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PDB: 76 results

4EKV
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Streptavidin 8-aa-loop H127C mutein with reversible biotin binding
Descriptor: BIOTIN, CHLORIDE ION, Streptavidin
Authors:Barrette-Ng, I.H, Honetschlaeger, C, Wong, S.L, Ng, K.K.S.
Deposit date:2012-04-09
Release date:2012-06-13
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Development of a tetrameric streptavidin mutein with reversible biotin binding capability: engineering a mobile loop as an exit door for biotin.
Plos One, 7, 2012
5TSN
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BU of 5tsn by Molmil
Crystal structures of Norwalk virus polymerase bound to an RNA primer-template duplex
Descriptor: MANGANESE (II) ION, Norwalk virus polymerase, RNA (5'-R(*UP*GP*CP*CP*CP*GP*GP*G)-3')
Authors:Shaik, M.M, Ng, K.K.
Deposit date:2016-10-30
Release date:2017-04-12
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Norovirus RNA-dependent RNA polymerase: A computational study of metal-binding preferences.
Proteins, 85, 2017
2A3X
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BU of 2a3x by Molmil
Decameric crystal structure of human serum amyloid P-component bound to Bis-1,2-{[(Z)-2carboxy- 2-methyl-1,3-dioxane]- 5-yloxycarbonyl}-piperazine
Descriptor: BIS-1,2-{[(Z)-2CARBOXY-2-METHYL-1,3-DIOXANE]-5-YLOXYCARBONYL}-PIPERAZINE, CALCIUM ION, Serum amyloid P-component
Authors:Ho, J.G, Kitov, P.I, Paszkiewicz, E, Sadowska, J, Bundle, D.R, Ng, K.K.
Deposit date:2005-06-27
Release date:2005-07-26
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3 Å)
Cite:Ligand-assisted Aggregation of Proteins: DIMERIZATION OF SERUM AMYLOID P COMPONENT BY BIVALENT LIGANDS.
J.Biol.Chem., 280, 2005
2A3W
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Decameric structure of human serum amyloid P-component bound to Bis-1,2-{[(Z)-2-carboxy-2-methyl-1,3-dioxane]-5-yloxycarbamoyl}-ethane
Descriptor: BIS-1,2-{[(Z)-2-CARBOXY-2-METHYL-1,3-DIOXANE]-5-YLOXYCARBAMOYL}-ETHANE, CALCIUM ION, Serum amyloid P-component
Authors:Ho, J.G, Kitov, P.I, Paszkiewicz, E, Sadowska, J, Bundle, D.R, Ng, K.K.
Deposit date:2005-06-27
Release date:2005-07-26
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Ligand-assisted Aggregation of Proteins: DIMERIZATION OF SERUM AMYLOID P COMPONENT BY BIVALENT LIGANDS.
J.Biol.Chem., 280, 2005
4JO6
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BU of 4jo6 by Molmil
Streptavidin complex with SBP-Tag
Descriptor: SBP-Tag, Streptavidin
Authors:Barrette-Ng, I.H, Wu, S.C, Tjia, W.M, Wong, S.L, Ng, K.K.S.
Deposit date:2013-03-17
Release date:2013-05-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The structure of the SBP-Tag-streptavidin complex reveals a novel helical scaffold bridging binding pockets on separate subunits
Acta Crystallogr.,Sect.D, 69, 2013
2RD5
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BU of 2rd5 by Molmil
Structural basis for the regulation of N-acetylglutamate kinase by PII in Arabidopsis thaliana
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ARGININE, ...
Authors:Mizuno, Y, Moorhead, G.B.G, Ng, K.K.S.
Deposit date:2007-09-21
Release date:2007-10-02
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Structural Basis for the Regulation of N-Acetylglutamate Kinase by PII in Arabidopsis thaliana.
J.Biol.Chem., 282, 2007
2A3Y
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BU of 2a3y by Molmil
Pentameric crystal structure of human serum amyloid P-component bound to Bis-1,2-{[(Z)-2carboxy-2-methyl-1,3-dioxane]-5-yloxycarbamoyl}-ethane.
Descriptor: BIS-1,2-{[(Z)-2-CARBOXY-2-METHYL-1,3-DIOXANE]-5-YLOXYCARBAMOYL}-ETHANE, CALCIUM ION, Serum amyloid P-component
Authors:Ho, J.G, Kitov, P.I, Paszkiewicz, E, Sadowska, J, Bundle, D.R, Ng, K.K.
Deposit date:2005-06-27
Release date:2005-07-26
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Ligand-assisted Aggregation of Proteins: DIMERIZATION OF SERUM AMYLOID P COMPONENT BY BIVALENT LIGANDS.
J.Biol.Chem., 280, 2005
4ZTY
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BU of 4zty by Molmil
Neurospora crassa cobalamin-independent methionine synthase complexed with Cd2+
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CADMIUM ION, Cobalamin-Independent Methionine synthase, ...
Authors:Wheatley, R.W, Ng, K.K, Kapoor, M.
Deposit date:2015-05-15
Release date:2015-12-09
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Fungal cobalamin-independent methionine synthase: Insights from the model organism, Neurospora crassa.
