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PDB: 196 results

3S0C
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BU of 3s0c by Molmil
Transaldolase wt of Thermoplasma acidophilum
Descriptor: GLYCEROL, Probable transaldolase
Authors:Lehwess-Litzmann, A, Neumann, P, Parthier, C, Tittmann, K.
Deposit date:2011-05-13
Release date:2011-08-24
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Twisted Schiff base intermediates and substrate locale revise transaldolase mechanism.
Nat.Chem.Biol., 7, 2011
3S1W
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BU of 3s1w by Molmil
Transaldolase variant Lys86Ala from Thermoplasma acidophilum in complex with glycerol and citrate
Descriptor: CITRATE ANION, GLYCEROL, Probable transaldolase
Authors:Lehwess-Litzmann, A, Neumann, P, Parthier, C, Tittmann, K.
Deposit date:2011-05-16
Release date:2011-08-24
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Twisted Schiff base intermediates and substrate locale revise transaldolase mechanism.
Nat.Chem.Biol., 7, 2011
3S1V
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BU of 3s1v by Molmil
Transaldolase from Thermoplasma acidophilum in complex with D-fructose 6-phosphate Schiff-base intermediate
Descriptor: FRUCTOSE -6-PHOSPHATE, GLYCEROL, Probable transaldolase
Authors:Lehwess-Litzmann, A, Neumann, P, Parthier, C, Tittmann, K.
Deposit date:2011-05-16
Release date:2011-08-24
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Twisted Schiff base intermediates and substrate locale revise transaldolase mechanism.
Nat.Chem.Biol., 7, 2011
3OE1
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BU of 3oe1 by Molmil
Pyruvate decarboxylase variant Glu473Asp from Z. mobilis in complex with reaction intermediate 2-lactyl-ThDP
Descriptor: 3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-2-(1-CARBOXY-1-HYDROXYETHYL)-5-(2-{[HYDROXY(PHOSPHONOOXY)PHOSPHORYL]OXY}ETHYL)-4-METHYL-1,3-THIAZOL-3-IUM, GLYCEROL, MAGNESIUM ION, ...
Authors:Meyer, D, Neumann, P, Parthier, C, Tittmann, K.
Deposit date:2010-08-12
Release date:2010-09-08
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.985 Å)
Cite:Double duty for a conserved glutamate in pyruvate decarboxylase: evidence of the participation in stereoelectronically controlled decarboxylation and in protonation of the nascent carbanion/enamine intermediate .
Biochemistry, 49, 2010
3OH2
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BU of 3oh2 by Molmil
Protein structure of USP from L. major bound to URIDINE-5'-DIPHOSPHATE-GALACTOSE
Descriptor: GALACTOSE-URIDINE-5'-DIPHOSPHATE, GLYCEROL, UDP-sugar pyrophosphorylase
Authors:Dickmanns, A, Damerow, S, Neumann, P, Schulz, E.-C, Lamerz, A, Routier, F, Ficner, R.
Deposit date:2010-08-17
Release date:2010-11-17
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Structural basis for the broad substrate range of the UDP-sugar pyrophosphorylase from Leishmania major.
J.Mol.Biol., 405, 2011
3OH3
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BU of 3oh3 by Molmil
Protein structure of USP from L. major bound to URIDINE-5'-DIPHOSPHATE -Arabinose
Descriptor: GLYCEROL, UDP-sugar pyrophosphorylase, [(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl (2S,3R,4S,5S)-3,4,5-trihydroxytetrahydro-2H-pyran-2-yl dihydrogen diphosphate
Authors:Dickmanns, A, Damerow, S, Neumann, P, Schulz, E.-C, Lamerz, A, Routier, F, Ficner, R.
Deposit date:2010-08-17
Release date:2010-11-17
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Structural basis for the broad substrate range of the UDP-sugar pyrophosphorylase from Leishmania major.
J.Mol.Biol., 405, 2011
3OH4
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BU of 3oh4 by Molmil
Protein structure of USP from L. major bound to URIDINE-5'-DIPHOSPHATE Glucose
Descriptor: GLYCEROL, UDP-sugar pyrophosphorylase, URIDINE-5'-DIPHOSPHATE-GLUCOSE
Authors:Dickmanns, A, Damerow, S, Neumann, P, Schulz, E.-C, Lamerz, A, Routier, F.H, Ficner, R.
Deposit date:2010-08-17
Release date:2010-11-17
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Structural basis for the broad substrate range of the UDP-sugar pyrophosphorylase from Leishmania major.
J.Mol.Biol., 405, 2011
3OH1
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BU of 3oh1 by Molmil
Protein structure of USP from L. major bound to URIDINE-5'-DIPHOSPHATE-Galacturonic acid
Descriptor: (2S,3R,4S,5R,6R)-6-[[[(2R,3S,4R,5R)-5-(2,4-dioxopyrimidin-1-yl)-3,4-dihydroxy-oxolan-2-yl]methoxy-hydroxy-phosphoryl]oxy-hydroxy-phosphoryl]oxy-3,4,5-trihydroxy-oxane-2-carboxylic acid, GLYCEROL, UDP-sugar pyrophosphorylase
Authors:Dickmanns, A, Damerow, S, Neumann, P, Schulz, E.-C, Lamerz, A, Routier, F, Ficner, R.
