2UYR
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7VGP
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7VGO
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![BU of 7vgo by Molmil](/molmil-images/mine/7vgo) | Hen egg lysozyme | 分子名称: | CHLORIDE ION, Lysozyme C, SODIUM ION | 著者 | Oda, M, Ikura, T, Ito, N. | 登録日 | 2021-09-17 | 公開日 | 2022-02-23 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (1.2 Å) | 主引用文献 | Structural Analysis of Hen Egg Lysozyme Refolded after Denaturation at Acidic pH. Protein J., 41, 2022
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2DTM
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![BU of 2dtm by Molmil](/molmil-images/mine/2dtm) | Thermodynamic and structural analyses of hydrolytic mechanism by catalytic antibodies | 分子名称: | IMMUNOGLOBULIN 6D9 | 著者 | Oda, M, Ito, N, Tsumuraya, T, Suzuki, K, Fujii, I. | 登録日 | 2006-07-13 | 公開日 | 2007-05-29 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2.25 Å) | 主引用文献 | Thermodynamic and structural basis for transition-state stabilization in antibody-catalyzed hydrolysis J.Mol.Biol., 369, 2007
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1VFT
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![BU of 1vft by Molmil](/molmil-images/mine/1vft) | Crystal structure of L-cycloserine-bound form of alanine racemase from D-cycloserine-producing Streptomyces lavendulae | 分子名称: | CHLORIDE ION, D-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL]-N,O-CYCLOSERYLAMIDE, alanine racemase | 著者 | Noda, M, Matoba, Y, Kumagai, T, Sugiyama, M. | 登録日 | 2004-04-19 | 公開日 | 2004-09-14 | 最終更新日 | 2023-11-15 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Structural evidence that alanine racemase from a D-cycloserine-producing microorganism exhibits resistance to its own product. J.Biol.Chem., 279, 2004
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4FWB
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![BU of 4fwb by Molmil](/molmil-images/mine/4fwb) | Structure of Rhodococcus rhodochrous haloalkane dehalogenase mutant DhaA31 in complex with 1, 2, 3 - trichloropropane | 分子名称: | 1,2,3-trichloropropane, CHLORIDE ION, Haloalkane dehalogenase | 著者 | Lahoda, M, Stsiapanava, A, Mesters, J, Kuta Smatanova, I. | 登録日 | 2012-06-30 | 公開日 | 2012-09-05 | 最終更新日 | 2023-09-13 | 実験手法 | X-RAY DIFFRACTION (1.26 Å) | 主引用文献 | Crystallographic analysis of 1,2,3-trichloropropane biodegradation by the haloalkane dehalogenase DhaA31. Acta Crystallogr.,Sect.D, 70, 2014
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1WRJ
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8X3H
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3SK0
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![BU of 3sk0 by Molmil](/molmil-images/mine/3sk0) | structure of Rhodococcus rhodochrous haloalkane dehalogenase DhaA mutant DhaA12 | 分子名称: | CHLORIDE ION, Haloalkane dehalogenase | 著者 | Lahoda, M, Stsiapanava, A, Mesters, J, Koudelakova, T, Damborsky, J, Kuta-Smatanova, I. | 登録日 | 2011-06-22 | 公開日 | 2012-06-27 | 最終更新日 | 2023-09-13 | 実験手法 | X-RAY DIFFRACTION (1.78 Å) | 主引用文献 | Dynamics and hydration explain failed functional transformation in dehalogenase design. Nat.Chem.Biol., 10, 2014
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1VFH
