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PDB: 429 件
1A3S
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BU of 1a3s by Molmil
HUMAN UBC9
分子名称: UBC9
著者Naismith, J.H, Giraud, M.
登録日1998-01-23
公開日1998-05-27
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of ubiquitin-conjugating enzyme 9 displays significant differences with other ubiquitin-conjugating enzymes which may reflect its specificity for sumo rather than ubiquitin.
Acta Crystallogr.,Sect.D, 54, 1998
6ENK
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BU of 6enk by Molmil
The X-ray crystal structure of DesE bound to desferrioxamine B
分子名称: DesE, SODIUM ION, desferrioxamine B
著者Naismith, J.H, McMahon, S.A, Challis, G.L, Kadi, N, Oke, M, Liu, H, Carter, L.G, Johnson, K.A.
登録日2017-10-05
公開日2018-05-02
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Desferrioxamine biosynthesis: diverse hydroxamate assembly by substrate-tolerant acyl transferase DesC.
Philos. Trans. R. Soc. Lond., B, Biol. Sci., 373, 2018
1CON
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BU of 1con by Molmil
THE REFINED STRUCTURE OF CADMIUM SUBSTITUTED CONCANAVALIN A AT 2.0 ANGSTROMS RESOLUTION
分子名称: CADMIUM ION, CALCIUM ION, CONCANAVALIN A
著者Naismith, J.H, Habash, J, Harrop, S.J, Helliwell, J.R, Hunter, W.N, Kalb(Gilboa), A.J, Yariv, J, Wan, T.C.M, Weisgerber, S.
登録日1993-03-16
公開日1994-01-31
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Refined structure of cadmium-substituted concanavalin A at 2.0 A resolution.
Acta Crystallogr.,Sect.D, 49, 1993
1NCF
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BU of 1ncf by Molmil
A NEW PARADIGM FOR TUMOR NECROSIS FACTOR SIGNALLING
分子名称: TUMOR NECROSIS FACTOR RECEPTOR
著者Naismith, J.H, Sprang, S.R.
登録日1994-10-12
公開日1995-12-07
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystallographic evidence for dimerization of unliganded tumor necrosis factor receptor.
J.Biol.Chem., 270, 1995
6SSD
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BU of 6ssd by Molmil
Transaminase with PLP bound
分子名称: ForI-PLP, PYRIDOXAL-5'-PHOSPHATE, SULFATE ION
著者Naismith, J.H, Gao, S.
登録日2019-09-06
公開日2020-01-15
実験手法X-RAY DIFFRACTION (1.18 Å)
主引用文献PMP-diketopiperazine adducts form at the active site of a PLP dependent enzyme involved in formycin biosynthesis.
Chem.Commun.(Camb.), 55, 2019
6SIY
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BU of 6siy by Molmil
PaaK family AMP-ligase with AMP and substrate
分子名称: 1,2-ETHANEDIOL, 3-HYDROXYANTHRANILIC ACID, ADENOSINE MONOPHOSPHATE, ...
著者Naismith, J.H, Song, H.
登録日2019-08-12
公開日2020-01-15
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献The Biosynthesis of the Benzoxazole in Nataxazole Proceeds via an Unstable Ester and has Synthetic Utility.
Angew.Chem.Int.Ed.Engl., 59, 2020
6SJ0
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BU of 6sj0 by Molmil
Amidohydrolase, AHS
分子名称: Amidohydrolase, BICARBONATE ION, DI(HYDROXYETHYL)ETHER, ...
著者Naismith, J.H, Song, H.
登録日2019-08-12
公開日2020-01-15
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献The Biosynthesis of the Benzoxazole in Nataxazole Proceeds via an Unstable Ester and has Synthetic Utility.
Angew.Chem.Int.Ed.Engl., 59, 2020
6SIX
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BU of 6six by Molmil
PaaK family AMP-ligase with ANP
分子名称: 1,2-ETHANEDIOL, AMP-dependent synthetase and ligase, CITRATE ANION, ...
著者Naismith, J.H, Song, H.
登録日2019-08-12
公開日2020-01-15
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献The Biosynthesis of the Benzoxazole in Nataxazole Proceeds via an Unstable Ester and has Synthetic Utility.
Angew.Chem.Int.Ed.Engl., 59, 2020
6SJ4
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BU of 6sj4 by Molmil
Amidohydrolase, AHS with substrate analog
分子名称: 1,2-ETHANEDIOL, 3-(3-hydroxyphenyl)carbonyloxybenzoic acid, Amidohydrolase, ...
