Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 7397 件

8B3V
DownloadVisualize
BU of 8b3v by Molmil
Hen Egg White Lysozyme 8s in situ crystallization
分子名称: 1,2-ETHANEDIOL, ACETATE ION, CHLORIDE ION, ...
著者Henkel, A, Galchenkova, M, Yefanov, O, Hakanpaeae, J, Chapman, H.N, Oberthuer, D.
登録日2022-09-16
公開日2022-11-30
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献JINXED: just in time crystallization for easy structure determination of biological macromolecules.
Iucrj, 10, 2023
1OCA
DownloadVisualize
BU of 1oca by Molmil
HUMAN CYCLOPHILIN A, UNLIGATED, NMR, 20 STRUCTURES
分子名称: CYCLOPHILIN A
著者Ottiger, M, Zerbe, O, Guntert, P, Wuthrich, K.
登録日1997-07-07
公開日1997-11-19
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献The NMR solution conformation of unligated human cyclophilin A.
J.Mol.Biol., 272, 1997
3HQ7
DownloadVisualize
BU of 3hq7 by Molmil
CcpA from G. sulfurreducens, G94K/K97Q/R100I variant
分子名称: CALCIUM ION, Cytochrome c551 peroxidase, PROTOPORPHYRIN IX CONTAINING FE
著者Hoffmann, M, Seidel, J, Einsle, O.
登録日2009-06-05
公開日2009-09-22
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献CcpA from Geobacter sulfurreducens is a basic di-heme cytochrome c peroxidase.
J.Mol.Biol., 393, 2009
6DD2
DownloadVisualize
BU of 6dd2 by Molmil
Crystal structure of Selaginella moellendorffii HCT
分子名称: Probable hydroxycinnamoyl transferase
著者Levsh, O, Chiang, Y.C, Lam, C.K, Wang, Y, Weng, J.K.
登録日2018-05-09
公開日2018-10-03
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.9056 Å)
主引用文献Structural and dynamic basis of substrate permissiveness in hydroxycinnamoyltransferase (HCT).
PLoS Comput. Biol., 14, 2018
1K07
DownloadVisualize
BU of 1k07 by Molmil
Native FEZ-1 metallo-beta-lactamase from Legionella gormanii
分子名称: ACETATE ION, FEZ-1 beta-lactamase, GLYCEROL, ...
著者Garcia-Saez, I, Mercuri, P.S, Kahn, R, Papamicael, C, Frere, J.M, Galleni, M, Dideberg, O.
登録日2001-09-18
公開日2003-01-21
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Three-dimensional Structure of FEZ-1, a Monomeric Subclass B3 Metallo-[beta]-lactamase from Fluoribacter gormanii, in Native Form and in Complex with -Captopril
J.MOL.BIOL., 325, 2003
8B3L
DownloadVisualize
BU of 8b3l by Molmil
Hen Egg White Lysozyme 2s in situ crystallization
分子名称: 1,2-ETHANEDIOL, ACETATE ION, CHLORIDE ION, ...
著者Henkel, A, Galchenkova, M, Yefanov, O, Hakanpaeae, J, Chapman, H.N, Oberthuer, D.
登録日2022-09-16
公開日2022-12-21
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献JINXED: just in time crystallization for easy structure determination of biological macromolecules.
Iucrj, 10, 2023
6DNS
DownloadVisualize
BU of 6dns by Molmil
Endo-fucoidan hydrolase MfFcnA9 from glycoside hydrolase family 107
分子名称: 1,2-ETHANEDIOL, Alpha-1,4-endofucoidanase, CALCIUM ION
著者Vickers, C, Abe, K, Salama-Alber, O, Boraston, A.B.
登録日2018-06-07
公開日2018-10-03
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献Endo-fucoidan hydrolases from glycoside hydrolase family 107 (GH107) display structural and mechanistic similarities to alpha-l-fucosidases from GH29.
