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PDB: 191 results

3AUU
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Crystal structure of Bacillus megaterium glucose dehydrogenase 4 in complex with D-glucose
Descriptor: Glucose 1-dehydrogenase 4, beta-D-glucopyranose
Authors:Nishioka, T, Yasutake, Y, Nishiya, Y, Tamura, T.
Deposit date:2011-02-16
Release date:2012-02-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure-guided mutagenesis for the improvement of substrate specificity of Bacillus megaterium glucose 1-dehydrogenase IV
Febs J., 279, 2012
3AUT
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Crystal structure of Bacillus megaterium glucose dehydrogenase 4 in complex with NADH
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Glucose 1-dehydrogenase 4
Authors:Nishioka, T, Yasutake, Y, Nishiya, Y, Tamura, T.
Deposit date:2011-02-16
Release date:2012-02-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure-guided mutagenesis for the improvement of substrate specificity of Bacillus megaterium glucose 1-dehydrogenase IV
Febs J., 279, 2012
3AUS
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Crystal structure of Bacillus megaterium glucose dehydrogenase 4 in ligand-free form
Descriptor: Glucose 1-dehydrogenase 4
Authors:Nishioka, T, Yasutake, Y, Nishiya, Y, Tamura, T.
Deposit date:2011-02-16
Release date:2012-02-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure-guided mutagenesis for the improvement of substrate specificity of Bacillus megaterium glucose 1-dehydrogenase IV
Febs J., 279, 2012
3AY6
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Crystal structure of Bacillus megaterium glucose dehydrogenase 4 A258F mutant in complex with NADH and D-glucose
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, CHLORIDE ION, Glucose 1-dehydrogenase 4, ...
Authors:Nishioka, T, Yasutake, Y, Nishiya, Y, Tamura, T.
Deposit date:2011-04-29
Release date:2012-05-23
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure-guided mutagenesis for the improvement of substrate specificity of Bacillus megaterium glucose 1-dehydrogenase IV
Febs J., 279, 2012
3AY7
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Crystal structure of Bacillus megaterium glucose dehydrogenase 4 G259A mutant
Descriptor: CHLORIDE ION, Glucose 1-dehydrogenase 4
Authors:Nishioka, T, Yasutake, Y, Nishiya, Y, Tamura, T.
Deposit date:2011-04-29
Release date:2012-05-23
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure-guided mutagenesis for the improvement of substrate specificity of Bacillus megaterium glucose 1-dehydrogenase IV
Febs J., 279, 2012
2ZK7
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Structure of a C-terminal deletion mutant of Thermoplasma acidophilum aldohexose dehydrogenase (AldT)
Descriptor: Glucose 1-dehydrogenase related protein
Authors:Nishioka, T, Yasutake, Y, Nishiya, Y, Tamura, N, Tamura, T.
Deposit date:2008-03-12
Release date:2009-01-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:C-terminal tail derived from the neighboring subunit is critical for the activity of Thermoplasma acidophilum D-aldohexose dehydrogenase
Proteins, 74, 2009
3X3Z
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Copper amine oxidase from Arthrobacter globiformis: Aminoresorcinol form produced by anaerobic reduction with ethylamine hydrochloride
Descriptor: CHLORIDE ION, COPPER (II) ION, GLYCEROL, ...
Authors:Okajima, T, Nakanishi, S, Murakawa, T, Kataoka, M, Hayashi, H, Hamaguchi, A, Nakai, T, Kawano, Y, Yamaguchi, H, Tanizawa, K.
Deposit date:2015-03-10
Release date:2015-08-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Probing the Catalytic Mechanism of Copper Amine Oxidase from Arthrobacter globiformis with Halide Ions.
J.Biol.Chem., 290, 2015
3X40
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Copper amine oxidase from Arthrobacter globiformis: Product Schiff-base form produced by anaerobic reduction in the presence of sodium chloride
Descriptor: CHLORIDE ION, COPPER (II) ION, GLYCEROL, ...
Authors:Okajima, T, Nakanishi, S, Murakawa, T, Kataoka, M, Hayashi, H, Hamaguchi, A, Nakai, T, Kawano, Y, Yamaguchi, H, Tanizawa, K.
Deposit date:2015-03-10
Release date:2015-08-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Probing the Catalytic Mechanism of Copper Amine Oxidase from Arthrobacter globiformis with Halide Ions.
J.Biol.Chem., 290, 2015
3X42
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Crystal structure of copper amine oxidase from Arthrobacter globiformis in the presence of sodium bromide
Descriptor: BROMIDE ION, COPPER (II) ION, GLYCEROL, ...
Authors:Okajima, T, Nakanishi, S, Murakawa, T, Kataoka, M, Hayashi, H, Hamaguchi, A, Nakai, T, Kawano, Y, Yamaguchi, H, Tanizawa, K.
