Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 7430 件

1WNJ
DownloadVisualize
BU of 1wnj by Molmil
NMR structure of human coactosin-like protein
分子名称: Coactosin-like protein
著者Liepinsh, E, Rakonjac, M, Boissonneault, V, Provost, P, Samuelsson, B, Radmark, O, Otting, G.
登録日2004-08-05
公開日2004-08-17
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献NMR structure of human coactosin-like protein
J.Biomol.Nmr, 30, 2004
3GBR
DownloadVisualize
BU of 3gbr by Molmil
Anthranilate phosphoribosyl-transferase (TRPD) double mutant D83G F149S from S. solfataricus
分子名称: 1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose, Anthranilate phosphoribosyltransferase, DI(HYDROXYETHYL)ETHER, ...
著者Bruning, M, Schlee, S, Deuss, M, Ivens, A, Mayans, O, Sterner, R.
登録日2009-02-20
公開日2009-12-15
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Activation of anthranilate phosphoribosyltransferase from Sulfolobus solfataricus by removal of magnesium inhibition and acceleration of product release
Biochemistry, 48, 2009
3BQY
DownloadVisualize
BU of 3bqy by Molmil
Crystal structure of a possible TetR family transcriptional regulator from Streptomyces coelicolor A3(2).
分子名称: ACETIC ACID, PHOSPHATE ION, Putative TetR family transcriptional regulator
著者Cuff, M.E, Skarina, T, Kagan, O, Edwards, A.M, Savchenko, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2007-12-20
公開日2008-01-15
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structure of a possible TetR family transcriptional regulator from Streptomyces coelicolor A3(2).
TO BE PUBLISHED
3GII
DownloadVisualize
BU of 3gii by Molmil
Dpo4 extension ternary complex with disordered A opposite an oxoG in anti conformation
分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, 5'-D(*CP*TP*AP*AP*CP*(8OG)P*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3', 5'-D(*GP*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*GP*(2DA))-3', ...
著者Rechkoblit, O, Malinina, L, Patel, D.J.
登録日2009-03-05
公開日2009-05-19
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Impact of conformational heterogeneity of OxoG lesions and their pairing partners on bypass fidelity by Y family polymerases.
Structure, 17, 2009
3GIL
DownloadVisualize
BU of 3gil by Molmil
Dpo4 extension ternary complex with oxoG(anti)-T(anti) pair
分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, 5'-D(*CP*TP*AP*AP*CP*(8OG)P*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*C)-3', 5'-D(*GP*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*GP*(2DT))-3', ...
著者Rechkoblit, O, Malinina, L, Patel, D.J.
登録日2009-03-05
公開日2009-05-19
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.71 Å)
主引用文献Impact of conformational heterogeneity of OxoG lesions and their pairing partners on bypass fidelity by Y family polymerases.
Structure, 17, 2009
6IU3
DownloadVisualize
BU of 6iu3 by Molmil
Crystal structure of iron transporter VIT1 with zinc ions
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, VIT1, ZINC ION
著者Kato, T, Nishizawa, T, Yamashita, K, Taniguchi, R, Kumazaki, K, Ishitani, R, Nureki, O.
登録日2018-11-27
公開日2019-02-06
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of plant vacuolar iron transporter VIT1.
Nat Plants, 5, 2019
3GEC
DownloadVisualize
BU of 3gec by Molmil
Crystal structure of a tandem PAS domain fragment of Drosophila PERIOD
分子名称: Period circadian protein
著者Yildiz, O, Wolf, E.
登録日2009-02-25
公開日2009-06-16
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (4 Å)
主引用文献Structural and functional analyses of PAS domain interactions of the clock proteins Drosophila PERIOD and mouse PERIOD2
Plos Biol., 7, 2009
6IDP
DownloadVisualize
BU of 6idp by Molmil
Crystal structure of Vibrio cholerae MATE transporter VcmN in the straight form
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, MATE family efflux transporter
著者Kusakizako, T, Claxton, D.P, Tanaka, Y, Maturana, A.D, Kuroda, T, Ishitani, R, Mchaourab, H.S, Nureki, O.