J. Biol. Chem., 293, 2018
3GAY
DownloadVisualize
BU of 3gay by Molmil
Structure of Giardia fructose-1,6-biphosphate aldolase in complex with tagatose-1,6-biphosphate
分子名称: 1,6-di-O-phosphono-D-tagatose, Fructose-bisphosphate aldolase, ZINC ION
著者Galkin, A, Herzberg, O.
登録日2009-02-18
公開日2009-03-31
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural insights into the substrate binding and stereoselectivity of giardia fructose-1,6-bisphosphate aldolase.
Biochemistry, 48, 2009
3GC2
DownloadVisualize
BU of 3gc2 by Molmil
1.85 Angstrom Crystal Structure of O-succinylbenzoate Synthase from Salmonella typhimurium in Complex with Succinic Acid
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, SODIUM ION, ...
著者Minasov, G, Wawrzak, Z, Skarina, T, Onopriyenko, O, Peterson, S.N, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID), Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2009-02-21
公開日2009-03-10
最終更新日2017-11-01
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献1.85 Angstrom Crystal Structure of O-succinylbenzoate Synthase from Salmonella typhimurium in Complex with Succinic Acid
To be Published
3GIK
DownloadVisualize
BU of 3gik by Molmil
Dpo4 extension ternary complex with the oxoG(anti)-C(anti) pair
分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, 5'-D(*CP*TP*AP*AP*CP*(8OG)P*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*C)-3', 5'-D(*GP*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*GP*(DOC))-3', ...
著者Rechkoblit, O, Malinina, L, Patel, D.J.
登録日2009-03-05
公開日2009-05-19
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Impact of conformational heterogeneity of OxoG lesions and their pairing partners on bypass fidelity by Y family polymerases.
Structure, 17, 2009
6DWK
DownloadVisualize
BU of 6dwk by Molmil
SAMHD1 Bound to Fludarabine-TP in the Catalytic Pocket
分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-fluoro-9-{5-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]oxy}phosphoryl]-beta-D-arabinofuranosyl}-9H-purin-6-a mine, ...
著者Knecht, K.M, Buzovetsky, O, Schneider, C, Thomas, D, Srikanth, V, Kaderali, L, Tofoleanu, F, Reiss, K, Ferreiros, N, Geisslinger, G, Batista, V.S, Ji, X, Cinatl, J, Keppler, O.T, Xiong, Y.
登録日2018-06-26
公開日2018-10-10
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The structural basis for cancer drug interactions with the catalytic and allosteric sites of SAMHD1.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
1GX7
DownloadVisualize
BU of 1gx7 by Molmil
Best model of the electron transfer complex between cytochrome c3 and [Fe]-hydrogenase
分子名称: 1,3-PROPANEDITHIOL, CARBON MONOXIDE, CYANIDE ION, ...
著者Elantak, L, Morelli, X, Bornet, O, Hatchikian, C, Czjzek, M, Dolla, A, Guerlesquin, F.
登録日2002-03-28
公開日2003-07-31
最終更新日2019-11-27
実験手法SOLUTION NMR, THEORETICAL MODEL
主引用文献The Cytochrome C(3)-[Fe]-Hydrogenase Electron-Transfer Complex: Structural Model by NMR Restrained Docking
FEBS Lett., 548, 2003
3G5Q
DownloadVisualize
BU of 3g5q by Molmil
Crystal structure of Thermus thermophilus TrmFO
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, FLAVIN-ADENINE DINUCLEOTIDE, Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase trmFO
著者Nishimasu, H, Ishitani, R, Hori, H, Nureki, O.
登録日2009-02-05
公開日2009-05-19
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.102 Å)
主引用文献Atomic structure of a folate/FAD-dependent tRNA T54 methyltransferase
Proc.Natl.Acad.Sci.USA, 106, 2009
6DW3
DownloadVisualize
BU of 6dw3 by Molmil
SAMHD1 Bound to Cytarabine-TP in the Catalytic Pocket
分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, 4-amino-1-{5-O-[(S)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]oxy}phosphoryl]-beta-D-arabinofuranosyl}pyrimidin-2(1H)-one, Deoxynucleoside triphosphate triphosphohydrolase SAMHD1, ...
