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PDB: 191 件
1V8K
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The Crystal Structure of the Minimal Functional Domain of the Microtubule Destabilizer KIF2C Complexed with Mg-AMPPNP
分子名称: Kinesin-like protein KIF2C, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
著者Ogawa, T, Nitta, R, Okada, Y, Hirokawa, N.
登録日2004-01-09
公開日2004-03-02
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献A common mechanism for microtubule destabilizers-M type kinesins stabilize curling of the protofilament using the class-specific neck and loops.
Cell(Cambridge,Mass.), 116, 2004
1V40
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First Inhibitor Complex Structure of Human Hematopoietic Prostaglandin D Synthase
分子名称: 3-(1,3-BENZOTHIAZOL-2-YL)-2-(1,4-DIOXO-1,2,3,4-TETRAHYDROPHTHALAZIN-6-YL)-5-[(E)-2-PHENYLVINYL]-3H-TETRAAZOL-2-IUM, GLUTATHIONE, GLYCEROL, ...
著者Inoue, T, Okano, Y, Kado, Y, Aritake, K, Irikura, D, Uodome, N, Kinugasa, S, Okazaki, N, Matsumura, H, Kai, Y, Urade, Y.
登録日2003-11-07
公開日2004-11-07
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献First determination of the inhibitor complex structure of human hematopoietic prostaglandin D synthase.
J.Biochem.(Tokyo), 135, 2004
3ATY
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Crystal structure of TcOYE
分子名称: FLAVIN MONONUCLEOTIDE, Prostaglandin F2a synthase
著者Yamaguchi, K, Okamoto, N, Tokuoka, K, Sugiyama, S, Uchiyama, N, Matsumura, H, Inaka, K, Urade, Y, Inoue, T.
登録日2011-01-26
公開日2011-05-04
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural insight into the stereoselective production of PGF2(alpha) by Old Yellow Enzyme from Trypanosoma cruzi
J.Biochem., 150, 2011
1UC5
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Structure of diol dehydratase complexed with (R)-1,2-propanediol
分子名称: AMMONIUM ION, CYANOCOBALAMIN, POTASSIUM ION, ...
著者Shibata, N, Nakanishi, Y, Fukuoka, M, Yamanishi, M, Yasuoka, N, Toraya, T.
登録日2003-04-08
公開日2003-07-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural rationalization for the lack of stereospecificity in coenzyme B12-dependent diol dehydratase
J.Biol.Chem., 278, 2003
1VFX
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Crystal Structure of the Kif1A Motor Domain Complexed With ADP-Mg-AlFx
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, ...
著者Nitta, R, Kikkawa, M, Okada, Y, Hirokawa, N.
登録日2004-04-19
公開日2004-08-10
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献KIF1A Alternately Uses Two Loops to Bind Microtubules
Science, 305, 2004
1NBB
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BU of 1nbb by Molmil
N-BUTYLISOCYANIDE BOUND RHODOBACTER CAPSULATUS CYTOCHROME C'
分子名称: CYTOCHROME C', N-BUTYL ISOCYANIDE, PROTOPORPHYRIN IX CONTAINING FE
著者Tahirov, T.H, Misaki, S, Meyer, T.E, Cusanovich, M.A, Higuchi, Y, Yasuoka, N.
登録日1996-03-18
公開日1996-08-17
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Concerted movement of side chains in the haem vicinity observed on ligand binding in cytochrome c' from rhodobacter capsulatus.
Nat.Struct.Biol., 3, 1996
2ZFL
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Crystal Structure of the Kif1A Motor Domain during Mg release: Mg-releasing Transition-3
分子名称: ADENOSINE-5'-DIPHOSPHATE, Kinesin-like protein KIF1A, Kinesin heavy chain isoform 5C
著者Nitta, R, Okada, Y, Hirokawa, N.
登録日2008-01-08
公開日2008-09-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural model for strain-dependent microtubule activation of Mg-ADP release from kinesin.
Nat.Struct.Mol.Biol., 15, 2008
1A7V
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CYTOCHROME C' FROM RHODOPSEUDOMONAS PALUSTRIS
分子名称: CYTOCHROME C', PROTOPORPHYRIN IX CONTAINING FE
著者Shibata, N, Iba, S, Misaki, S, Meyer, T.E, Bartsch, R.G, Cusanovich, M.A, Higuchi, Y, Yasuoka, N.
登録日1998-03-18
公開日1998-06-17
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Basis for monomer stabilization in Rhodopseudomonas palustris cytochrome c' derived from the crystal structure.
