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PDB: 292 results

2EOT
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BU of 2eot by Molmil
SOLUTION STRUCTURE OF EOTAXIN, AN ENSEMBLE OF 32 NMR SOLUTION STRUCTURES
Descriptor: EOTAXIN
Authors:Crump, M.P, Rajarathnam, K, Kim, K.-S, Clark-Lewis, I, Sykes, B.D.
Deposit date:1998-06-29
Release date:1998-11-11
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Solution structure of eotaxin, a chemokine that selectively recruits eosinophils in allergic inflammation.
J.Biol.Chem., 273, 1998
2D4W
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Crystal structure of glycerol kinase from Cellulomonas sp. NT3060
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, glycerol kinase
Authors:Imada, K, Tamura, T, Namba, K, Inagaki, K.
Deposit date:2005-10-24
Release date:2006-11-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of glycerol kinase from Cellulomonas sp. NT3060
To be Published
2E0Z
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Crystal structure of virus-like particle from Pyrococcus furiosus
Descriptor: Virus-like particle
Authors:Akita, F, Chong, K.T, Tanaka, H, Yamashita, E, Miyazaki, N, Nakaishi, Y, Namba, K, Ono, Y, Suzuki, M, Tsukihara, T, Nakagawa, A.
Deposit date:2006-10-16
Release date:2007-04-17
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:The Crystal Structure of a Virus-like Particle from the Hyperthermophilic Archaeon Pyrococcus furiosus Provides Insight into the Evolution of Viruses
J.Mol.Biol., 368, 2007
2D4U
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Crystal Structure of the ligand binding domain of the bacterial serine chemoreceptor Tsr
Descriptor: Methyl-accepting chemotaxis protein I
Authors:Imada, K, Tajima, H, Namba, K, Sakuma, M, Homma, M, Kawagishi, I.
Deposit date:2005-10-24
Release date:2006-11-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Ligand specificity determined by differentially arranged common ligand-binding residues in the bacterial amino acid chemoreceptors Tsr and Tar.
J.Biol.Chem., 2011
1SDF
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BU of 1sdf by Molmil
SOLUTION STRUCTURE OF STROMAL CELL-DERIVED FACTOR-1 (SDF-1), NMR, MINIMIZED AVERAGE STRUCTURE
Descriptor: STROMAL CELL-DERIVED FACTOR-1
Authors:Crump, M.P, Rajarathnam, K, Clark-Lewis, I, Sykes, B.D.
Deposit date:1997-11-15
Release date:1998-01-28
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Solution structure and basis for functional activity of stromal cell-derived factor-1; dissociation of CXCR4 activation from binding and inhibition of HIV-1.
EMBO J., 16, 1997
3A5X
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BU of 3a5x by Molmil
L-type straight flagellar filament made of full-length flagellin
Descriptor: Flagellin
Authors:Maki-Yonekura, S, Yonekura, K, Namba, K.
Deposit date:2009-08-13
Release date:2010-03-16
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Conformational change of flagellin for polymorphic supercoiling of the flagellar filament
Nat.Struct.Mol.Biol., 17, 2010
1T50
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BU of 1t50 by Molmil
NMR SOLUTION STRUCTURE OF APLYSIA ATTRACTIN
Descriptor: Attractin
Authors:Ravindranath, G, Xu, Y, Schein, C.H, Rajaratnam, K, Painter, S.D, Nagle, G.T, Braun, W.
Deposit date:2004-04-30
Release date:2004-05-11
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:NMR Solution Structure of Attractin, a Water-Borne Pheromone from the Mollusk Aplysia Attractin
Biochemistry, 42, 2003
3A5I
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BU of 3a5i by Molmil
Structure of the cytoplasmic domain of FlhA
Descriptor: Flagellar biosynthesis protein flhA
Authors:Imada, K, Saijo-Hamano, Y, Shimada, M, Namba, K.
Deposit date:2009-08-07
Release date:2010-03-09
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of the cytoplasmic domain of FlhA and implication for flagellar type III protein export
Mol.Microbiol., 76, 2010
1EOT
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BU of 1eot by Molmil
SOLUTION NMR STRUCTURE OF EOTAXIN, MINIMIZED AVERAGE STRUCTURE
Descriptor: EOTAXIN
Authors:Crump, M.P, Rajarathnam, K, Sykes, B.D.