Deposit date:2010-08-17
Release date:2010-11-17
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Structural basis for the broad substrate range of the UDP-sugar pyrophosphorylase from Leishmania major.
J.Mol.Biol., 405, 2011
3OH0
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BU of 3oh0 by Molmil
Protein structure of USP from L. major bound to URIDINE-5'-TRIPHOSPHATE
Descriptor: GLYCEROL, UDP-sugar pyrophosphorylase, URIDINE 5'-TRIPHOSPHATE
Authors:Dickmanns, A, Damerow, S, Neumann, P, Schulz, E.-C, Lamerz, A, Routier, F, Ficner, R.
Deposit date:2010-08-17
Release date:2010-11-17
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural basis for the broad substrate range of the UDP-sugar pyrophosphorylase from Leishmania major.
J.Mol.Biol., 405, 2011
8OHO
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BU of 8oho by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry H11
Descriptor: 1-cyclopentyl-3-[[(2~{S})-oxolan-2-yl]methyl]urea, Cyclic di-AMP synthase CdaA, MAGNESIUM ION, ...
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-21
Release date:2024-04-03
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry H11
To Be Published
8OGV
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BU of 8ogv by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry C08
Descriptor: (3S)-3-hydroxy-2-methyl-2,3-dihydro-1H-isoindol-1-one, Cyclic di-AMP synthase CdaA, MAGNESIUM ION
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-20
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry C08
To Be Published
8OGO
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BU of 8ogo by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry A12
Descriptor: 3-(propan-2-yl)-1,2,4-oxadiazol-5(4H)-one, Cyclic di-AMP synthase CdaA, MAGNESIUM ION
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-20
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.21 Å)
Cite:PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry A12
To Be Published
8OGN
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BU of 8ogn by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry A09
Descriptor: Cyclic di-AMP synthase CdaA, MAGNESIUM ION, [1,2]thiazolo[5,4-b]pyridin-3-amine
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-20
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:CdaA in complex with fragment F2X-Entry A09
To Be Published
8OH0
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BU of 8oh0 by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry D08
Descriptor: 1-(2-ethylsulfonylethyl)-1,3,3-trimethyl-urea, Cyclic di-AMP synthase CdaA, MAGNESIUM ION
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-20
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.27 Å)
Cite:PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry D08
To Be Published
8OF6
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BU of 8of6 by Molmil
Structure of YtoQ
Descriptor: SULFATE ION, YtoQ
Authors:Garbers, T.B, Neumann, P, Ficner, R.
Deposit date:2023-03-14
Release date:2024-03-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of YtoQ
To Be Published
8OGU
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BU of 8ogu by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry C07
Descriptor: 3,4-dihydro-1~{H}-quinolin-2-one, Cyclic di-AMP synthase CdaA, MAGNESIUM ION
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-20
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry C07
To Be Published
8OGM
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BU of 8ogm by Molmil
Crystal structure of CdaA from Bacillus subtilis
Descriptor: Cyclic di-AMP synthase CdaA
Authors:Garbers, T.B, Neumann, P, Weiss, M.S, Wollenhaupt, J, Ficner, R.
Deposit date:2023-03-20
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Crystal structure of CdaA from Bacillus subtilis
To Be Published
8OGZ
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BU of 8ogz by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry D06
Descriptor: (3-methoxyphenyl)-pyrrol-1-yl-methanone, Cyclic di-AMP synthase CdaA, MAGNESIUM ION
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-20
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.14 Å)
Cite:PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry D06
To Be Published
8OGT
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BU of 8ogt by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry C04
Descriptor: 2-hydrazinyl-4-methoxypyrimidine, Cyclic di-AMP synthase CdaA, MAGNESIUM ION
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-20
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry C04
To Be Published
8OGQ
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BU of 8ogq by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry B06
Descriptor: (1S)-1-(4-nitrophenyl)ethan-1-ol, Cyclic di-AMP synthase CdaA, MAGNESIUM ION
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-20
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry B06
To Be Published
8OGP
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BU of 8ogp by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry B03
Descriptor: 2-[(1~{S})-1-azanylpropyl]phenol, Cyclic di-AMP synthase CdaA, MAGNESIUM ION
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-20
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry B03
To Be Published
8OH1
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BU of 8oh1 by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry E04
Descriptor: 3-phenyl-1,2-oxazol-5-amine, Cyclic di-AMP synthase CdaA, MAGNESIUM ION
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-20
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry E04
To Be Published
8OGR
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BU of 8ogr by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry B07
Descriptor: Cyclic di-AMP synthase CdaA, MAGNESIUM ION, N-[3-(diethylamino)phenyl]ethanamide
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-20
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry B07
To Be Published
8OGK
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BU of 8ogk by Molmil
Crystal structure of CdaA from Bacillus subtilis co-crystallized with DMSO
Descriptor: Cyclic di-AMP synthase CdaA, DIMETHYL SULFOXIDE, MAGNESIUM ION
Authors:Garbers, T.B, Neumann, P, Ficner, R.
Deposit date:2023-03-20
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.18 Å)
Cite:Crystal structure of CdaA from Bacillus subtilis co-crystallized with DMSO
To Be Published
8OGY
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BU of 8ogy by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry D04
Descriptor: Cyclic di-AMP synthase CdaA, MAGNESIUM ION, methyl 4-fluoro-L-phenylalaninate
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-20
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry D04
To Be Published

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