J.Mol.Biol., 284, 1998
2ZFM
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Crystal Structure of the Kif1A Motor Domain After Mg Release
分子名称: ADENOSINE-5'-DIPHOSPHATE, Kinesin-like protein KIF1A, Kinesin heavy chain isoform 5C
著者Nitta, R, Okada, Y, Hirokawa, N.
登録日2008-01-08
公開日2008-09-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献Structural model for strain-dependent microtubule activation of Mg-ADP release from kinesin.
Nat.Struct.Mol.Biol., 15, 2008
1AOA
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N-TERMINAL ACTIN-CROSSLINKING DOMAIN FROM HUMAN FIMBRIN
分子名称: T-FIMBRIN
著者Goldsmith, S.C, Pokala, N, Shen, W, Fedorov, A.A, Matsudaira, P, Almo, S.C.
登録日1997-06-30
公開日1997-12-31
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The structure of an actin-crosslinking domain from human fimbrin.
Nat.Struct.Biol., 4, 1997
2ZFJ
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Crystal Structure of the Kif1A Motor Domain during Mg release: Mg-releasing Transition-1
分子名称: ADENOSINE-5'-DIPHOSPHATE, Kinesin-like protein KIF1A, Kinesin heavy chain isoform 5C, ...
著者Nitta, R, Okada, Y, Hirokawa, N.
登録日2008-01-08
公開日2008-09-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural model for strain-dependent microtubule activation of Mg-ADP release from kinesin.
Nat.Struct.Mol.Biol., 15, 2008
1CPR
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ST. LOUIS CYTOCHROME C' FROM THE PURPLE PHOTOTROPIC BACTERIUM, RHODOBACTER CAPSULATUS
分子名称: CYTOCHROME C', PROTOPORPHYRIN IX CONTAINING FE, ZINC ION
著者Tahirov, T.H, Misaki, S, Meyer, T.E, Cusanovich, M.A, Yasuoka, N.
登録日1996-04-09
公開日1997-01-27
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of cytochrome c' from Rhodobacter capsulatus strain St Louis: an unusual molecular association induced by bridging Zn ions.
Acta Crystallogr.,Sect.D, 53, 1997
2ZFI
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BU of 2zfi by Molmil
Crystal Structure of the Kif1A Motor Domain Before Mg Release
分子名称: ADENOSINE-5'-DIPHOSPHATE, Kinesin-like protein KIF1A, Kinesin heavy chain isoform 5C, ...
著者Nitta, R, Okada, Y, Hirokawa, N.
登録日2008-01-07
公開日2008-09-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structural model for strain-dependent microtubule activation of Mg-ADP release from kinesin.
Nat.Struct.Mol.Biol., 15, 2008
2ZFK
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Crystal Structure of the Kif1A Motor Domain during Mg release: Mg-releasing Transition-2
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ADENOSINE-5'-DIPHOSPHATE, Kinesin-like protein KIF1A, ...
著者Nitta, R, Okada, Y, Hirokawa, N.
登録日2008-01-08
公開日2008-09-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.61 Å)
主引用文献Structural model for strain-dependent microtubule activation of Mg-ADP release from kinesin.
Nat.Struct.Mol.Biol., 15, 2008
1QVC
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BU of 1qvc by Molmil
CRYSTAL STRUCTURE ANALYSIS OF SINGLE STRANDED DNA BINDING PROTEIN (SSB) FROM E.COLI
分子名称: SINGLE STRANDED DNA BINDING PROTEIN MONOMER
著者Matsumoto, T, Morimoto, Y, Shibata, N, Shimamoto, N, Tsukihara, T, Yasuoka, N.
登録日1999-07-07
公開日2000-06-05
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Roles of functional loops and the C-terminal segment of a single-stranded DNA binding protein elucidated by X-Ray structure analysis.
J.Biochem.(Tokyo), 127, 2000
1VFV
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BU of 1vfv by Molmil
Crystal Structure of the Kif1A Motor Domain Complexed With Mg-AMPPNP
分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, PROTEIN (Fusion protein consisting of Kinesin-like protein KIF1A, ...
著者Nitta, R, Kikkawa, M, Okada, Y, Hirokawa, N.
登録日2004-04-19
公開日2004-08-10
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献KIF1A Alternately Uses Two Loops to Bind Microtubules
Science, 305, 2004
1VFW
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Crystal Structure of the Kif1A Motor Domain Complexed With Mg-AMPPNP
分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, PROTEIN (Fusion protein consisting of Kinesin-like protein KIF1A, ...
著者Nitta, R, Kikkawa, M, Okada, Y, Hirokawa, N.
