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PDB: 434 results

5H36
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BU of 5h36 by Molmil
Crystal structures of the TRIC trimeric intracellular cation channel orthologue from Rhodobacter sphaeroides
Descriptor: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Uncharacterized protein TRIC
Authors:Kasuya, G, Hiraizumi, M, Hattori, M, Nureki, O.
Deposit date:2016-10-20
Release date:2017-01-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.409 Å)
Cite:Crystal structures of the TRIC trimeric intracellular cation channel orthologues
Cell Res., 26, 2016
1V33
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BU of 1v33 by Molmil
Crystal structure of DNA primase from Pyrococcus horikoshii
Descriptor: DNA primase small subunit, PHOSPHATE ION, ZINC ION
Authors:Ito, N, Nureki, O, Shirouzu, M, Yokoyama, S, Hanaoka, F, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-10-25
Release date:2004-03-23
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the Pyrococcus horikoshii DNA primase-UTP complex: implications for the mechanism of primer synthesis.
Genes Cells, 8, 2003
1V34
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BU of 1v34 by Molmil
Crystal structure of Pyrococcus horikoshii DNA primase-UTP complex
Descriptor: DNA primase small subunit, URIDINE 5'-TRIPHOSPHATE, ZINC ION
Authors:Ito, N, Nureki, O, Shirouzu, M, Yokoyama, S, Hanaoka, F, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-10-25
Release date:2004-03-23
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of the Pyrococcus horikoshii DNA primase-UTP complex: implications for the mechanism of primer synthesis.
Genes Cells, 8, 2003
1UDS
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BU of 1uds by Molmil
Crystal structure of the tRNA processing enzyme RNase PH R126A mutant from Aquifex aeolicus
Descriptor: PHOSPHATE ION, Ribonuclease PH, SULFATE ION
Authors:Ishii, R, Nureki, O, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-05-02
Release date:2003-09-23
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of the tRNA Processing Enzyme RNase PH from Aquifex aeolicus
J.Biol.Chem., 278, 2003
7E7Z
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BU of 7e7z by Molmil
CryoEM structure of the human Kv4.2-KChIP1 complex, transmembrane region
Descriptor: Potassium voltage-gated channel subfamily D member 2
Authors:Kise, Y, Nureki, O.
Deposit date:2021-02-28
Release date:2021-10-06
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural basis of gating modulation of Kv4 channel complexes.
Nature, 599, 2021
7E83
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BU of 7e83 by Molmil
CryoEM structure of the human Kv4.2-KChIP1 complex, intracellular region
Descriptor: Kv channel-interacting protein 1, Potassium voltage-gated channel subfamily D member 2
Authors:Kise, Y, Nureki, O.
Deposit date:2021-02-28
Release date:2021-10-13
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural basis of gating modulation of Kv4 channel complexes.
Nature, 599, 2021
7E87
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BU of 7e87 by Molmil
CryoEM structure of the human Kv4.2-DPP6S complex, transmembrane and intracellular region
Descriptor: Dipeptidyl aminopeptidase-like protein 6, Potassium voltage-gated channel subfamily D member 2
Authors:Kise, Y, Nureki, O.
Deposit date:2021-03-01
Release date:2021-10-13
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural basis of gating modulation of Kv4 channel complexes.
Nature, 599, 2021
7E8H
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BU of 7e8h by Molmil
CryoEM structure of human Kv4.2-DPP6S-KChIP1 complex
Descriptor: Dipeptidyl aminopeptidase-like protein 6, Kv channel-interacting protein 1, Potassium voltage-gated channel subfamily D member 2
Authors:Kise, Y, Nureki, O.
Deposit date:2021-03-01
Release date:2021-10-13
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Structural basis of gating modulation of Kv4 channel complexes.
Nature, 599, 2021
7E84
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BU of 7e84 by Molmil
CryoEM structure of human Kv4.2-KChIP1 complex
Descriptor: Kv channel-interacting protein 1, Potassium voltage-gated channel subfamily D member 2
Authors:Kise, Y, Nureki, O.
