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PDB: 196 results

6RMB
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BU of 6rmb by Molmil
Crystal structure of the DEAH-box ATPase Prp2 in complex with Spp2 and ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Putative mRNA splicing factor, ...
Authors:Hamann, F, Neumann, P, Ficner, R.
Deposit date:2019-05-06
Release date:2020-02-05
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural analysis of the intrinsically disordered splicing factor Spp2 and its binding to the DEAH-box ATPase Prp2.
Proc.Natl.Acad.Sci.USA, 117, 2020
6RGO
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BU of 6rgo by Molmil
Complex of KlAtg21 with coiled-coil of AgAtg16
Descriptor: Autophagy protein 16, Autophagy-related protein 21
Authors:Thumm, M, Neumann, P.
Deposit date:2019-04-17
Release date:2020-05-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.701 Å)
Cite:Atg21 organizes Atg8 lipidation at the contact of the vacuole with the phagophore.
Autophagy, 2020
2RFM
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BU of 2rfm by Molmil
Structure of a Thermophilic Ankyrin Repeat Protein
Descriptor: 1,3-BUTANEDIOL, CHLORIDE ION, GLYCEROL, ...
Authors:Loew, C, Weininger, U, Neumann, P, Stubbs, M.T, Balbach, J.
Deposit date:2007-10-01
Release date:2008-03-11
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural insights into an equilibrium folding intermediate of an archaeal ankyrin repeat protein
Proc.Natl.Acad.Sci.Usa, 105, 2008
3GJX
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BU of 3gjx by Molmil
Crystal Structure of the Nuclear Export Complex CRM1-Snurportin1-RanGTP
Descriptor: CHLORIDE ION, Exportin-1, GTP-binding nuclear protein Ran, ...
Authors:Monecke, T, Guettler, T, Neumann, P, Dickmanns, A, Goerlich, D, Ficner, R.
Deposit date:2009-03-09
Release date:2009-05-26
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of the Nuclear Export Receptor CRM1 in Complex with Snurportin1 and RanGTP.
Science, 2009
5EK8
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BU of 5ek8 by Molmil
Crystal structure of a 9R-lipoxygenase from Cyanothece PCC8801 at 2.7 Angstroms
Descriptor: FE (II) ION, Lipoxygenase, SODIUM ION
Authors:Feussner, I, Ficner, R, Neumann, P, Newie, J, Andreou, A, Einsle, O.
Deposit date:2015-11-03
Release date:2015-12-23
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of a lipoxygenase from Cyanothece sp. may reveal novel features for substrate acquisition.
J.Lipid Res., 57, 2016
4K51
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BU of 4k51 by Molmil
Crystal Structure of the PCI domain of eIF3a
Descriptor: Eukaryotic translation initiation factor 3 subunit A
Authors:Khoshnevis, S, Neumann, P, Ficner, R.
Deposit date:2013-04-12
Release date:2014-01-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structural integrity of the PCI domain of eIF3a/TIF32 is required for mRNA recruitment to the 43S pre-initiation complexes.
Nucleic Acids Res., 42, 2014
6RM8
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BU of 6rm8 by Molmil
Crystal structure of the DEAH-box ATPase Prp2 in complex with Spp2 and ADP
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, ...
Authors:Hamann, F, Neumann, P, Ficner, R.
Deposit date:2019-05-06
Release date:2020-02-05
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural analysis of the intrinsically disordered splicing factor Spp2 and its binding to the DEAH-box ATPase Prp2.
Proc.Natl.Acad.Sci.USA, 117, 2020
6RMC
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BU of 6rmc by Molmil
Crystal structure of the DEAH-box ATPase Prp2 in complex with Spp2 and ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Putative mRNA splicing factor, ...
Authors:Hamann, F, Neumann, P, Schmitt, A, Ficner, R.
Deposit date:2019-05-06
Release date:2020-02-05
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural analysis of the intrinsically disordered splicing factor Spp2 and its binding to the DEAH-box ATPase Prp2.
Proc.Natl.Acad.Sci.USA, 117, 2020
6RMA
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BU of 6rma by Molmil
Crystal structure of the DEAH-box ATPase Prp2 in complex with Spp2 and ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, GLYCEROL, ...
Authors:Hamann, F, Neumann, P, Ficner, R.