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![BU of 1vfh by Molmil](/molmil-images/mine/1vfh) | Crystal structure of alanine racemase from D-cycloserine producing Streptomyces lavendulae | 分子名称: | PYRIDOXAL-5'-PHOSPHATE, alanine racemase | 著者 | Noda, M, Matoba, Y, Kumagai, T, Sugiyama, M. | 登録日 | 2004-04-13 | 公開日 | 2004-09-14 | 最終更新日 | 2023-11-15 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Structural evidence that alanine racemase from a D-cycloserine-producing microorganism exhibits resistance to its own product. J.Biol.Chem., 279, 2004
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1VFS
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![BU of 1vfs by Molmil](/molmil-images/mine/1vfs) | Crystal structure of D-cycloserine-bound form of alanine racemase from D-cycloserine-producing Streptomyces lavendulae | 分子名称: | CHLORIDE ION, D-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL]-N,O-CYCLOSERYLAMIDE, alanine racemase | 著者 | Noda, M, Matoba, Y, Kumagai, T, Sugiyama, M. | 登録日 | 2004-04-19 | 公開日 | 2004-09-14 | 最終更新日 | 2023-11-15 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | Structural evidence that alanine racemase from a D-cycloserine-producing microorganism exhibits resistance to its own product. J.Biol.Chem., 279, 2004
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3RK4
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![BU of 3rk4 by Molmil](/molmil-images/mine/3rk4) | Structure of Rhodococcus rhodochrous haloalkane dehalogenase mutant DhaA31 | 分子名称: | CHLORIDE ION, Haloalkane dehalogenase | 著者 | Lahoda, M, Stsiapanava, A, Mesters, J, Chaloupkova, R, Damborsky, J, Kuta Smatanova, I. | 登録日 | 2011-04-17 | 公開日 | 2012-04-18 | 最終更新日 | 2023-09-13 | 実験手法 | X-RAY DIFFRACTION (1.31 Å) | 主引用文献 | Crystallographic analysis of 1,2,3-trichloropropane biodegradation by the haloalkane dehalogenase DhaA31. Acta Crystallogr.,Sect.D, 70, 2014
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8YVW
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![BU of 8yvw by Molmil](/molmil-images/mine/8yvw) | Crystal structure of D12N mutant of L-azetidine-2-carboxylate hydrolase | 分子名称: | (S)-2-haloacid dehalogenase, FORMIC ACID, IMIDAZOLE, ... | 著者 | Toyoda, M, Mizutani, K, Mikami, B, Wackett, L.P, Esaki, N, Kurihara, T. | 登録日 | 2024-03-29 | 公開日 | 2024-05-08 | 実験手法 | X-RAY DIFFRACTION (1.19 Å) | 主引用文献 | Research for the crystal structure of L-azetidine-2-carboxylate hydrolase To Be Published
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8YWO
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![BU of 8ywo by Molmil](/molmil-images/mine/8ywo) | Crystal structure of L-azetidine-2-carboxylate hydrolase soaked in (S)-azetidine-2-carboxylic acid | 分子名称: | (2S)-azetidine-2-carboxylic acid, (S)-2-haloacid dehalogenase | 著者 | Toyoda, M, Mizutani, K, Mikami, B, Wackett, L.P, Esaki, N, Kurihara, T. | 登録日 | 2024-03-31 | 公開日 | 2024-05-08 | 実験手法 | X-RAY DIFFRACTION (1.58 Å) | 主引用文献 | Research for the crystal structure of L-azetidine-2-carboxylate hydrolase To Be Published
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3SMV
