5Y8A
| Periplasmic heme-binding protein BhuT in complex with two hemes (holo-2 form) | 分子名称: | CALCIUM ION, PROTOPORPHYRIN IX CONTAINING FE, Putative hemin transport system, ... | 著者 | Nakamura, N, Naoe, Y, Rahman, M.M, Shiro, Y, Sugimoto, H. | 登録日 | 2017-08-20 | 公開日 | 2017-10-11 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (2.001 Å) | 主引用文献 | Structural basis for binding and transfer of heme in bacterial heme-acquisition systems Proteins, 85, 2017
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5GIZ
| Periplasmic heme-binding protein BhuT in apo form | 分子名称: | CHLORIDE ION, Putative hemin transport system, substrate-binding protein, ... | 著者 | Nakamura, N, Naoe, Y, Rahman, M.M, Shiro, Y, Sugimoto, H. | 登録日 | 2016-06-26 | 公開日 | 2017-06-28 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.5 Å) | 主引用文献 | Structural basis for binding and transfer of heme in bacterial heme-acquisition systems. Proteins, 85, 2017
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1UE8
| Crystal Structure of Thermophilic Cytochrome P450 from Sulfolobus tokodaii | 分子名称: | 367aa long hypothetical cytochrome P450, CHLORIDE ION, PROTOPORPHYRIN IX CONTAINING FE | 著者 | Nakamura, N, Kamitori, S, Ohno, H. | 登録日 | 2003-05-09 | 公開日 | 2004-07-13 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (3 Å) | 主引用文献 | Structure and direct electrochemistry of cytochrome P450 from the thermoacidophilic crenarchaeon, Sulfolobus tokodaii strain 7 J.Inorg.Biochem., 98, 2004
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1C8I
| BINDING MODE OF HYDROXYLAMINE TO ARTHROMYCES RAMOSUS PEROXIDASE | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, HYDROXYAMINE, ... | 著者 | Wariishi, H, Nonaka, D, Johjima, T, Nakamura, N, Naruta, Y, Kubo, K, Fukuyama, K. | 登録日 | 2000-05-08 | 公開日 | 2001-01-17 | 最終更新日 | 2024-10-09 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Direct binding of hydroxylamine to the heme iron of Arthromyces ramosus peroxidase. Substrate analogue that inhibits compound I formation in a competetive manner. J.Biol.Chem., 275, 2000
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5B58
| Inward-facing conformation of ABC heme importer BhuUV in complex with periplasmic heme binding protein BhuT from Burkholderia cenocepacia | 分子名称: | Hemin import ATP-binding protein HmuV, Putative hemin ABC transport system, membrane protein, ... | 著者 | Naoe, Y, Nakamura, N, Doi, A, Shiro, Y, Sugimoto, H. | 登録日 | 2016-04-25 | 公開日 | 2016-11-23 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (3.21 Å) | 主引用文献 | Crystal structure of bacterial haem importer complex in the inward-facing conformation Nat Commun, 7, 2016
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5B57
| Inward-facing conformation of ABC heme importer BhuUV from Burkholderia cenocepacia | 分子名称: | DECYL-BETA-D-MALTOPYRANOSIDE, Hemin import ATP-binding protein HmuV, Putative hemin ABC transport system, ... | 著者 | Naoe, Y, Nakamura, N, Doi, A, Shiro, Y, Sugimoto, H. | 登録日 | 2016-04-25 | 公開日 | 2016-11-16 | 最終更新日 | 2024-04-03 | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | 主引用文献 | Crystal structure of bacterial haem importer complex in the inward-facing conformation Nat Commun, 7, 2016
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8WDV
| Photosynthetic LH1-RC complex from the purple sulfur bacterium Allochromatium vinosum purified by Ca2+-DEAE | 分子名称: | (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (2S)-3-hydroxypropane-1,2-diyl dihexadecanoate, Antenna complex alpha/beta subunit, ... | 著者 | Tani, K, Kanno, R, Harada, A, Kobayashi, A, Minamino, A, Nakamura, N, Ji, X.-C, Purba, E.R, Hall, M, Yu, L.-J, Madigan, M.T, Mizoguchi, A, Iwasaki, K, Humbel, B.M, Kimura, Y, Wang-Otomo, Z.-Y. | 登録日 | 2023-09-16 | 公開日 | 2024-02-21 | 最終更新日 | 2024-05-08 | 実験手法 | ELECTRON MICROSCOPY (2.24 Å) | 主引用文献 | High-resolution structure and biochemical properties of the LH1-RC photocomplex from the model purple sulfur bacterium, Allochromatium vinosum. Commun Biol, 7, 2024
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8WDU