Deposit date:2019-05-06
Release date:2020-02-05
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural analysis of the intrinsically disordered splicing factor Spp2 and its binding to the DEAH-box ATPase Prp2.
Proc.Natl.Acad.Sci.USA, 117, 2020
5MEE
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BU of 5mee by Molmil
Cyanothece lipoxygenase 2 (CspLOX2) variant - L304V
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Arachidonate 15-lipoxygenase, FE (III) ION, ...
Authors:Newie, J, Neumann, P, Werner, M, Mata, R.A, Ficner, R, Feussner, I.
Deposit date:2016-11-14
Release date:2017-05-31
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Lipoxygenase 2 from Cyanothece sp. controls dioxygen insertion by steric shielding and substrate fixation.
Sci Rep, 7, 2017
5MEG
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BU of 5meg by Molmil
Manganese-substituted Cyanothece lipoxygenase 2 (Mn-CspLOX2)
Descriptor: Arachidonate 15-lipoxygenase, CHLORIDE ION, ETHANOL, ...
Authors:Newie, J, Neumann, P, Werner, M, Mata, R.A, Ficner, R, Feussner, I.
Deposit date:2016-11-14
Release date:2017-05-31
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:Lipoxygenase 2 from Cyanothece sp. controls dioxygen insertion by steric shielding and substrate fixation.
Sci Rep, 7, 2017
3E07
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BU of 3e07 by Molmil
Crystal structure of spatzle cystine knot
Descriptor: GLYCEROL, Protein spaetzle
Authors:Hoffmann, A, Funkner, A, Neumann, P, Juhnke, S, Walther, M, Schierhorn, A, Weininger, U, Balbach, J, Reuter, G, Stubbs, M.T.
Deposit date:2008-07-31
Release date:2008-09-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Biophysical Characterization of Refolded Drosophila Spatzle, a Cystine Knot Protein, Reveals Distinct Properties of Three Isoforms
J.Biol.Chem., 283, 2008
3E7W
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BU of 3e7w by Molmil
Crystal structure of DLTA: Implications for the reaction mechanism of non-ribosomal peptide synthetase (NRPS) adenylation domains
Descriptor: ADENOSINE MONOPHOSPHATE, D-alanine--poly(phosphoribitol) ligase subunit 1, PHOSPHATE ION
Authors:Yonus, H, Neumann, P, Zimmermann, S, May, J.J, Marahiel, M.A, Stubbs, M.T.
Deposit date:2008-08-19
Release date:2008-09-09
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Crystal structure of DltA. Implications for the reaction mechanism of non-ribosomal peptide synthetase adenylation domains
J.Biol.Chem., 283, 2008
6YJ8
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BU of 6yj8 by Molmil
DarB-APO
Descriptor: ACETATE ION, CBS domain-containing protein YkuL, DI(HYDROXYETHYL)ETHER
Authors:Heidemann, J.L, Neumann, P, Ficner, R.
Deposit date:2020-04-02
Release date:2021-04-14
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:DarB from B. subtilis
To Be Published
6YJ9
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BU of 6yj9 by Molmil
DarB in complex with 3'3'cGAMP
Descriptor: 2-amino-9-[(2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-9-(6-amino-9H-purin-9-yl)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecin-2-yl]-1,9-dihydro-6H-purin-6-one, CBS domain-containing protein YkuL, CHLORIDE ION
Authors:Heidemann, J.L, Neumann, P, Ficner, R.
Deposit date:2020-04-02
Release date:2021-04-14
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:DarB from B. subtilis
To Be Published
6YJ7
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BU of 6yj7 by Molmil
DarB fom B. subtilis in complex with AMP
Descriptor: ADENOSINE MONOPHOSPHATE, CBS domain-containing protein YkuL, CHLORIDE ION
Authors:Heidemann, J.L, Neumann, P, Ficner, R.
Deposit date:2020-04-02
Release date:2021-04-14
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:DarB from B. subtilis
To Be Published
6YJA
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BU of 6yja by Molmil
DarB fom B. subtilis in complex with c-di-AMP
Descriptor: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, CALCIUM ION, CBS domain-containing protein YkuL, ...
Authors:Heidemann, J.L, Neumann, P, Ficner, R.
