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PDB: 278 results

3T00
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Crystal Structure of Phosphonoacetate hydrolase from Sinorhizobium meliloti 1021 in complex with vanadate
Descriptor: NICKEL (II) ION, VANADATE ION, ZINC ION, ...
Authors:Agarwal, V, Nair, S.K.
Deposit date:2011-07-19
Release date:2011-08-03
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and mechanistic insights into C-p bond hydrolysis by phosphonoacetate hydrolase.
Chem.Biol., 18, 2011
3TLY
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Microcin C7 self immunity protein MccF active site mutant S118A/N220A/K247A in the apo state
Descriptor: 1,2-ETHANEDIOL, MccF
Authors:Agarwal, V, Nair, S.K.
Deposit date:2011-08-30
Release date:2012-02-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure and function of a serine carboxypeptidase adapted for degradation of the protein synthesis antibiotic microcin C7.
Proc.Natl.Acad.Sci.USA, 109, 2012
3TLE
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Microcin C7 self immunity protein MccF in complex with glutamyl sulfamoyl adenylate
Descriptor: 1,2-ETHANEDIOL, MccF, O5'-(L-GLUTAMYL-SULFAMOYL)-ADENOSINE
Authors:Agarwal, V, Nair, S.K.
Deposit date:2011-08-29
Release date:2012-02-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structure and function of a serine carboxypeptidase adapted for degradation of the protein synthesis antibiotic microcin C7.
Proc.Natl.Acad.Sci.USA, 109, 2012
3UQ4
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X-ray structure of a pentameric ligand gated ion channel from Erwinia chrysanthemi (ELIC) mutant F247L (F16L)
Descriptor: Gamma-aminobutyric-acid receptor subunit beta-1, SODIUM ION
Authors:Gonzalez-Gutierrez, G, Lukk, T, Agarwal, V, Papke, D, Nair, S.K, Grosman, C.
Deposit date:2011-11-19
Release date:2012-04-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Mutations that stabilize the open state of the Erwinia chrisanthemi ligand-gated ion channel fail to change the conformation of the pore domain in crystals.
Proc.Natl.Acad.Sci.USA, 109, 2012
3UQ5
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X-ray structure of a pentameric ligand gated ion channel from Erwinia chrysanthemi (ELIC) mutant L240A F247L (L9A F16L) in the presence of 10 mM cysteamine
Descriptor: Gamma-aminobutyric-acid receptor subunit beta-1, SODIUM ION
Authors:Gonzalez-Gutierrez, G, Lukk, T, Agarwal, V, Papke, D, Nair, S.K, Grosman, C.
Deposit date:2011-11-19
Release date:2012-04-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (4.2 Å)
Cite:Mutations that stabilize the open state of the Erwinia chrisanthemi ligand-gated ion channel fail to change the conformation of the pore domain in crystals.
Proc.Natl.Acad.Sci.USA, 109, 2012
3UQ7
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X-ray structure of a pentameric ligand gated ion channel from Erwinia chrysanthemi (ELIC) mutant L240S F247L (L9S F16L) in presence of 10 mM cysteamine
Descriptor: Gamma-aminobutyric-acid receptor subunit beta-1
Authors:Gonzalez-Gutierrez, G, Lukk, T, Agarwal, V, Papke, D, Nair, S.K, Grosman, C.
Deposit date:2011-11-19
Release date:2012-04-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Mutations that stabilize the open state of the Erwinia chrisanthemi ligand-gated ion channel fail to change the conformation of the pore domain in crystals.
Proc.Natl.Acad.Sci.USA, 109, 2012
3IX4
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LasR-TP1 complex
Descriptor: 2,4-dibromo-6-({[(2-nitrophenyl)carbonyl]amino}methyl)phenyl 2-chlorobenzoate, Transcriptional activator protein lasR
Authors:Zou, Y, Nair, S.K.
Deposit date:2009-09-03
Release date:2009-09-15
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Molecular basis for the recognition of structurally distinct autoinducer mimics by the Pseudomonas aeruginosa LasR quorum-sensing signaling receptor.
Chem.Biol., 16, 2009
3IX8
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LasR-TP3 complex
Descriptor: 2,4-dibromo-6-({[(2-chlorophenyl)carbonyl]amino}methyl)phenyl 2-methylbenzoate, Transcriptional activator protein lasR
Authors:Zou, Y, Nair, S.K.
Deposit date:2009-09-03
Release date:2009-09-15
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Molecular basis for the recognition of structurally distinct autoinducer mimics by the Pseudomonas aeruginosa LasR quorum-sensing signaling receptor.
Chem.Biol., 16, 2009
3JPU
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LasR-TP4 complex
Descriptor: 4-bromo-2-({[(2-chlorophenyl)carbonyl]amino}methyl)-6-methylphenyl 2,4-dichlorobenzoate, Transcriptional activator protein lasR
Authors:Zou, Y, Nair, S.K.
Deposit date:2009-09-04
Release date:2009-10-13
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Molecular basis for the recognition of structurally distinct autoinducer mimics by the Pseudomonas aeruginosa LasR quorum-sensing signaling receptor.
Chem.Biol., 16, 2009
3IX3
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BU of 3ix3 by Molmil
LasR-OC12 HSL complex
Descriptor: N-3-OXO-DODECANOYL-L-HOMOSERINE LACTONE, Transcriptional activator protein lasR
Authors:Zou, Y, Nair, S.K.
Deposit date:2009-09-03
Release date:2009-09-15
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:LasR-OC12 HSL complex
TO BE PUBLISHED
3M6I
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L-arabinitol 4-dehydrogenase
Descriptor: L-arabinitol 4-dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ZINC ION
Authors:Bae, B, Nair, S.K.