Deposit date:2021-02-28
Release date:2021-10-13
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural basis of gating modulation of Kv4 channel complexes.
Nature, 599, 2021
7E8E
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BU of 7e8e by Molmil
CryoEM structure of human Kv4.2-DPP6S-KChIP1 complex, transmembrane and intracellular region
Descriptor: Dipeptidyl aminopeptidase-like protein 6, Kv channel-interacting protein 1, Potassium voltage-gated channel subfamily D member 2
Authors:Kise, Y, Nureki, O.
Deposit date:2021-03-01
Release date:2021-10-13
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structural basis of gating modulation of Kv4 channel complexes.
Nature, 599, 2021
7E8G
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BU of 7e8g by Molmil
CryoEM structure of human Kv4.2-DPP6S-KChIP1 complex, extracellular region
Descriptor: Dipeptidyl aminopeptidase-like protein 6
Authors:Kise, Y, Nureki, O.
Deposit date:2021-03-01
Release date:2021-10-13
Last modified:2022-02-16
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Structural basis of gating modulation of Kv4 channel complexes.
Nature, 599, 2021
7E89
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BU of 7e89 by Molmil
CryoEM structure of human Kv4.2-DPP6S complex, extracellular region
Descriptor: Dipeptidyl aminopeptidase-like protein 6
Authors:Kise, Y, Nureki, O.
Deposit date:2021-03-01
Release date:2021-10-13
Last modified:2022-02-16
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structural basis of gating modulation of Kv4 channel complexes.
Nature, 599, 2021
7E8B
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BU of 7e8b by Molmil
CryoEM structure of human Kv4.2-DPP6S complex
Descriptor: Dipeptidyl aminopeptidase-like protein 6, Potassium voltage-gated channel subfamily D member 2
Authors:Kise, Y, Nureki, O.
Deposit date:2021-03-01
Release date:2021-10-13
Last modified:2022-02-16
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structural basis of gating modulation of Kv4 channel complexes.
Nature, 599, 2021
8HIN
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BU of 8hin by Molmil
Structure of human SGLT2-MAP17 complex with Phlorizin
Descriptor: 1-[2-[(2S,3R,4S,5S,6R)-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-4,6-bis(oxidanyl)phenyl]-3-(4-hydroxyphenyl)propan-1-one, 2-acetamido-2-deoxy-beta-D-glucopyranose, PDZK1-interacting protein 1, ...
Authors:Hiraizumi, M, Kishida, H, Miyaguchi, I, Nureki, O.
Deposit date:2022-11-21
Release date:2023-11-22
Last modified:2024-02-07
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Transport and inhibition mechanism of the human SGLT2-MAP17 glucose transporter.
Nat.Struct.Mol.Biol., 31, 2024
7F3F
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BU of 7f3f by Molmil
CryoEM structure of human Kv4.2-KChIP1 complex
Descriptor: Isoform 2 of Kv channel-interacting protein 1, Potassium voltage-gated channel subfamily D member 2
Authors:Kise, Y, Nureki, O.
Deposit date:2021-06-16
Release date:2021-10-13
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural basis of gating modulation of Kv4 channel complexes.
Nature, 599, 2021
7F0J
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BU of 7f0j by Molmil
CryoEM structure of human Kv4.2
Descriptor: Potassium voltage-gated channel subfamily D member 2, ZINC ION
Authors:Kise, Y, Nureki, O.
Deposit date:2021-06-04
Release date:2021-10-13
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural basis of gating modulation of Kv4 channel complexes.
Nature, 599, 2021
2D1P
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BU of 2d1p by Molmil
crystal structure of heterohexameric TusBCD proteins, which are crucial for the tRNA modification
Descriptor: Hypothetical UPF0116 protein yheM, Hypothetical UPF0163 protein yheN, Hypothetical protein yheL, ...
