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PDB: 15 件

5Y8A
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BU of 5y8a by Molmil
Periplasmic heme-binding protein BhuT in complex with two hemes (holo-2 form)
分子名称: CALCIUM ION, PROTOPORPHYRIN IX CONTAINING FE, Putative hemin transport system, ...
著者Nakamura, N, Naoe, Y, Rahman, M.M, Shiro, Y, Sugimoto, H.
登録日2017-08-20
公開日2017-10-11
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.001 Å)
主引用文献Structural basis for binding and transfer of heme in bacterial heme-acquisition systems
Proteins, 85, 2017
5GIZ
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BU of 5giz by Molmil
Periplasmic heme-binding protein BhuT in apo form
分子名称: CHLORIDE ION, Putative hemin transport system, substrate-binding protein, ...
著者Nakamura, N, Naoe, Y, Rahman, M.M, Shiro, Y, Sugimoto, H.
登録日2016-06-26
公開日2017-06-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural basis for binding and transfer of heme in bacterial heme-acquisition systems.
Proteins, 85, 2017
1UE8
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BU of 1ue8 by Molmil
Crystal Structure of Thermophilic Cytochrome P450 from Sulfolobus tokodaii
分子名称: 367aa long hypothetical cytochrome P450, CHLORIDE ION, PROTOPORPHYRIN IX CONTAINING FE
著者Nakamura, N, Kamitori, S, Ohno, H.
登録日2003-05-09
公開日2004-07-13
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structure and direct electrochemistry of cytochrome P450 from the thermoacidophilic crenarchaeon, Sulfolobus tokodaii strain 7
J.Inorg.Biochem., 98, 2004
1C8I
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BU of 1c8i by Molmil
BINDING MODE OF HYDROXYLAMINE TO ARTHROMYCES RAMOSUS PEROXIDASE
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, HYDROXYAMINE, ...
著者Wariishi, H, Nonaka, D, Johjima, T, Nakamura, N, Naruta, Y, Kubo, K, Fukuyama, K.
登録日2000-05-08
公開日2001-01-17
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Direct binding of hydroxylamine to the heme iron of Arthromyces ramosus peroxidase. Substrate analogue that inhibits compound I formation in a competetive manner.
J.Biol.Chem., 275, 2000
5B58
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BU of 5b58 by Molmil
Inward-facing conformation of ABC heme importer BhuUV in complex with periplasmic heme binding protein BhuT from Burkholderia cenocepacia
分子名称: Hemin import ATP-binding protein HmuV, Putative hemin ABC transport system, membrane protein, ...
著者Naoe, Y, Nakamura, N, Doi, A, Shiro, Y, Sugimoto, H.
登録日2016-04-25
公開日2016-11-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.21 Å)
主引用文献Crystal structure of bacterial haem importer complex in the inward-facing conformation
Nat Commun, 7, 2016
5B57
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Inward-facing conformation of ABC heme importer BhuUV from Burkholderia cenocepacia
分子名称: DECYL-BETA-D-MALTOPYRANOSIDE, Hemin import ATP-binding protein HmuV, Putative hemin ABC transport system, ...
著者Naoe, Y, Nakamura, N, Doi, A, Shiro, Y, Sugimoto, H.
登録日2016-04-25
公開日2016-11-16
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of bacterial haem importer complex in the inward-facing conformation
Nat Commun, 7, 2016
8WDV
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BU of 8wdv by Molmil
Photosynthetic LH1-RC complex from the purple sulfur bacterium Allochromatium vinosum purified by Ca2+-DEAE
分子名称: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (2S)-3-hydroxypropane-1,2-diyl dihexadecanoate, Antenna complex alpha/beta subunit, ...
著者Tani, K, Kanno, R, Harada, A, Kobayashi, A, Minamino, A, Nakamura, N, Ji, X.-C, Purba, E.R, Hall, M, Yu, L.-J, Madigan, M.T, Mizoguchi, A, Iwasaki, K, Humbel, B.M, Kimura, Y, Wang-Otomo, Z.-Y.
登録日2023-09-16
公開日2024-02-21
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (2.24 Å)
主引用文献High-resolution structure and biochemical properties of the LH1-RC photocomplex from the model purple sulfur bacterium, Allochromatium vinosum.
Commun Biol, 7, 2024
8WDU
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BU of 8wdu by Molmil
Photosynthetic LH1-RC complex from the purple sulfur bacterium Allochromatium vinosum purified by sucrose density