登録日2004-04-19
公開日2004-08-10
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献KIF1A Alternately Uses Two Loops to Bind Microtubules
Science, 305, 2004
1VFZ
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Crystal Structure of the Kif1A Motor Domain Complexed With ADP-Mg-VO4
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PROTEIN (Fusion protein consisting of Kinesin-like protein KIF1A, ...
著者Nitta, R, Kikkawa, M, Okada, Y, Hirokawa, N.
登録日2004-04-19
公開日2004-08-10
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献KIF1A Alternately Uses Two Loops to Bind Microtubules
Science, 305, 2004
4R16
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Structure of UDP-D-MAnNAc dehdrogeanse from Pyrococcus horikoshii
分子名称: (2S,3S,4R,5S,6R)-5-acetamido-6-[[[(2R,3S,4R,5R)-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-3,4-bis(oxidanyl)oxane-2-carboxylic acid, 418aa long hypothetical UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase
著者Pampa, K.J, Lokanath, N.K, Rai, R.V, Kunishima, N.
登録日2014-08-04
公開日2015-10-14
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structure of UDP-D-MAnNAc dehdrogeanse from Pyrococcus horikoshii
To be Published
1C53
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S-CLASS CYTOCHROMES C HAVE A VARIETY OF FOLDING PATTERNS: STRUCTURE OF CYTOCHROME C-553 FROM DESULFOVIBRIO VULGARIS DETERMINED BY THE MULTI-WAVELENGTH ANOMALOUS DISPERSION METHOD
分子名称: CYTOCHROME C553, PROTOPORPHYRIN IX CONTAINING FE
著者Nakagawa, A, Higuchi, Y, Yasuoka, N, Katsube, Y, Yaga, T.
登録日1991-08-26
公開日1993-10-31
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献S-class cytochromes c have a variety of folding patterns: structure of cytochrome c-553 from Desulfovibrio vulgaris determined by the multi-wavelength anomalous dispersion method.
J.Biochem.(Tokyo), 108, 1990
6JVB
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Crystal Structure of Human CRMP2 1-532, AGE-modified
分子名称: Dihydropyrimidinase-related protein 2
著者Jiang, X, Ogawa, T, Hirokawa, N.
登録日2019-04-16
公開日2019-10-09
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Enhanced carbonyl stress induces irreversible multimerization of CRMP2 in schizophrenia pathogenesis.
Life Sci Alliance, 2, 2019
4RVC
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Structure of ATP binding subunit of ABC transporter
分子名称: ABC transporter ATP-binding protein
著者Manjula, M, Pampa, K.J, Lokanath, N.K.
登録日2014-11-26
公開日2015-03-18
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Crystal structure of ATP-binding subunit of an ABC transporter from Geobacillus kaustophilus.
Biochem.Biophys.Res.Commun., 459, 2015
2RDV
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RUBREDOXIN FROM DESULFOVIBRIO VULGARIS MIYAZAKI F, MONOCLINIC CRYSTAL FORM
分子名称: FE (III) ION, RUBREDOXIN
著者Higuchi, Y, Yasuoka, N.
登録日1998-10-07
公開日1999-05-18
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure determination of rubredoxin from Desulfovibrio vulgaris Miyazaki F in two crystal forms.
Acta Crystallogr.,Sect.D, 55, 1999
3FX5
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Structure of HIV-1 Protease in Complex with Potent Inhibitor KNI-272 Determined by High Resolution X-ray Crystallography
分子名称: (4R)-N-tert-butyl-3-[(2S,3S)-2-hydroxy-3-({N-[(isoquinolin-5-yloxy)acetyl]-S-methyl-L-cysteinyl}amino)-4-phenylbutanoyl]-1,3-thiazolidine-4-carboxamide, GLYCEROL, protease
著者Adachi, M, Ohhara, T, Tamada, T, Okazaki, N, Kuroki, R.
登録日2009-01-20
公開日2009-03-24
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (0.93 Å)
主引用文献Structure of HIV-1 protease in complex with potent inhibitor KNI-272 determined by high-resolution X-ray and neutron crystallography.
Proc.Natl.Acad.Sci.USA, 2009
4JP2
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Crystal Structure of TT0495 protein from Thermus thermophilus HB8
分子名称: 2-deoxy-D-gluconate 3-dehydrogenase
著者Pampa, K.J, Lokanath, N.K, Kunishima, N, Ravishnkar Rai, V.
登録日2013-03-19
公開日2014-03-19
最終更新日2014-08-13
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献The first crystal structure of NAD-dependent 3-dehydro-2-deoxy-D-gluconate dehydrogenase from Thermus thermophilus HB8
Acta Crystallogr.,Sect.D, 70, 2014

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