| Photosynthetic LH1-RC complex from the purple sulfur bacterium Allochromatium vinosum purified by sucrose density | 分子名称: | (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (2S)-3-hydroxypropane-1,2-diyl dihexadecanoate, Antenna complex alpha/beta subunit, ... | 著者 | Tani, K, Kanno, R, Harada, A, Kobayashi, A, Minamino, A, Nakamura, N, Ji, X.-C, Purba, E.R, Hall, M, Yu, L.-J, Madigan, M.T, Mizoguchi, A, Iwasaki, K, Humbel, B.M, Kimura, Y, Wang-Otomo, Z.-Y. | 登録日 | 2023-09-16 | 公開日 | 2024-02-21 | 最終更新日 | 2024-05-08 | 実験手法 | ELECTRON MICROSCOPY (2.24 Å) | 主引用文献 | High-resolution structure and biochemical properties of the LH1-RC photocomplex from the model purple sulfur bacterium, Allochromatium vinosum. Commun Biol, 7, 2024
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6JWF
| Holo form of Pyranose Dehydrogenase PQQ domain from Coprinopsis cinerea | 分子名称: | 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, ... | 著者 | Takeda, K, Ishida, T, Yoshida, M, Samejima, M, Ohno, H, Igarashi, K, Nakamura, N. | 登録日 | 2019-04-20 | 公開日 | 2019-11-06 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (1.3 Å) | 主引用文献 | Crystal Structure of the Catalytic and CytochromebDomains in a Eukaryotic Pyrroloquinoline Quinone-Dependent Dehydrogenase. Appl.Environ.Microbiol., 85, 2019
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5Y89
| Periplasmic heme-binding protein BhuT in complex with one heme (holo-1) | 分子名称: | ACETATE ION, PROTOPORPHYRIN IX CONTAINING FE, Putative hemin transport system, ... | 著者 | Naoe, Y, Nakamura, N, Rahman, M.M, Shiro, Y, Sugimoto, H. | 登録日 | 2017-08-20 | 公開日 | 2017-10-11 | 最終更新日 | 2024-03-27 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Structural basis for binding and transfer of heme in bacterial heme-acquisition systems Proteins, 85, 2017
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5Y8B
| Periplasmic heme-binding protein RhuT from Roseiflexus sp. RS-1 in apo form | 分子名称: | MAGNESIUM ION, Periplasmic binding protein | 著者 | Rahman, M.M, Naoe, Y, Nakamura, N, Doi, A, Shiro, Y, Sugimoto, H. | 登録日 | 2017-08-20 | 公開日 | 2017-10-11 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Structural basis for binding and transfer of heme in bacterial heme-acquisition systems Proteins, 85, 2017
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5GJ3
| Periplasmic heme-binding protein RhuT from Roseiflexus sp. RS-1 in two-heme bound form (holo-2) | 分子名称: | PROTOPORPHYRIN IX CONTAINING FE, Periplasmic binding protein, ZINC ION | 著者 | Rahman, M.M, Naoe, Y, Nakamura, N, Shiro, Y, Sugimoto, H. | 登録日 | 2016-06-26 | 公開日 | 2017-06-28 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Structural basis for binding and transfer of heme in bacterial heme-acquisition systems. Proteins, 85, 2017
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6JT5
| Crystal structure of PQQ doamin of Pyranose Dehydrogenase from Coprinopsis cinerea: apo-from | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Extracellular PQQ-dependent sugar dehydrogenase, ... | 著者 | Takeda, K, Ishida, T, Yoshida, M, Samejima, M, Ohno, H, Igarashi, K, Nakamura, N. | 登録日 | 2019-04-09 | 公開日 | 2019-11-06 | 最終更新日 | 2020-07-29 | 実験手法 | X-RAY DIFFRACTION (1.5 Å) | 主引用文献 | Crystal Structure of the Catalytic and CytochromebDomains in a Eukaryotic Pyrroloquinoline Quinone-Dependent Dehydrogenase. Appl.Environ.Microbiol., 85, 2019
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6JT6
| Crystal structure of cytochrome b domain of Pyranose Dehydrogenase from Coprinopsis cinerea | 分子名称: | (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, ... | 著者 | Takeda, K, Ishida, T, Yoshida, M, Samejima, M, Ohno, H, Igarashi, K, Nakamura, N. | 登録日 | 2019-04-09 | 公開日 | 2019-11-13 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Crystal Structure of the Catalytic and CytochromebDomains in a Eukaryotic Pyrroloquinoline Quinone-Dependent Dehydrogenase. Appl.Environ.Microbiol., 85, 2019
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3B4X
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