Authors:Numata, T, Fukai, S, Ikeuchi, Y, Suzuki, T, Nureki, O.
Deposit date:2005-08-30
Release date:2006-02-28
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural Basis for Sulfur Relay to RNA Mediated by Heterohexameric TusBCD Complex
Structure, 14, 2006
2DR8
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BU of 2dr8 by Molmil
Complex structure of CCA-adding enzyme with tRNAminiDC and CTP
Descriptor: CCA-adding enzyme, CYTIDINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Tomita, K, Ishitani, R, Fukai, S, Nureki, O.
Deposit date:2006-06-08
Release date:2006-11-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Complete crystallographic analysis of the dynamics of CCA sequence addition
Nature, 443, 2006
1IQ8
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BU of 1iq8 by Molmil
Crystal Structure of archaeosine tRNA-guanine transglycosylase from Pyrococcus horikoshii
Descriptor: ARCHAEOSINE TRNA-GUANINE TRANSGLYCOSYLASE, MAGNESIUM ION, ZINC ION
Authors:Ishitani, R, Nureki, O, Fukai, S, Kijimoto, T, Nameki, N, Watanabe, M, Kondo, H, Sekine, M, Okada, N, Nishimura, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2001-07-09
Release date:2002-05-22
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of archaeosine tRNA-guanine transglycosylase.
J.Mol.Biol., 318, 2002
2DR9
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BU of 2dr9 by Molmil
Complex structure of CCA-adding enzyme with tRNAminiDCC
Descriptor: CCA-adding enzyme, SULFATE ION, tRNA (34-MER)
Authors:Tomita, K, Ishitani, R, Fukai, S, Nureki, O.
Deposit date:2006-06-08
Release date:2006-11-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Complete crystallographic analysis of the dynamics of CCA sequence addition
Nature, 443, 2006
2DRA
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BU of 2dra by Molmil
Complex structure of CCA-adding enzyme with tRNAminiDCC and ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CCA-adding enzyme, MAGNESIUM ION, ...
Authors:Tomita, K, Ishitani, R, Fukai, S, Nureki, O.
Deposit date:2006-06-08
Release date:2006-11-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Complete crystallographic analysis of the dynamics of CCA sequence addition
Nature, 443, 2006
2DR5
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BU of 2dr5 by Molmil
Complex structure of CCA adding enzyme with mini-helix lacking CCA
Descriptor: CCA-adding enzyme, SULFATE ION, tRNA (32-MER)
Authors:Tomita, K, Ishitani, R, Fukai, S, Nureki, O.
Deposit date:2006-06-08
Release date:2006-10-31
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Complete crystallographic analysis of the dynamics of CCA sequence addition
Nature, 443, 2006
2DR7
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BU of 2dr7 by Molmil
Complex structure of CCA-adding enzyme with tRNAminiDC
Descriptor: CCA-adding enzyme, SULFATE ION, tRNA (33-MER)
Authors:Tomita, K, Ishitani, R, Fukai, S, Nureki, O.
Deposit date:2006-06-08
Release date:2006-11-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Complete crystallographic analysis of the dynamics of CCA sequence addition
Nature, 443, 2006
2E7S
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BU of 2e7s by Molmil
Crystal structure of the yeast Sec2p GEF domain
Descriptor: Rab guanine nucleotide exchange factor SEC2
Authors:Fukai, S, Sato, Y, Nureki, O.
Deposit date:2007-01-12
Release date:2007-02-27
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3 Å)
Cite:Asymmetric Coiled-Coil Structure with Guanine Nucleotide Exchange Activity
Structure, 15, 2007
2EF1
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BU of 2ef1 by Molmil
Crystal structure of the extracellular domain of human CD38
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ADP-ribosyl cyclase 1
Authors:Kukimoto-Niino, M, Nureki, O, Murayama, K, Shirouzu, M, Katada, T, Hara-Yokoyama, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-02-20
Release date:2007-02-27
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the extracellular domain of human CD38
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