登録日2018-09-11
公開日2019-01-16
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.205 Å)
主引用文献Structural Basis of H+-Dependent Conformational Change in a Bacterial MATE Transporter.
Structure, 27, 2019
6IDR
DownloadVisualize
BU of 6idr by Molmil
Crystal structure of Vibrio cholerae MATE transporter VcmN in the bent form
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, MATE family efflux transporter
著者Kusakizako, T, Claxton, D.P, Tanaka, Y, Maturana, A.D, Kuroda, T, Ishitani, R, Mchaourab, H.S, Nureki, O.
登録日2018-09-11
公開日2019-01-16
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.502 Å)
主引用文献Structural Basis of H+-Dependent Conformational Change in a Bacterial MATE Transporter.
Structure, 27, 2019
5KJU
DownloadVisualize
BU of 5kju by Molmil
Crystal structure of Arabidopsis thaliana HCT in complex with p-coumaroylshikimate
分子名称: (3~{R},4~{S},5~{R})-3-[(~{E})-3-(4-hydroxyphenyl)prop-2-enoyl]oxy-4,5-bis(oxidanyl)cyclohexene-1-carboxylic acid, Shikimate O-hydroxycinnamoyltransferase
著者Levsh, O, Chiang, Y.C, Tung, C.F, Noel, J.P, Wang, Y, Weng, J.K.
登録日2016-06-20
公開日2016-11-02
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.44 Å)
主引用文献Dynamic Conformational States Dictate Selectivity toward the Native Substrate in a Substrate-Permissive Acyltransferase.
Biochemistry, 55, 2016
3D43
DownloadVisualize
BU of 3d43 by Molmil
The crystal structure of Sph at 0.8A
分子名称: CALCIUM ION, Sphericase
著者Almog, O.
登録日2008-05-13
公開日2009-04-28
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (0.8 Å)
主引用文献The crystal structures of the psychrophilic subtilisin S41 and the mesophilic subtilisin Sph reveal the same calcium-loaded state.
Proteins, 74, 2009
5KRI
DownloadVisualize
BU of 5kri by Molmil
Crystal Structure of the ER-alpha Ligand-binding Domain (Y537S) in Complex with 16b-benzyl 17b-estradiol
分子名称: (8~{R},9~{S},13~{S},14~{S},16~{R},17~{S})-13-methyl-16-(phenylmethyl)-6,7,8,9,11,12,14,15,16,17-decahydrocyclopenta[a]phenanthrene-3,17-diol, Estrogen receptor, NCOA2
著者Nwachukwu, J.C, Srinivasan, S, Bruno, N.E, Nowak, J, Kojetin, D.J, Elemento, O, Katzenellenbogen, J.A, Nettles, K.W.
登録日2016-07-07
公開日2017-01-18
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.247 Å)
主引用文献Systems Structural Biology Analysis of Ligand Effects on ER alpha Predicts Cellular Response to Environmental Estrogens and Anti-hormone Therapies.
Cell Chem Biol, 24, 2017
6HMH
DownloadVisualize
BU of 6hmh by Molmil
Structure of the GH99 endo-alpha-mannanase from Bacteroides xylanisolvens in complex with alpha-Glc-1,3-(1,2-anhydro-carba-glucosamine) and alpha-1,2-mannobiose
分子名称: (1~{S},2~{R},3~{R},4~{R},6~{S})-4-(hydroxymethyl)-7-azabicyclo[4.1.0]heptane-2,3-diol, ACETATE ION, Glycosyl hydrolase family 71, ...
著者Sobala, L.F, Lu, D, Zhu, S, Bernardo-Seisdedos, G, Millet, O, Zhang, Y, Sollogoub, M, Jimenez-Barbero, J, Davies, G.J.
登録日2018-09-12
公開日2018-09-26
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.03 Å)
主引用文献From 1,4-Disaccharide to 1,3-Glycosyl Carbasugar: Synthesis of a Bespoke Inhibitor of Family GH99 Endo-alpha-mannosidase.