著者Naismith, J.H, Song, H.
登録日2019-08-12
公開日2020-01-15
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献The Biosynthesis of the Benzoxazole in Nataxazole Proceeds via an Unstable Ester and has Synthetic Utility.
Angew.Chem.Int.Ed.Engl., 59, 2020
6TM4
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BU of 6tm4 by Molmil
NatL2 in complex with two molecules of salicylic acid
分子名称: 2-HYDROXYBENZOIC ACID, ADENOSINE MONOPHOSPHATE, MAGNESIUM ION, ...
著者Naismith, J.H, Song, H.
登録日2019-12-03
公開日2020-01-15
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献The Biosynthesis of the Benzoxazole in Nataxazole Proceeds via an Unstable Ester and has Synthetic Utility.
Angew.Chem.Int.Ed.Engl., 59, 2020
5N0O
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BU of 5n0o by Molmil
Crystal structure of Seleno-OphA-DeltaC18 in complex with SAM
分子名称: 1,2-ETHANEDIOL, L-HOMOSERINE, Peptide N-methyltransferase, ...
著者Naismith, J.H, Song, H.
登録日2017-02-03
公開日2018-02-14
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献A molecular mechanism for the enzymatic methylation of nitrogen atoms within peptide bonds.
Sci Adv, 4, 2018
6ZH9
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BU of 6zh9 by Molmil
Ternary complex CR3022 H11-H4 and RBD (SARS-CoV-2)
分子名称: CR3022 Light chain, CR3022 heavy, Nanobody H11-H4, ...
著者Naismith, J.H, Mikolajek, H, Le Bas, A.
登録日2020-06-21
公開日2020-09-02
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.31 Å)
主引用文献Neutralizing nanobodies bind SARS-CoV-2 spike RBD and block interaction with ACE2.
Nat.Struct.Mol.Biol., 27, 2020
6FI2
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BU of 6fi2 by Molmil
VexL: A periplasmic depolymerase provides new insight into ABC transporter-dependent secretion of bacterial capsular polysaccharides
分子名称: 2-acetamido-2-deoxy-alpha-D-galactopyranuronic acid-(1-4)-3-O-acetyl-2-acetamido-2-deoxy-alpha-D-galactopyranuronic acid-(1-4)-3-O-acetyl-2-acetamido-2-deoxy-alpha-D-galactopyranuronic acid, MALONATE ION, VexL
著者Naismith, J.H, McMahon, S.A, Le Bas, A, Liston, S.D, Whitfield, C.
登録日2018-01-16
公開日2018-05-02
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.22 Å)
主引用文献Periplasmic depolymerase provides insight into ABC transporter-dependent secretion of bacterial capsular polysaccharides.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6SSG
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BU of 6ssg by Molmil
Transaminase with DCS bound
分子名称: ForI-DCS, SULFATE ION, [4-[(~{Z})-[(2~{R},5~{R})-5-(azanyloxymethyl)-3,6-bis(oxidanylidene)piperazin-2-yl]methoxyiminomethyl]-6-methyl-5-oxidanyl-pyridin-3-yl]methyl dihydrogen phosphate
著者Naismith, J.H, Gao, S.
登録日2019-09-06
公開日2020-01-15
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献PMP-diketopiperazine adducts form at the active site of a PLP dependent enzyme involved in formycin biosynthesis.
Chem.Commun.(Camb.), 55, 2019
6SSE
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BU of 6sse by Molmil
Transaminase with PMP bound
分子名称: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, ForI-PMP, SULFATE ION
著者Naismith, J.H, Gao, S.
登録日2019-09-06
公開日2020-01-15
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献PMP-diketopiperazine adducts form at the active site of a PLP dependent enzyme involved in formycin biosynthesis.
Chem.Commun.(Camb.), 55, 2019
1DZT
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BU of 1dzt by Molmil
RMLC FROM SALMONELLA TYPHIMURIUM
分子名称: 3'-O-ACETYLTHYMIDINE-(5' DIPHOSPHATE PHENYL ESTER), 3'-O-ACETYLTHYMIDINE-5'-DIPHOSPHATE, DTDP-4-DEHYDRORHAMNOSE 3,5-EPIMERASE, ...
著者Naismith, J.H, Giraud, M.F.
登録日2000-03-07
公開日2000-04-18
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Rmlc, the Third Enzyme of Dtdp-L-Rhamnose Pathway, is a New Class of Epimerase.