Arch.Biochem.Biophys., 590, 2015
4ZTX
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Neurospora crassa cobalamin-independent methionine synthase complexed with Zn2+
Descriptor: Cobalamin-Independent Methionine synthase, GLYCEROL, NITRATE ION, ...
Authors:Wheatley, R.W, Ng, K.K, Kapoor, M.
Deposit date:2015-05-15
Release date:2015-12-09
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Fungal cobalamin-independent methionine synthase: Insights from the model organism, Neurospora crassa.
Arch.Biochem.Biophys., 590, 2015
2G7C
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BU of 2g7c by Molmil
Clostridium difficile Toxin A Fragment Bound to aGal(1,3)bGal(1,4)bGlcNAc
Descriptor: GLYCEROL, Toxin A, alpha-D-galactopyranose-(1-3)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Greco, A, Ho, J.G.S, Lin, S.J, Palcic, M.M, Rupnik, M, Ng, K.K.S.
Deposit date:2006-02-28
Release date:2006-04-18
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Carbohydrate recognition by Clostridium difficile toxin A.
Nat.Struct.Mol.Biol., 13, 2006
4FIY
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BU of 4fiy by Molmil
Crystal Structure of GlfT2 Complexed with UDP
Descriptor: GLYCEROL, MANGANESE (II) ION, UDP-galactofuranosyl transferase GlfT2, ...
Authors:Wheatley, R.W, Zheng, R.B, Lowary, T.L, Ng, K.K.S.
Deposit date:2012-06-11
Release date:2012-06-20
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Tetrameric Structure of the GlfT2 Galactofuranosyltransferase Reveals a Scaffold for the Assembly of Mycobacterial Arabinogalactan.
J.Biol.Chem., 287, 2012
4FIX
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BU of 4fix by Molmil
Crystal Structure of GlfT2
Descriptor: BETA-MERCAPTOETHANOL, GLYCEROL, MANGANESE (II) ION, ...
Authors:Wheatley, R.W, Zheng, R.B, Lowary, T.L, Ng, K.K.S.
Deposit date:2012-06-11
Release date:2012-06-20
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Tetrameric Structure of the GlfT2 Galactofuranosyltransferase Reveals a Scaffold for the Assembly of Mycobacterial Arabinogalactan.
J.Biol.Chem., 287, 2012
1G3D
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BU of 1g3d by Molmil
BOVINE BETA-TRYPSIN BOUND TO META-AMIDINO SCHIFF BASE COPPER (II) CHELATE
Descriptor: 2-(5-CARBAMIMIDOYL-2-HYDROXY-BENZYLAMINO)-PROPIONIC ACID, BETA-TRYPSIN, CALCIUM ION, ...
Authors:Toyota, E, Ng, K.K.S, Sekizaki, H, Itoh, K, Tanizawa, K, James, M.N.G.
Deposit date:2000-10-23
Release date:2001-01-17
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-ray crystallographic analyses of complexes between bovine beta-trypsin and Schiff base copper(II) or iron(III) chelates.
J.Mol.Biol., 305, 2001
1G3B
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BU of 1g3b by Molmil
BOVINE BETA-TRYPSIN BOUND TO META-AMIDINO SCHIFF BASE MAGNESIUM(II) CHELATE
Descriptor: 2-(5-CARBAMIMIDOYL-2-HYDROXY-BENZYLAMINO)-PROPIONIC ACID, BETA-TRYPSIN, CALCIUM ION, ...
Authors:Toyota, E, Ng, K.K.S, Sekizaki, H, Itoh, K, Tanizawa, K, James, M.N.G.
Deposit date:2000-10-23
Release date:2001-01-17
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-ray crystallographic analyses of complexes between bovine beta-trypsin and Schiff base copper(II) or iron(III) chelates.
J.Mol.Biol., 305, 2001
1G3E
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BU of 1g3e by Molmil
BOVINE BETA-TRYPSIN BOUND TO PARA-AMIDINO SCHIFF-BASE COPPER (II) CHELATE
Descriptor: 2-(4-CARBAMIMIDOYL-2-HYDROXY-BENZYLAMINO)-PROPIONIC ACID, BETA-TRYPSIN, CALCIUM ION, ...
Authors:Toyota, E, Ng, K.K.S, Sekizaki, H, Itoh, K, Tanizawa, K, James, M.N.G.
Deposit date:2000-10-23
Release date:2001-01-17
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-ray crystallographic analyses of complexes between bovine beta-trypsin and Schiff base copper(II) or iron(III) chelates.
J.Mol.Biol., 305, 2001
1K2I
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BU of 1k2i by Molmil
Crystal Structure of Gamma-Chymotrypsin in Complex with 7-Hydroxycoumarin
Descriptor: 2,4-DIHYDROXY-TRANS CINNAMIC ACID, CHYMOTRYPSINOGEN A, SULFATE ION
Authors:Ghani, U, Ng, K.K.S, Atta-ur-Rahman, Choudhary, M.I, Ullah, N, James, M.N.G.