Deposit date:2015-03-10
Release date:2015-08-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.875 Å)
Cite:Probing the Catalytic Mechanism of Copper Amine Oxidase from Arthrobacter globiformis with Halide Ions.
J.Biol.Chem., 290, 2015
3X41
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Copper amine oxidase from Arthrobacter globiformis: Product Schiff-base form produced by anaerobic reduction in the presence of sodium bromide
Descriptor: BROMIDE ION, COPPER (II) ION, GLYCEROL, ...
Authors:Okajima, T, Nakanishi, S, Murakawa, T, Kataoka, M, Hayashi, H, Hamaguchi, A, Nakai, T, Kawano, Y, Yamaguchi, H, Tanizawa, K.
Deposit date:2015-03-10
Release date:2015-08-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Probing the Catalytic Mechanism of Copper Amine Oxidase from Arthrobacter globiformis with Halide Ions.
J.Biol.Chem., 290, 2015
3X3X
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Copper amine oxidase from Arthrobacter globiformis anaerobically reduced by phenylethylamine
Descriptor: 2-PHENYL-ETHANOL, COPPER (II) ION, GLYCEROL, ...
Authors:Okajima, T, Nakanishi, S, Murakawa, T, Kataoka, M, Hayashi, H, Hamaguchi, A, Nakai, T, Kawano, Y, Yamaguchi, H, Tanizawa, K.
Deposit date:2015-03-10
Release date:2015-08-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Probing the Catalytic Mechanism of Copper Amine Oxidase from Arthrobacter globiformis with Halide Ions.
J.Biol.Chem., 290, 2015
3X3Y
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Copper amine oxidase from Arthrobacter globiformis anaerobically reduced by histamine
Descriptor: COPPER (II) ION, GLYCEROL, POTASSIUM ION, ...
Authors:Okajima, T, Nakanishi, S, Murakawa, T, Kataoka, M, Hayashi, H, Hamaguchi, A, Nakai, T, Kawano, Y, Yamaguchi, H, Tanizawa, K.
Deposit date:2015-03-10
Release date:2015-08-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.499 Å)
Cite:Probing the Catalytic Mechanism of Copper Amine Oxidase from Arthrobacter globiformis with Halide Ions.
J.Biol.Chem., 290, 2015
2E0Y
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Crystal structure of the samarium derivative of mature gamma-glutamyltranspeptidase from Escherichia coli
Descriptor: GLYCEROL, Gamma-glutamyltranspeptidase, SAMARIUM (III) ION
Authors:Okada, T, Wada, K, Fukuyama, K.
Deposit date:2006-10-16
Release date:2006-11-28
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Crystal structure of the gamma-glutamyltranspeptidase precursor protein from Escherichia coli. Structural changes upon autocatalytic processing and implications for the maturation mechanism
J.Biol.Chem., 282, 2007
2E0X
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Crystal Structure of Gamma-glutamyltranspeptidase from Escherichia coli (monoclinic form)
Descriptor: CALCIUM ION, Gamma-glutamyltranspeptidase
Authors:Okada, T, Wada, K, Fukuyama, K.
Deposit date:2006-10-16
Release date:2006-11-28
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of the gamma-glutamyltranspeptidase precursor protein from Escherichia coli. Structural changes upon autocatalytic processing and implications for the maturation mechanism
J.Biol.Chem., 282, 2007
2E0W
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T391A precursor mutant protein of gamma-Glutamyltranspeptidase from Escherichia coli
Descriptor: Gamma-glutamyltranspeptidase
Authors:Okada, T, Wada, K, Fukuyama, K.
Deposit date:2006-10-16
Release date:2006-11-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal structure of the gamma-glutamyltranspeptidase precursor protein from Escherichia coli. Structural changes upon autocatalytic processing and implications for the maturation mechanism
J.Biol.Chem., 282, 2007
2ZXJ
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Crystal structure of YycF DNA-binding domain from Staphylococcus aureus
Descriptor: Transcriptional regulatory protein walR
Authors:Okajima, T, Doi, A, Utsumi, R.
Deposit date:2008-12-26
Release date:2009-01-20
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Novel Antibiotics Target Protein of Gram-positive Pathogens: X-ray Crystal Structures and Search of Potential Drug-Binding Sites
To be Published
2DBW
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BU of 2dbw by Molmil
Crystal Structure of Gamma-glutamyltranspeptidase from Escherichia coli Acyl-Enzyme Intermediate
Descriptor: GAMMA-L-GLUTAMIC ACID, GLYCEROL, Gamma-glutamyltranspeptidase
Authors:Okada, T, Wada, K, Fukuyama, K.
Deposit date:2005-12-16
Release date:2006-04-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of gamma-glutamyltranspeptidase from Escherichia coli, a key enzyme in glutathione metabolism, and its reaction intermediate
Proc.Natl.Acad.Sci.USA, 103, 2006
2DBX
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BU of 2dbx by Molmil
Crystal Structure of Gamma-glutamyltranspeptidase from Escherichia coli Complexed with L-Glutamate
Descriptor: CALCIUM ION, GLUTAMIC ACID, GLYCEROL, ...