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![BU of 3smv by Molmil](/molmil-images/mine/3smv) | X-ray Crystal Structure of L-Azetidine-2-Carboxylate Hydrolase | 分子名称: | (S)-2-haloacid dehalogenase, GLYCEROL, IMIDAZOLE | 著者 | Toyoda, M, Mikami, B, Jitsumori, K, Wackett, L.P, Esaki, N, Kurihara, T. | 登録日 | 2011-06-28 | 公開日 | 2012-07-18 | 最終更新日 | 2024-06-12 | 実験手法 | X-RAY DIFFRACTION (1.38 Å) | 主引用文献 | Crystal structure of L-Azetidine-2-carboxylate hydrolase from Pseudomonas sp. strain A2C To be Published
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1WTA
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1G8U
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![BU of 1g8u by Molmil](/molmil-images/mine/1g8u) | MOLECULAR AND CRYSTAL STRUCTURE OF D(CGCGAATF5UCGCG):5-FORMYLURIDINE/ ADENOSINE BASE-PAIRS IN B-DNA | 分子名称: | 5'-D(*CP*GP*CP*GP*AP*AP*TP*(UFR)P*CP*GP*CP*G)-3' | 著者 | Tsunoda, M, Karino, N, Ueno, Y, Matsuda, A, Takenaka, A. | 登録日 | 2000-11-21 | 公開日 | 2001-02-05 | 最終更新日 | 2023-08-09 | 実験手法 | X-RAY DIFFRACTION (1.85 Å) | 主引用文献 | Crystallization and preliminary X-ray analysis of a DNA dodecamer containing 2'-deoxy-5-formyluridine; what is the role of magnesium cation in crystallization of Dickerson-type DNA dodecamers? Acta Crystallogr.,Sect.D, 57, 2001
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1G75
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![BU of 1g75 by Molmil](/molmil-images/mine/1g75) | MOLECULAR AND CRYSTAL STRUCTURE OF D(CGCGAATF5UCGCG): 5-FORMYLURIDINE/ ADENOSINE BASE-PAIRS IN B-DNA | 分子名称: | 5'-D(*CP*GP*CP*GP*AP*AP*TP*(UFR)P*CP*GP*CP*G)-3', MAGNESIUM ION, POTASSIUM ION | 著者 | Tsunoda, M, Karino, N, Ueno, Y, Matsuda, A, Takenaka, A. | 登録日 | 2000-11-09 | 公開日 | 2001-02-05 | 最終更新日 | 2023-08-09 | 実験手法 | X-RAY DIFFRACTION (1.57 Å) | 主引用文献 | Crystallization and preliminary X-ray analysis of a DNA dodecamer containing 2'-deoxy-5-formyluridine; what is the role of magnesium cation in crystallization of Dickerson-type DNA dodecamers? Acta Crystallogr.,Sect.D, 57, 2001
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1G8V
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![BU of 1g8v by Molmil](/molmil-images/mine/1g8v) | MOLECULAR AND CRYSTAL STRUCTURE OF D(CGCGAATF5UCGCG):5-FORMYLURIDINE/ ADENOSINE BASE-PAIRS IN B-DNA | 分子名称: | 5'-D(*CP*GP*CP*GP*AP*AP*TP*(UFR)P*CP*GP*CP*G)-3' | 著者 | Tsunoda, M, Karino, N, Ueno, Y, Matsuda, A, Takenaka, A. | 登録日 | 2000-11-21 | 公開日 | 2001-02-05 | 最終更新日 | 2023-08-09 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Crystallization and preliminary X-ray analysis of a DNA dodecamer containing 2'-deoxy-5-formyluridine; what is the role of magnesium cation in crystallization of Dickerson-type DNA dodecamers? Acta Crystallogr.,Sect.D, 57, 2001
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1G8N
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![BU of 1g8n by Molmil](/molmil-images/mine/1g8n) | MOLECULAR AND CRYSTAL STRUCTURE OF D(CGCGAATF5UCGCG):5-FORMYLURIDINE/ ADENOSINE BASE-PAIRS IN B-DNA | 分子名称: | 5'-D(*CP*GP*CP*GP*AP*AP*TP*(UFR)P*CP*GP*CP*G)-3', MAGNESIUM ION | 著者 | Tsunoda, M, Karino, N, Ueno, Y, Matsuda, A, Takenaka, A. | 登録日 | 2000-11-20 | 公開日 | 2001-02-05 | 最終更新日 | 2023-08-09 | 実験手法 | X-RAY DIFFRACTION (1.55 Å) | 主引用文献 | Crystallization and preliminary X-ray analysis of a DNA dodecamer containing 2'-deoxy-5-formyluridine; what is the role of magnesium cation in crystallization of Dickerson-type DNA dodecamers? Acta Crystallogr.,Sect.D, 57, 2001