Nat.Struct.Biol., 7, 2000
1DZR
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BU of 1dzr by Molmil
RmlC from Salmonella typhimurium
分子名称: DTDP-4-DEHYDRORHAMNOSE 3,5-EPIMERASE, GLYCEROL, SULFATE ION
著者Naismith, J.H, Giraud, M.F.
登録日2000-03-07
公開日2000-04-18
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献Rmlc, the Third Enzyme of Dtdp-L-Rhamnose Pathway, is a New Class of Epimerase.
Nat.Struct.Biol., 7, 2000
6YZ5
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BU of 6yz5 by Molmil
H11-D4 complex with SARS-CoV-2 RBD
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, ...
著者Naismith, J.H, Huo, J, Mikolajek, H, Ward, P, Dumoux, M, Owens, R.J, Le Bas, A.
登録日2020-05-06
公開日2020-06-03
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献H11-D4 complex with SARS-CoV-2 RBD
To Be Published
6Z3C
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BU of 6z3c by Molmil
High resolution structure of RgNanOx
分子名称: CITRATE ANION, Gfo/Idh/MocA family oxidoreductase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Naismith, J.H, Lee, M.O.
登録日2020-05-19
公開日2020-06-03
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Uncovering a novel molecular mechanism for scavenging sialic acids in bacteria.
J.Biol.Chem., 295, 2020
6Z3B
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BU of 6z3b by Molmil
Low resolution structure of RgNanOx
分子名称: CITRIC ACID, Gfo/Idh/MocA family oxidoreductase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Naismith, J.H, Lee, M.
登録日2020-05-19
公開日2020-07-22
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.58 Å)
主引用文献Uncovering a novel molecular mechanism for scavenging sialic acids in bacteria.
J.Biol.Chem., 295, 2020
6SJ2
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BU of 6sj2 by Molmil
Amidohydrolase, AHS with 3-HAA
分子名称: 3-HYDROXYANTHRANILIC ACID, Amidohydrolase, GLYCEROL, ...
著者Naismith, J.H, Song, H.
登録日2019-08-12
公開日2020-01-15
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献The Biosynthesis of the Benzoxazole in Nataxazole Proceeds via an Unstable Ester and has Synthetic Utility.
Angew.Chem.Int.Ed.Engl., 59, 2020
6SIW
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BU of 6siw by Molmil
PaaK family AMP-ligase with AMP
分子名称: 1,2-ETHANEDIOL, 2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHANOL, ADENOSINE MONOPHOSPHATE, ...
著者Naismith, J.H, Song, H.
登録日2019-08-12
公開日2020-01-15
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献The Biosynthesis of the Benzoxazole in Nataxazole Proceeds via an Unstable Ester and has Synthetic Utility.
Angew.Chem.Int.Ed.Engl., 59, 2020
6SIZ
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BU of 6siz by Molmil
PaaK family AMP-ligase with ANP and substrate
分子名称: 1,2-ETHANEDIOL, 3-HYDROXYANTHRANILIC ACID, AMP-dependent synthetase and ligase, ...
著者Naismith, J.H, Song, H.
登録日2019-08-12
公開日2020-01-15
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献The Biosynthesis of the Benzoxazole in Nataxazole Proceeds via an Unstable Ester and has Synthetic Utility.
Angew.Chem.Int.Ed.Engl., 59, 2020
6SJ3
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BU of 6sj3 by Molmil
Amidohydrolase, AHS with 3-HBA
分子名称: 1,2-ETHANEDIOL, 3-HYDROXYBENZOIC ACID, Amidohydrolase, ...
著者Naismith, J.H, Song, H.
登録日2019-08-12
公開日2020-01-15
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.17 Å)
主引用文献The Biosynthesis of the Benzoxazole in Nataxazole Proceeds via an Unstable Ester and has Synthetic Utility.
Angew.Chem.Int.Ed.Engl., 59, 2020
6Z2M
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BU of 6z2m by Molmil
H11-D4, SARS-CoV-2 RBD, CR3022 ternary complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CR3022 antibody, Spike glycoprotein, ...
著者Naismith, J.H, Ren, J, Zhou, D, Zhao, Y, Stuart, D.I.
登録日2020-05-17
公開日2020-06-03
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.71 Å)
主引用文献Structural characterisation of a nanobody derived from a naive library that neutralises SARS-CoV-2
To Be Published

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