Authors:Okada, T, Wada, K, Fukuyama, K.
Deposit date:2005-12-16
Release date:2006-04-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structures of gamma-glutamyltranspeptidase from Escherichia coli, a key enzyme in glutathione metabolism, and its reaction intermediate.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2DBU
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BU of 2dbu by Molmil
Crystal Structure of Gamma-glutamyltranspeptidase from Escherichia coli
Descriptor: Gamma-glutamyltranspeptidase
Authors:Okada, T, Wada, K, Fukuyama, K.
Deposit date:2005-12-16
Release date:2006-04-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structures of gamma-glutamyltranspeptidase from Escherichia coli, a key enzyme in glutathione metabolism, and its reaction intermediate.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2DG5
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BU of 2dg5 by Molmil
Crystal Structure of Gamma-glutamyl transpeptidase from Escherichia coli in complex with hydrolyzed Glutathione
Descriptor: CALCIUM ION, GLUTAMIC ACID, GLYCEROL, ...
Authors:Okada, T, Wada, K, Fukuyama, K.
Deposit date:2006-03-08
Release date:2006-04-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structures of gamma-glutamyltranspeptidase from Escherichia coli, a key enzyme in glutathione metabolism, and its reaction intermediate.
Proc.Natl.Acad.Sci.Usa, 103, 2006
3WTN
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BU of 3wtn by Molmil
Crystal Structure of Lymnaea stagnalis Acetylcholine Binding Protein Complexed with Desnitro-imidacloprid
Descriptor: (2Z)-1-[(6-chloropyridin-3-yl)methyl]imidazolidin-2-imine, Acetylcholine-binding protein, CADMIUM ION, ...
Authors:Okajima, T, Ihara, M, Yamashita, A, Oda, T, Matsuda, K.
Deposit date:2014-04-11
Release date:2015-02-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Studies on an acetylcholine binding protein identify a basic residue in loop G on the beta 1 strand as a new structural determinant of neonicotinoid actions
Mol.Pharmacol., 86, 2014
3WTL
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Crystal Structure of Lymnaea stagnalis Acetylcholine Binding Protein Complexed with Nitromethylene Analogue of Imidacloprid
Descriptor: 2-chloro-5-{[(2E)-2-(nitromethylidene)imidazolidin-1-yl]methyl}pyridine, Acetylcholine-binding protein
Authors:Okajima, T, Ihara, M, Yamashita, A, Oda, T, Matsuda, K.
Deposit date:2014-04-11
Release date:2015-02-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Studies on an acetylcholine binding protein identify a basic residue in loop G on the beta 1 strand as a new structural determinant of neonicotinoid actions
Mol.Pharmacol., 86, 2014
3WTJ
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Crystal Structure of Lymnaea stagnalis Acetylcholine Binding Protein Complexed with Thiacloprid
Descriptor: Acetylcholine-binding protein, {(2Z)-3-[(6-chloropyridin-3-yl)methyl]-1,3-thiazolidin-2-ylidene}cyanamide
Authors:Okajima, T, Ihara, M, Yamashita, A, Oda, T, Matsuda, K.
Deposit date:2014-04-11
Release date:2015-02-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Studies on an acetylcholine binding protein identify a basic residue in loop G on the beta 1 strand as a new structural determinant of neonicotinoid actions
Mol.Pharmacol., 86, 2014
3WTO
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Crystal Structure of Lymnaea stagnalis Acetylcholine-Binding Protein Q55R Mutant Complexed with Desnitro-imidacloprid
Descriptor: (2Z)-1-[(6-chloropyridin-3-yl)methyl]imidazolidin-2-imine, Acetylcholine-binding protein
Authors:Okajima, T, Ihara, M, Yamashita, A, Oda, T, Matsuda, K.
Deposit date:2014-04-11
Release date:2015-02-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Studies on an acetylcholine binding protein identify a basic residue in loop G on the beta 1 strand as a new structural determinant of neonicotinoid actions
Mol.Pharmacol., 86, 2014
3WTK
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Crystal Structure of Lymnaea stagnalis Acetylcholine-Binding Protein Q55R Mutant Complexed with Thiacloprid
Descriptor: Acetylcholine-binding protein, {(2Z)-3-[(6-chloropyridin-3-yl)methyl]-1,3-thiazolidin-2-ylidene}cyanamide
Authors:Okajima, T, Ihara, M, Yamashita, A, Oda, T, Matsuda, K.
Deposit date:2014-04-11
Release date:2015-02-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Studies on an acetylcholine binding protein identify a basic residue in loop G on the beta 1 strand as a new structural determinant of neonicotinoid actions
Mol.Pharmacol., 86, 2014

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