Deposit date:2001-09-27
Release date:2001-12-05
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of gamma-chymotrypsin in complex with 7-hydroxycoumarin.
J.Mol.Biol., 314, 2001
1G3C
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BU of 1g3c by Molmil
BOVINE BETA-TRYPSIN BOUND TO PARA-AMIDINO SCHIFF BASE IRON(III) CHELATE
Descriptor: 2-(4-CARBAMIMIDOYL-2-HYDROXY-BENZYLAMINO)-PROPIONIC ACID, BETA-TRYPSIN, CALCIUM ION, ...
Authors:Toyota, E, Ng, K.K.S, Sekizaki, H, Itoh, K, Tanizawa, K, James, M.N.G.
Deposit date:2000-10-23
Release date:2001-01-17
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-ray crystallographic analyses of complexes between bovine beta-trypsin and Schiff base copper(II) or iron(III) chelates.
J.Mol.Biol., 305, 2001
6VJK
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BU of 6vjk by Molmil
Streptavidin mutant M88 (N49C/A86C)
Descriptor: BIOTIN, Streptavidin
Authors:Marangoni, J.M, Wu, S.C, Fogen, D, Wong, S.L, Ng, K.K.S.
Deposit date:2020-01-16
Release date:2020-12-23
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Engineering a disulfide-gated switch in streptavidin enables reversible binding without sacrificing binding affinity.
Sci Rep, 10, 2020
3BSO
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BU of 3bso by Molmil
Norwalk Virus polymerase bound to cytidine 5'-triphosphate and primer-template RNA
Descriptor: CYTIDINE-5'-TRIPHOSPHATE, GLYCEROL, MANGANESE (II) ION, ...
Authors:Zamyatkin, D.F, Ng, K.K.S.
Deposit date:2007-12-26
Release date:2008-01-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Structural insights into mechanisms of catalysis and inhibition in norwalk virus polymerase.
J.Biol.Chem., 283, 2008
4NC0
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BU of 4nc0 by Molmil
Crystal Structure of TcdA-A2 Bound to A26.8 VHH
Descriptor: A26.8 VHH, Cell wall-binding repeat protein
Authors:Murase, T, Eugenio, L, Schorr, M, Hussack, G, Tanha, J, Kitova, E.N, Klassen, J.S, Ng, K.K.S.
Deposit date:2013-10-23
Release date:2013-12-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Basis for Antibody Recognition in the Receptor-binding Domains of Toxins A and B from Clostridium difficile.
J.Biol.Chem., 289, 2014
4NBY
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BU of 4nby by Molmil
Crystal Structure of TcdA-A2 Bound to Two Molecules of A20.1 VHH
Descriptor: A20.1 VHH, Cell wall-binding repeat protein
Authors:Murase, T, Eugenio, L, Schorr, M, Hussack, G, Tanha, J, Kitova, E, Klassen, J.S, Ng, K.K.S.
Deposit date:2013-10-23
Release date:2013-12-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Structural Basis for Antibody Recognition in the Receptor-binding Domains of Toxins A and B from Clostridium difficile.
J.Biol.Chem., 289, 2014
6VJL
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BU of 6vjl by Molmil
Streptavidin mutant M112 (G26C/A46C)
Descriptor: BIOTIN, Streptavidin
Authors:Marangoni, J.M, Wu, S.C, Fogen, D, Wong, S.L, Ng, K.K.S.
Deposit date:2020-01-16
Release date:2020-12-23
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Engineering a disulfide-gated switch in streptavidin enables reversible binding without sacrificing binding affinity.
Sci Rep, 10, 2020
4NBZ
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BU of 4nbz by Molmil
Crystal Structure of TcdA-A1 Bound to A26.8 VHH
Descriptor: A26.8 VHH, TcdA
Authors:Murase, T, Eugenio, L, Schorr, M, Hussack, G, Tanha, J, Kitova, E.N, Klassen, J.S, Ng, K.K.S.
Deposit date:2013-10-23
Release date:2013-12-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural Basis for Antibody Recognition in the Receptor-binding Domains of Toxins A and B from Clostridium difficile.
J.Biol.Chem., 289, 2014
7UQO
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BU of 7uqo by Molmil
Pathogenesis related 10-10 (S)-tetrahydropapaverine complex
Descriptor: (1~{S})-1-[(3,4-dimethoxyphenyl)methyl]-6,7-dimethoxy-1,2,3,4-tetrahydroisoquinoline, Pathogenesis Related 10-10 protein
Authors:Carr, S.C, Ng, K.K.S.
Deposit date:2022-04-19
Release date:2023-03-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Alkaloid binding to opium poppy major latex proteins triggers structural modification and functional aggregation.
Nat Commun, 13, 2022
7UQN
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BU of 7uqn by Molmil
Pathogenesis related 10-10 noscapine complex
Descriptor: Pathogenesis Related 10-10 protein, noscapine
Authors:Carr, S.C, Ng, K.K.S.
Deposit date:2022-04-19
Release date:2023-03-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Alkaloid binding to opium poppy major latex proteins triggers structural modification and functional aggregation.
Nat Commun, 13, 2022

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