Org.Lett., 20, 2018
3GC2
DownloadVisualize
BU of 3gc2 by Molmil
1.85 Angstrom Crystal Structure of O-succinylbenzoate Synthase from Salmonella typhimurium in Complex with Succinic Acid
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, SODIUM ION, ...
著者Minasov, G, Wawrzak, Z, Skarina, T, Onopriyenko, O, Peterson, S.N, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID), Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2009-02-21
公開日2009-03-10
最終更新日2017-11-01
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献1.85 Angstrom Crystal Structure of O-succinylbenzoate Synthase from Salmonella typhimurium in Complex with Succinic Acid
To be Published
3CEH
DownloadVisualize
BU of 3ceh by Molmil
Human liver glycogen phosphorylase (tense state) in complex with the allosteric inhibitor AVE5688
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 4-[3-(2-Chloro-4,5-difluoro-benzoyl)ureido]-3-trifluoromethoxybenzoic acid, Glycogen phosphorylase, ...
著者Wendt, K.U, Dreyer, M.K, Anderka, O, Klabunde, T, Loenze, P, Defossa, E, Schmoll, D.
登録日2008-02-29
公開日2008-05-27
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Thermodynamic characterization of allosteric glycogen phosphorylase inhibitors.
Biochemistry, 47, 2008
3CY2
DownloadVisualize
BU of 3cy2 by Molmil
Crystal structure of human proto-oncogene serine threonine kinase (PIM1) in complex with a consensus peptide and a beta carboline ligand II
分子名称: (4R)-7-chloro-9-methyl-1-oxo-1,2,4,9-tetrahydrospiro[beta-carboline-3,4'-piperidine]-4-carbonitrile, 1,2-ETHANEDIOL, CHLORIDE ION, ...
著者Filippakopoulos, P, Bullock, A, Fedorov, O, Huber, K, Bracher, F, Pike, A.C.W, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
登録日2008-04-25
公開日2008-07-15
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献7,8-Dichloro-1-oxo-beta-carbolines as a Versatile Scaffold for the Development of Potent and Selective Kinase Inhibitors with Unusual Binding Modes
J.Med.Chem., 55, 2012
3G5Q
DownloadVisualize
BU of 3g5q by Molmil
Crystal structure of Thermus thermophilus TrmFO
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, FLAVIN-ADENINE DINUCLEOTIDE, Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase trmFO
著者Nishimasu, H, Ishitani, R, Hori, H, Nureki, O.
登録日2009-02-05
公開日2009-05-19
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.102 Å)
主引用文献Atomic structure of a folate/FAD-dependent tRNA T54 methyltransferase
Proc.Natl.Acad.Sci.USA, 106, 2009
3GIK
DownloadVisualize
BU of 3gik by Molmil
Dpo4 extension ternary complex with the oxoG(anti)-C(anti) pair
分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, 5'-D(*CP*TP*AP*AP*CP*(8OG)P*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*C)-3', 5'-D(*GP*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*GP*(DOC))-3', ...
著者Rechkoblit, O, Malinina, L, Patel, D.J.
登録日2009-03-05
公開日2009-05-19
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Impact of conformational heterogeneity of OxoG lesions and their pairing partners on bypass fidelity by Y family polymerases.
Structure, 17, 2009
5LB3
DownloadVisualize
BU of 5lb3 by Molmil
Crystal structure of human RECQL5 helicase in complex with ADP/Mg.
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent DNA helicase Q5, MAGNESIUM ION, ...
著者Newman, J.A, Aitkenhead, H, Savitsky, P, Krojer, T, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Gileadi, O, Structural Genomics Consortium (SGC)
登録日2016-06-15
公開日2016-07-06
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Insights into the RecQ helicase mechanism revealed by the structure of the helicase domain of human RECQL5.