Deposit date:2020-04-02
Release date:2021-04-14
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:DarB from B. subtilis
To Be Published
5O5O
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BU of 5o5o by Molmil
X-ray crystal structure of RapZ from Escherichia coli (P32 space group)
Descriptor: RNase adapter protein RapZ, SULFATE ION
Authors:Gonzalez, G.M, Durica-Mitic, S, Hardwick, S.W, Moncrieffe, M, Resch, M, Neumann, P, Ficner, R, Gorke, B, Luisi, B.F.
Deposit date:2017-06-02
Release date:2017-08-30
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (3.404 Å)
Cite:Structural insights into RapZ-mediated regulation of bacterial amino-sugar metabolism.
Nucleic Acids Res., 45, 2017
5O5Q
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BU of 5o5q by Molmil
X-ray crystal structure of RapZ from Escherichia coli (P3221 space group)
Descriptor: RNase adapter protein RapZ, SULFATE ION
Authors:Gonzalez, G.M, Durica-Mitic, S, Hardwick, S.W, Moncrieffe, M, Resch, M, Neumann, P, Ficner, R, Gorke, B, Luisi, B.F.
Deposit date:2017-06-02
Release date:2017-08-30
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Structural insights into RapZ-mediated regulation of bacterial amino-sugar metabolism.
Nucleic Acids Res., 45, 2017
3E7X
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BU of 3e7x by Molmil
Crystal structure of DLTA: implications for the reaction mechanism of non-ribosomal peptide synthetase (NRPS) adenylation domains
Descriptor: ADENOSINE MONOPHOSPHATE, D-alanine--poly(phosphoribitol) ligase subunit 1
Authors:Yonus, H, Neumann, P, Zimmermann, S, May, J.J, Marahiel, M.A, Stubbs, M.T.
Deposit date:2008-08-19
Release date:2008-09-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of DltA. Implications for the reaction mechanism of non-ribosomal peptide synthetase adenylation domains
J.Biol.Chem., 283, 2008
7NZJ
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BU of 7nzj by Molmil
Structure of bsTrmB apo
Descriptor: GLYCEROL, SODIUM ION, tRNA (guanine-N(7)-)-methyltransferase
Authors:Blersch, K.F, Ficner, R, Neumann, P.
Deposit date:2021-03-24
Release date:2021-09-15
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Structural model of the M7G46 Methyltransferase TrmB in complex with tRNA.
Rna Biol., 18, 2021
7NZI
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BU of 7nzi by Molmil
TrmB complex with SAH
Descriptor: GLYCEROL, S-ADENOSYL-L-HOMOCYSTEINE, tRNA (guanine-N(7)-)-methyltransferase
Authors:Blersch, K.F, Ficner, R, Neumann, P.
Deposit date:2021-03-24
Release date:2021-09-15
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural model of the M7G46 Methyltransferase TrmB in complex with tRNA.
Rna Biol., 18, 2021
7NYB
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BU of 7nyb by Molmil
TrmB complex with SAM
Descriptor: S-ADENOSYLMETHIONINE, tRNA (guanine-N(7)-)-methyltransferase
Authors:Blersch, K.F, Ficner, R, Neumann, P.
Deposit date:2021-03-22
Release date:2021-09-15
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural model of the M7G46 Methyltransferase TrmB in complex with tRNA.
Rna Biol., 18, 2021
3EY6
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BU of 3ey6 by Molmil
Crystal structure of the FK506-binding domain of human FKBP38
Descriptor: FK506-binding protein 8
Authors:Parthier, C, Maestre-Martinez, M, Neumann, P, Edlich, F, Fischer, G, Luecke, C, Stubbs, M.T.
Deposit date:2008-10-19
Release date:2009-10-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:A charge-sensitive loop in the FKBP38 catalytic domain modulates Bcl-2 binding.
J.Mol.Recognit., 24, 2011
5O5S
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BU of 5o5s by Molmil
X-ray crystal structure of the RapZ C-terminal domain from Escherichia coli
Descriptor: MALONATE ION, RNase adapter protein RapZ
Authors:Gonzalez, G.M, Durica-Mitic, S, Hardwick, S.W, Moncrieffe, M, Resch, M, Neumann, P, Ficner, R, Gorke, B, Luisi, B.F.
Deposit date:2017-06-02
Release date:2017-08-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.17 Å)
Cite:Structural insights into RapZ-mediated regulation of bacterial amino-sugar metabolism.
Nucleic Acids Res., 45, 2017

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