto-dextranse complexed with panose | Descriptor: | Isomaltodextranase, PHOSPHATE ION, alpha-D-glucopyranose-(1-6)-alpha-D-glucopyranose, ... | Authors: | Tonozuka, T. | Deposit date: | 2015-07-08 | Release date: | 2015-09-09 | Last modified: | 2020-07-29 | Method: | X-RAY DIFFRACTION (1.48 Å) | Cite: | Crystal Structure and Mutational Analysis of Isomalto-dextranase, a Member of Glycoside Hydrolase Family 27 J.Biol.Chem., 290, 2015
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4YSH
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4YJK
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![BU of 4yjk by Molmil](/molmil-images/mine/4yjk) | Crystal structure of C212S mutant of Shewanella oneidensis MR-1 uridine phosphorylase | Descriptor: | SULFATE ION, URACIL, Uridine phosphorylase | Authors: | Safonova, T.N, Mordkovich, N.N, Manuvera, V.A, Dorovatovsky, P.V, Veiko, V.P, Popov, V.O, Polyakov, K.M. | Deposit date: | 2015-03-03 | Release date: | 2015-03-11 | Last modified: | 2024-01-10 | Method: | X-RAY DIFFRACTION (1.68 Å) | Cite: | Concerted action of two subunits of the functional dimer of Shewanella oneidensis MR-1 uridine phosphorylase derived from a comparison of the C212S mutant and the wild-type enzyme. Acta Crystallogr D Struct Biol, 72, 2016
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7VCP
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![BU of 7vcp by Molmil](/molmil-images/mine/7vcp) | Frischella perrara beta-fructofuranosidase in complex with fructose | Descriptor: | DI(HYDROXYETHYL)ETHER, PENTAETHYLENE GLYCOL, Sucrose-6-phosphate hydrolase, ... | Authors: | Tonozuka, T. | Deposit date: | 2021-09-03 | Release date: | 2022-03-09 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Enzymatic and structural characterization of beta-fructofuranosidase from the honeybee gut bacterium Frischella perrara. Appl.Microbiol.Biotechnol., 106, 2022
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7VCO
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![BU of 7vco by Molmil](/molmil-images/mine/7vco) | Frischella perrara beta-fructofuranosidase | Descriptor: | DI(HYDROXYETHYL)ETHER, Sucrose-6-phosphate hydrolase, TRIETHYLENE GLYCOL | Authors: | Tonozuka, T. | Deposit date: | 2021-09-03 | Release date: | 2022-03-09 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | Enzymatic and structural characterization of beta-fructofuranosidase from the honeybee gut bacterium Frischella perrara. Appl.Microbiol.Biotechnol., 106, 2022
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4R2W
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![BU of 4r2w by Molmil](/molmil-images/mine/4r2w) | X-ray structure of uridine phosphorylase from Shewanella oneidensis MR-1 in complex with uridine at 1.6 A resolution | Descriptor: | GLYCEROL, SULFATE ION, URIDINE, ... | Authors: | Safonova, T.N, Mordkovich, N.N, Manuvera, V.A, Veiko, V.P, Popov, V.O, Polyakov, K.P. | Deposit date: | 2014-08-13 | Release date: | 2014-12-10 | Last modified: | 2023-09-20 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | High-syn conformation of uridine and asymmetry of the hexameric molecule revealed in the high-resolution structures of Shewanella oneidensis MR-1 uridine phosphorylase in the free form and in complex with uridine. Acta Crystallogr.,Sect.D, 70, 2014
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4R2X
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![BU of 4r2x by Molmil](/molmil-images/mine/4r2x) | Unique conformation of uridine and asymmetry of the hexameric molecule revealed in the high-resolution structures of Shewanella oneidensis uridine phosphorylase in the free form and in complex with uridine | Descriptor: | CHLORIDE ION, GLYCEROL, SULFATE ION, ... | Authors: | Safonova, T.N, Mordkovich, N.N, Manuvera, V.A, Veiko, V.P, Popov, V.O, Polyakov, K.M. | Deposit date: | 2014-08-13 | Release date: | 2014-12-10 | Last modified: | 2023-09-20 | Method: | X-RAY DIFFRACTION (0.93 Å) | Cite: | High-syn conformation of uridine and asymmetry of the hexameric molecule revealed in the high-resolution structures of Shewanella oneidensis MR-1 uridine phosphorylase in the free form and in complex with uridine. Acta Crystallogr.,Sect.D, 70, 2014
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6JR6
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![BU of 6jr6 by Molmil](/molmil-images/mine/6jr6) | Flavobacterium johnsoniae GH31 dextranase, FjDex31A | Descriptor: | (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, Candidate alpha-glycosidase Glycoside hydrolase family 31 | Authors: | Tonozuka, T. | Deposit date: | 2019-04-02 | Release date: | 2019-04-24 | Last modified: | 2020-04-01 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Structural insights into polysaccharide recognition by Flavobacterium johnsoniae dextranase, a member of glycoside hydrolase family 31. Febs J., 287, 2020
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6JR8
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![BU of 6jr8 by Molmil](/molmil-images/mine/6jr8) | Flavobacterium johnsoniae GH31 dextranase, FjDex31A, mutant D412A complexed with isomaltotriose | Descriptor: | (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, Candidate alpha-glycosidase Glycoside hydrolase family 31, ... | Authors: | Tonozuka, T. | Deposit date: | 2019-04-02 | Release date: | 2019-04-24 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Structural insights into polysaccharide recognition by Flavobacterium johnsoniae dextranase, a member of glycoside hydrolase family 31. Febs J., 287, 2020
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7XOI
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![BU of 7xoi by Molmil](/molmil-images/mine/7xoi) | Aspergillus sojae alpha-glucosidase AsojAgdL in complex with trehalose | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, SODIUM ION, ... | Authors: | Tonozuka, T. | Deposit date: | 2022-05-01 | Release date: | 2022-06-15 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Structural basis for proteolytic processing of Aspergillus sojae alpha-glucosidase L with strong transglucosylation activity. J.Struct.Biol., 214, 2022
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6JR7
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![BU of 6jr7 by Molmil](/molmil-images/mine/6jr7) | Flavobacterium johnsoniae GH31 dextranase, FjDex31A, complexed with glucose | Descriptor: | (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, Candidate alpha-glycosidase Glycoside hydrolase family 31, ... | Authors: | Tonozuka, T. | Deposit date: | 2019-04-02 | Release date: | 2019-04-24 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (1.75 Å) | Cite: | Structural insights into polysaccharide recognition by Flavobacterium johnsoniae dextranase, a member of glycoside hydrolase family 31. Febs J., 287, 2020
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