分子名称: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (2S)-3-hydroxypropane-1,2-diyl dihexadecanoate, Antenna complex alpha/beta subunit, ...
著者Tani, K, Kanno, R, Harada, A, Kobayashi, A, Minamino, A, Nakamura, N, Ji, X.-C, Purba, E.R, Hall, M, Yu, L.-J, Madigan, M.T, Mizoguchi, A, Iwasaki, K, Humbel, B.M, Kimura, Y, Wang-Otomo, Z.-Y.
登録日2023-09-16
公開日2024-02-21
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (2.24 Å)
主引用文献High-resolution structure and biochemical properties of the LH1-RC photocomplex from the model purple sulfur bacterium, Allochromatium vinosum.
Commun Biol, 7, 2024
6JWF
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BU of 6jwf by Molmil
Holo form of Pyranose Dehydrogenase PQQ domain from Coprinopsis cinerea
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, ...
著者Takeda, K, Ishida, T, Yoshida, M, Samejima, M, Ohno, H, Igarashi, K, Nakamura, N.
登録日2019-04-20
公開日2019-11-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Crystal Structure of the Catalytic and CytochromebDomains in a Eukaryotic Pyrroloquinoline Quinone-Dependent Dehydrogenase.
Appl.Environ.Microbiol., 85, 2019
5Y89
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BU of 5y89 by Molmil
Periplasmic heme-binding protein BhuT in complex with one heme (holo-1)
分子名称: ACETATE ION, PROTOPORPHYRIN IX CONTAINING FE, Putative hemin transport system, ...
著者Naoe, Y, Nakamura, N, Rahman, M.M, Shiro, Y, Sugimoto, H.
登録日2017-08-20
公開日2017-10-11
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis for binding and transfer of heme in bacterial heme-acquisition systems
Proteins, 85, 2017
5Y8B
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BU of 5y8b by Molmil
Periplasmic heme-binding protein RhuT from Roseiflexus sp. RS-1 in apo form
分子名称: MAGNESIUM ION, Periplasmic binding protein
著者Rahman, M.M, Naoe, Y, Nakamura, N, Doi, A, Shiro, Y, Sugimoto, H.
登録日2017-08-20
公開日2017-10-11
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis for binding and transfer of heme in bacterial heme-acquisition systems
Proteins, 85, 2017
5GJ3
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BU of 5gj3 by Molmil
Periplasmic heme-binding protein RhuT from Roseiflexus sp. RS-1 in two-heme bound form (holo-2)
分子名称: PROTOPORPHYRIN IX CONTAINING FE, Periplasmic binding protein, ZINC ION
著者Rahman, M.M, Naoe, Y, Nakamura, N, Shiro, Y, Sugimoto, H.
登録日2016-06-26
公開日2017-06-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis for binding and transfer of heme in bacterial heme-acquisition systems.
Proteins, 85, 2017
6JT5
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BU of 6jt5 by Molmil
Crystal structure of PQQ doamin of Pyranose Dehydrogenase from Coprinopsis cinerea: apo-from
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Extracellular PQQ-dependent sugar dehydrogenase, ...
著者Takeda, K, Ishida, T, Yoshida, M, Samejima, M, Ohno, H, Igarashi, K, Nakamura, N.
登録日2019-04-09
公開日2019-11-06
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal Structure of the Catalytic and CytochromebDomains in a Eukaryotic Pyrroloquinoline Quinone-Dependent Dehydrogenase.
Appl.Environ.Microbiol., 85, 2019
6JT6
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BU of 6jt6 by Molmil
Crystal structure of cytochrome b domain of Pyranose Dehydrogenase from Coprinopsis cinerea
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, ...
著者Takeda, K, Ishida, T, Yoshida, M, Samejima, M, Ohno, H, Igarashi, K, Nakamura, N.
登録日2019-04-09
公開日2019-11-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of the Catalytic and CytochromebDomains in a Eukaryotic Pyrroloquinoline Quinone-Dependent Dehydrogenase.
Appl.Environ.Microbiol., 85, 2019
3B4X
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BU of 3b4x by Molmil
Crystal Structure Analysis of Sulfolobus tokodaii strain7 cytochrom P450
分子名称: 367aa long hypothetical cytochrome P450, PROTOPORPHYRIN IX CONTAINING FE
著者Kamitori, S, Yoshida, H, Ohtaki, A, Nakamura, N.
登録日2007-10-24
公開日2008-11-04
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Monooxygenation by Thermophilic Cytochrome P450 via Direct Electron Transfer from NADH without Redox Partner
To be Published

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件を2024-10-09に公開中

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