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3A07
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![BU of 3a07 by Molmil](/molmil-images/mine/3a07) | Crystal Structure of Actinohivin; Potent anti-HIV Protein | 分子名称: | Actinohivin, SODIUM ION | 著者 | Tsunoda, M, Suzuki, K, Sagara, T, Takenaka, A. | 登録日 | 2009-03-04 | 公開日 | 2009-08-25 | 最終更新日 | 2017-10-11 | 実験手法 | X-RAY DIFFRACTION (1.19 Å) | 主引用文献 | Mechanism by which the lectin actinohivin blocks HIV infection of target cells Proc.Natl.Acad.Sci.USA, 106, 2009
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3AJL
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![BU of 3ajl by Molmil](/molmil-images/mine/3ajl) | Crystal structure of d(CGCGGATf5UCGCG): 5-Formyluridine:guanosine Base-pair in B-DNA with DAPI | 分子名称: | 5'-D(*CP*GP*CP*GP*GP*AP*TP*(UFR)P*CP*GP*CP*G)-3', 6-AMIDINE-2-(4-AMIDINO-PHENYL)INDOLE, MAGNESIUM ION | 著者 | Tsunoda, M, Sakaue, T, Ueno, Y, Matsuda, A, Takenaka, A. | 登録日 | 2010-06-07 | 公開日 | 2011-04-27 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | 主引用文献 | Insights into the structures of DNA damaged by hydroxyl radical: crystal structures of DNA duplexes containing 5-formyluracil J Nucleic Acids, 2010, 2010
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3AJK
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![BU of 3ajk by Molmil](/molmil-images/mine/3ajk) | Crystal structure of d(CGCGGATf5UCGCG): 5-Formyluridine:Guanosine Base-pair in B-DNA with Hoechst33258 | 分子名称: | 2'-(4-HYDROXYPHENYL)-5-(4-METHYL-1-PIPERAZINYL)-2,5'-BI-BENZIMIDAZOLE, 5'-D(*CP*GP*CP*GP*GP*AP*TP*(UFR)P*CP*GP*CP*G*)-3', MAGNESIUM ION | 著者 | Tsunoda, M, Sakaue, T, Ueno, Y, Matsuda, A, Takenaka, A. | 登録日 | 2010-06-07 | 公開日 | 2011-04-27 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.95 Å) | 主引用文献 | Insights into the structures of DNA damaged by hydroxyl radical: crystal structures of DNA duplexes containing 5-formyluracil J Nucleic Acids, 2010, 2010
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3AJJ
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![BU of 3ajj by Molmil](/molmil-images/mine/3ajj) | Crystal Structure of d(CGCGGATf5UCGCG): 5-Formyluridine/Guanosine Base-pair in B-DNA | 分子名称: | 5'-D(*CP*GP*CP*GP*GP*AP*TP*(UFR)P*CP*GP*CP*G)-3' | 著者 | Tsunoda, M, Sakaue, T, Ueno, Y, Matsuda, A, Takenaka, A. | 登録日 | 2010-06-07 | 公開日 | 2011-04-27 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (3.02 Å) | 主引用文献 | Insights into the structures of DNA damaged by hydroxyl radical: crystal structures of DNA duplexes containing 5-formyluracil J Nucleic Acids, 2010, 2010
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2DLC
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![BU of 2dlc by Molmil](/molmil-images/mine/2dlc) | Crystal structure of the ternary complex of yeast tyrosyl-tRNA synthetase | 分子名称: | MAGNESIUM ION, O-(ADENOSINE-5'-O-YL)-N-(L-TYROSYL)PHOSPHORAMIDATE, T-RNA (76-MER), ... | 著者 | Tsunoda, M, Kusakabe, Y, Tanaka, N, Nakamura, K.T. | 登録日 | 2006-04-18 | 公開日 | 2007-06-12 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Structural basis for recognition of cognate tRNA by tyrosyl-tRNA synthetase from three kingdoms. Nucleic Acids Res., 35, 2007
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