著者Knecht, K.M, Buzovetsky, O, Schneider, C, Thomas, D, Srikanth, V, Kaderali, L, Tofoleanu, F, Reiss, K, Ferreiros, N, Geisslinger, G, Batista, V.S, Ji, X, Cinatl, J, Keppler, O.T, Xiong, Y.
登録日2018-06-26
公開日2018-10-10
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The structural basis for cancer drug interactions with the catalytic and allosteric sites of SAMHD1.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
3GA7
DownloadVisualize
BU of 3ga7 by Molmil
1.55 Angstrom Crystal Structure of an Acetyl Esterase from Salmonella typhimurium
分子名称: Acetyl esterase, CHLORIDE ION
著者Minasov, G, Wawrzak, Z, Brunzelle, J, Onopriyenko, O, Skarina, T, Peterson, S.N, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2009-02-16
公開日2009-02-24
最終更新日2017-11-01
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献1.55 Angstrom Crystal Structure of an Acetyl Esterase from Salmonella typhimurium.
TO BE PUBLISHED
3GAK
DownloadVisualize
BU of 3gak by Molmil
Structure of Giardia fructose-1,6-biphosphate aldolase
分子名称: Fructose-bisphosphate aldolase, SULFATE ION, ZINC ION
著者Galkin, A, Herzberg, O.
登録日2009-02-17
公開日2009-03-31
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural insights into the substrate binding and stereoselectivity of giardia fructose-1,6-bisphosphate aldolase.
Biochemistry, 48, 2009
3GE1
DownloadVisualize
BU of 3ge1 by Molmil
2.7 Angstrom Crystal Structure of Glycerol Kinase (glpK) from Staphylococcus aureus in Complex with ADP and Glycerol
分子名称: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, GLYCEROL, ...
著者Minasov, G, Brunzelle, J, Skarina, T, Onopriyenko, O, Peterson, S.N, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2009-02-24
公開日2009-03-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献2.7 Angstrom Crystal Structure of Glycerol Kinase (glpK) from Staphylococcus aureus in Complex with ADP and Glycerol
To be Published
6DLH
DownloadVisualize
BU of 6dlh by Molmil
Endo-fucoidan hydrolase MfFcnA4 from glycoside hydrolase family 107
分子名称: 1,2-ETHANEDIOL, Alpha-1,4-endofucoidanase, CALCIUM ION, ...
著者Vickers, C, Abe, K, Salama-Alber, O, Boraston, A.B.
登録日2018-06-01
公開日2018-10-03
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Endo-fucoidan hydrolases from glycoside hydrolase family 107 (GH107) display structural and mechanistic similarities to alpha-l-fucosidases from GH29.
J. Biol. Chem., 293, 2018
1HDO
DownloadVisualize
BU of 1hdo by Molmil
Human biliverdin IX beta reductase: NADP complex
分子名称: BILIVERDIN IX BETA REDUCTASE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Pereira, P.J.B, Macedo-Ribeiro, S, Parraga, A, Perez-Luque, R, Cunningham, O, Darcy, K, Mantle, T.J, Coll, M.
登録日2000-11-16
公開日2001-02-28
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Structure of Human Biliverdin Ix Beta Reductase, an Early Fetal Bilirubin Ix Producing Enzyme
Nat.Struct.Biol., 8, 2001
3GFW
DownloadVisualize
BU of 3gfw by Molmil
Crystal Structure of Human Dual Specificity Protein Kinase (TTK) in complex with a pyrolo-pyridin ligand
分子名称: 1-(4-(4-(2-(isopropylsulfonyl)phenylamino)-1H-pyrrolo[2,3-b]pyridin-6-ylamino)-3-methoxyphenyl)piperidin-4-ol, 2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHANOL, Dual specificity protein kinase TTK
著者Filippakopoulos, P, Soundararajan, M, Choi, H, Keates, T, Elkins, J.M, King, O, Fedorov, O, Picaud, S.S, Pike, A.C.W, von Delft, F, Arrowsmith, C.H, Edwards, A, Weigelt, J, Bountra, C, Grey, N, Knapp, S, Structural Genomics Consortium (SGC)
登録日2009-02-27
公開日2009-03-17
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.74 Å)
主引用文献Small-molecule kinase inhibitors provide insight into Mps1 cell cycle function.