Nucleic Acids Res., 45, 2017
3GA7
DownloadVisualize
BU of 3ga7 by Molmil
1.55 Angstrom Crystal Structure of an Acetyl Esterase from Salmonella typhimurium
分子名称: Acetyl esterase, CHLORIDE ION
著者Minasov, G, Wawrzak, Z, Brunzelle, J, Onopriyenko, O, Skarina, T, Peterson, S.N, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2009-02-16
公開日2009-02-24
最終更新日2017-11-01
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献1.55 Angstrom Crystal Structure of an Acetyl Esterase from Salmonella typhimurium.
TO BE PUBLISHED
3GAK
DownloadVisualize
BU of 3gak by Molmil
Structure of Giardia fructose-1,6-biphosphate aldolase
分子名称: Fructose-bisphosphate aldolase, SULFATE ION, ZINC ION
著者Galkin, A, Herzberg, O.
登録日2009-02-17
公開日2009-03-31
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural insights into the substrate binding and stereoselectivity of giardia fructose-1,6-bisphosphate aldolase.
Biochemistry, 48, 2009
5KRA
DownloadVisualize
BU of 5kra by Molmil
Crystal Structure of the ER-alpha Ligand-binding Domain (Y537S) in Complex with DDT and DDE
分子名称: 1-[2,2-bis(chloranyl)-1-(4-chlorophenyl)ethenyl]-4-chloranyl-benzene, 1-chloranyl-4-[2,2,2-tris(chloranyl)-1-(4-chlorophenyl)ethyl]benzene, Estrogen receptor, ...
著者Nwachukwu, J.C, Srinivasan, S, Bruno, N.E, Nowak, J, Kojetin, D.J, Elemento, O, Katzenellenbogen, J.A, Nettles, K.W.
登録日2016-07-07
公開日2017-02-15
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.401 Å)
主引用文献Systems Structural Biology Analysis of Ligand Effects on ER alpha Predicts Cellular Response to Environmental Estrogens and Anti-hormone Therapies.
Cell Chem Biol, 24, 2017
6HAP
DownloadVisualize
BU of 6hap by Molmil
Adenylate kinase
分子名称: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE
著者Kantaev, R, Inbal, R, Goldenzweig, A, Barak, Y, Dym, O, Peleg, Y, Albek, S, Fleishman, S.J, Haran, G.
登録日2018-08-08
公開日2019-08-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Manipulating the Folding Landscape of a Multidomain Protein.
J.Phys.Chem.B, 122, 2018
3GGF
DownloadVisualize
BU of 3ggf by Molmil
Crystal structure of human Serine/threonine-protein kinase MST4 in complex with an quinazolin
分子名称: CADMIUM ION, Serine/threonine-protein kinase MST4, [4-({4-[(5-CYCLOPROPYL-1H-PYRAZOL-3-YL)AMINO]QUINAZOLIN-2-YL}IMINO)CYCLOHEXA-2,5-DIEN-1-YL]ACETONITRILE
著者Chaikuad, A, Rellos, P, Eidarus, S, Das, S, Pike, A.C.W, Sethi, R, Fedorov, O, Savitsky, P, Roos, A.K, Filippakopoulos, P, Arrowsmith, C.H, Edwards, A.M, Weigelt, J, Bountra, C, von Delft, F, Knapp, S, Structural Genomics Consortium (SGC)
登録日2009-02-27
公開日2009-03-24
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structural comparison of human mammalian ste20-like kinases
Plos One, 5, 2010
3G5R
DownloadVisualize
BU of 3g5r by Molmil
Crystal structure of Thermus thermophilus TrmFO in complex with tetrahydrofolate
分子名称: (6S)-5,6,7,8-TETRAHYDROFOLATE, 1,2-ETHANEDIOL, CALCIUM ION, ...
著者Nishimasu, H, Ishitani, R, Hori, H, Nureki, O.
登録日2009-02-05
公開日2009-05-19
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Atomic structure of a folate/FAD-dependent tRNA T54 methyltransferase
Proc.Natl.Acad.Sci.USA, 106, 2009

224931

件を2024-09-11に公開中

PDB statisticsPDBj update infoContact PDBjnumon