Deposit date:1998-06-17
Release date:1999-01-13
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Solution structure of eotaxin, a chemokine that selectively recruits eosinophils in allergic inflammation.
J.Biol.Chem., 273, 1998
2ZVY
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BU of 2zvy by Molmil
Structure of the periplasmic domain of MotB from Salmonella (crystal form II)
Descriptor: Chemotaxis protein motB
Authors:Kojima, S, Homma, M, Namba, K, Imada, K.
Deposit date:2008-11-26
Release date:2009-09-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Stator assembly and activation mechanism of the flagellar motor by the periplasmic region of MotB
Mol.Microbiol., 73, 2009
2ZVZ
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Structure of the periplasmic domain of MotB from Salmonella (crystal form III)
Descriptor: Chemotaxis protein motB
Authors:Imada, K, Kojima, S, Namba, K, Homma, S.
Deposit date:2008-11-26
Release date:2009-09-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Stator assembly and activation mechanism of the flagellar motor by the periplasmic region of MotB
Mol.Microbiol., 73, 2009
2ZF8
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BU of 2zf8 by Molmil
Crystal structure of MotY
Descriptor: Component of sodium-driven polar flagellar motor
Authors:Imada, K, Kojima, S, Namba, K, Homma, M.
Deposit date:2007-12-25
Release date:2008-07-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Insights into the stator assembly of the Vibrio flagellar motor from the crystal structure of MotY
Proc.Natl.Acad.Sci.Usa, 105, 2008
2ZOV
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BU of 2zov by Molmil
Structure of the periplasmic domain of MotB from Salmonella (crystal form I)
Descriptor: Chemotaxis protein motB
Authors:Imada, K, Kojima, S, Namba, K, Homma, M.
Deposit date:2008-06-09
Release date:2009-06-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Stator assembly and activation mechanism of the flagellar motor by the periplasmic region of MotB
Mol.Microbiol., 73, 2009
1GTT
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BU of 1gtt by Molmil
CRYSTAL STRUCTURE OF HPCE
Descriptor: 4-HYDROXYPHENYLACETATE DEGRADATION BIFUNCTIONAL ISOMERASE/DECARBOXYLASE, CALCIUM ION
Authors:Tame, J.R.H, Namba, K, Dodson, E.J, Roper, D.I.
Deposit date:2002-01-18
Release date:2002-03-08
Last modified:2019-07-24
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Crystal Structure of Hpce, a Bifunctional Decarboxylase/Isomerase with a Multifunctional Fold.
Biochemistry, 41, 2002
1I7O
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BU of 1i7o by Molmil
CRYSTAL STRUCTURE OF HPCE
Descriptor: 4-HYDROXYPHENYLACETATE DEGRADATION BIFUNCTIONAL ISOMERASE/DECARBOXYLASE, CALCIUM ION
Authors:Tame, J.R.H, Namba, K, Dodson, E.J, Roper, D.I.
Deposit date:2001-03-10
Release date:2001-03-28
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The crystal structure of HpcE, a multi-functional enzyme fold
To be Published
3A69
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BU of 3a69 by Molmil
Atomic model of the bacterial flagellar hook based on docking an X-ray derived structure and terminal two alpha-helices into an 7.1 angstrom resolution cryoEM map
Descriptor: Flagellar hook protein flgE
Authors:Fujii, T, Kato, T, Namba, K.
Deposit date:2009-08-26
Release date:2009-12-15
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (7.1 Å)
Cite:Specific arrangement of alpha-helical coiled coils in the core domain of the bacterial flagellar hook for the universal joint function
Structure, 17, 2009
1TX9
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BU of 1tx9 by Molmil
gpd prior to capsid assembly
Descriptor: Scaffolding protein D
Authors:Morais, M.C, Fisher, M, Kanamaru, K, Fane, B.A, Rossmann, M.G.
Deposit date:2004-06-24
Release date:2005-04-26
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3.31 Å)
Cite:Conformational switching by the scaffolding protein D directs the assembly of bacteriophage phiX174
Mol.Cell, 15, 2004

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