Nat.Chem.Biol., 6, 2010
1L9Z
DownloadVisualize
BU of 1l9z by Molmil
Thermus aquaticus RNA Polymerase Holoenzyme/Fork-Junction Promoter DNA Complex at 6.5 A Resolution
分子名称: MAGNESIUM ION, RNA POLYMERASE, ALPHA SUBUNIT, ...
著者Murakami, K.S, Masuda, S, Campbell, E.A, Muzzin, O, Darst, S.A.
登録日2002-03-27
公開日2002-05-31
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (6.5 Å)
主引用文献Structural basis of transcription initiation: an RNA polymerase holoenzyme-DNA complex.
Science, 296, 2002
1LJ0
DownloadVisualize
BU of 1lj0 by Molmil
Structure of quintuple mutant of the rat outer mitocondrial cytochrome b5.
分子名称: Cytochrome B5 outer mitochondrial membrane isoform, MAGNESIUM ION, PROTOPORPHYRIN IX CONTAINING FE
著者Cowley, A.B, Altuve, A, Kuchment, O, Terzyan, S, Zhang, X.C, Rivera, M, Benson, D.
登録日2002-04-18
公開日2002-11-20
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Toward engineering the stability and hemin binding properties of microsomal cytochromes b5 into rat outer mitochondrial cytochrome b5: Examining the influence of residues 25 and 71.
Biochemistry, 41, 2002
3FF1
DownloadVisualize
BU of 3ff1 by Molmil
Structure of Glucose 6-phosphate Isomerase from Staphylococcus aureus
分子名称: GLUCOSE-6-PHOSPHATE, Glucose-6-phosphate isomerase, SODIUM ION
著者Anderson, S.M, Brunzelle, J.S, Onopriyenko, O, Peterson, S, Anderson, W.F, Savchenko, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2008-12-01
公開日2009-02-03
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structure of Glucose 6-phosphate Isomerase from Staphylococcus aureus
TO BE PUBLISHED
1GNS
DownloadVisualize
BU of 1gns by Molmil
SUBTILISIN BPN'
分子名称: ACETONE, SUBTILISIN BPN'
著者Almog, O, Gallagher, D.T, Ladner, J.E, Strausberg, S, Alexander, P.
登録日2001-10-06
公開日2002-06-27
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural Basis of Thermostability. Analysis of Stabilizing Mutations in Subtilisin Bpn'.
J.Biol.Chem., 277, 2002
6DW5
DownloadVisualize
BU of 6dw5 by Molmil
SAMHD1 Bound to Gemcitabine-TP in the Catalytic Pocket
分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, 2'-deoxy-2',2'-difluorocytidine 5'-(tetrahydrogen triphosphate), Deoxynucleoside triphosphate triphosphohydrolase SAMHD1, ...
著者Knecht, K.M, Buzovetsky, O, Schneider, C, Thomas, D, Srikanth, V, Kaderali, L, Tofoleanu, F, Reiss, K, Ferreiros, N, Geisslinger, G, Batista, V.S, Ji, X, Cinatl, J, Keppler, O.T, Xiong, Y.
登録日2018-06-26
公開日2018-10-10
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献The structural basis for cancer drug interactions with the catalytic and allosteric sites of SAMHD1.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018

223532

件を2024-08-07に公開中

PDB statisticsPDBj update infoContact PDBjnumon