Deposit date:2010-03-15
Release date:2010-07-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure and engineering of L-arabinitol 4-dehydrogenase from Neurospora crassa
J.Mol.Biol., 402, 2010
3OEA
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Crystal structure of the Q121E mutants of C.polysaccharolyticus CBM16-1 bound to cellopentaose
Descriptor: CALCIUM ION, S-layer associated multidomain endoglucanase, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Agarwal, V, Nair, S.K.
Deposit date:2010-08-12
Release date:2010-08-25
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Mutational insights into the roles of amino acid residues in ligand binding for two closely related family 16 carbohydrate binding modules.
J.Biol.Chem., 285, 2010
3OU6
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DhpI-SAM complex
Descriptor: S-ADENOSYLMETHIONINE, SAM-dependent methyltransferase, SULFATE ION
Authors:Bae, B, Nair, S.K.
Deposit date:2010-09-14
Release date:2010-10-27
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Characterization and structure of DhpI, a phosphonate O-methyltransferase involved in dehydrophos biosynthesis.
Proc.Natl.Acad.Sci.USA, 107, 2010
3OO3
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Crystal Structure of the Orf6* (CYP165D3) Monooxygenase Involved in Teicoplanin Biosynthesis
Descriptor: Oxy protein, PROTOPORPHYRIN IX CONTAINING FE
Authors:Li, Z, Nair, S.K.
Deposit date:2010-08-30
Release date:2011-01-05
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of a phenol-coupling P450 monooxygenase involved in teicoplanin biosynthesis.
Proteins, 79, 2011
3Q4D
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BU of 3q4d by Molmil
Crystal structure of dipeptide epimerase from Cytophaga hutchinsonii complexed with Mg and dipeptide D-Ala-L-Ala
Descriptor: ALANINE, D-ALANINE, MAGNESIUM ION, ...
Authors:Lukk, T, Gerlt, J.A, Nair, S.K.
Deposit date:2010-12-23
Release date:2011-02-16
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Homology models guide discovery of diverse enzyme specificities among dipeptide epimerases in the enolase superfamily.
Proc.Natl.Acad.Sci.USA, 109, 2012
3OU7
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BU of 3ou7 by Molmil
DhpI-SAM-HEP complex
Descriptor: (2-hydroxyethyl)phosphonic acid, S-ADENOSYLMETHIONINE, SAM-dependent methyltransferase, ...
Authors:Bae, B, Nair, S.K.
Deposit date:2010-09-14
Release date:2010-10-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Characterization and structure of DhpI, a phosphonate O-methyltransferase involved in dehydrophos biosynthesis.
Proc.Natl.Acad.Sci.USA, 107, 2010
3Q45
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Crystal structure of Dipeptide Epimerase from Cytophaga hutchinsonii complexed with Mg and dipeptide D-Ala-L-Val
Descriptor: D-ALANINE, MAGNESIUM ION, Mandelate racemase/muconate lactonizing enzyme family; possible chloromuconate cycloisomerase, ...
Authors:Lukk, T, Gerlt, J.A, Nair, S.K.
Deposit date:2010-12-22
Release date:2011-02-16
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Homology models guide discovery of diverse enzyme specificities among dipeptide epimerases in the enolase superfamily.
Proc.Natl.Acad.Sci.USA, 109, 2012
3OEB
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BU of 3oeb by Molmil
Crystal structure of the Q121E mutant of C.polysaccharolyticus CBM16-1 bound to mannopentaose
Descriptor: CALCIUM ION, S-layer associated multidomain endoglucanase, SULFATE ION, ...
Authors:Agarwal, V, Nair, S.K.
Deposit date:2010-08-12
Release date:2010-08-25
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Mutational insights into the roles of amino acid residues in ligand binding for two closely related family 16 carbohydrate binding modules.
J.Biol.Chem., 285, 2010
3OU2
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DhpI-SAH complex structure
Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, SAM-dependent methyltransferase
Authors:Bae, B, Nair, S.K.
Deposit date:2010-09-14
Release date:2010-10-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Characterization and structure of DhpI, a phosphonate O-methyltransferase involved in dehydrophos biosynthesis.
Proc.Natl.Acad.Sci.USA, 107, 2010
3EUO
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BU of 3euo by Molmil
crystal structure of a fungal type III polyketide synthase, ORAS
Descriptor: Type III Pentaketide Synthase
Authors:Zhang, H, Brunzelle, J.S, Nair, S.K.
Deposit date:2008-10-10
Release date:2008-11-04
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Distinct Structural Elements Dictate the Specificity of the Type III Pentaketide Synthase from Neurospora crassa.
Chem.Biol., 15, 2008
3EUQ
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X-ray structural of a type III pentaketide synthase from Neurospora crassa
Descriptor: HEXAETHYLENE GLYCOL, Putative uncharacterized protein
Authors:Zhang, H, Brunzelle, J.S, Nair, S.K.
Deposit date:2008-10-10
Release date:2008-11-11
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Distinct Structural Elements Dictate the Specificity of the Type III Pentaketide Synthase from Neurospora crassa.
Chem.Biol., 15, 2008
3F8T
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BU of 3f8t by Molmil
Crystal structure analysis of a full-length MCM homolog from Methanopyrus kandleri
Descriptor: Predicted ATPase involved in replication control, Cdc46/Mcm family
Authors:Bae, B, Nair, S.K.
Deposit date:2008-11-13
Release date:2009-03-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Insights into the Architecture of the Replicative Helicase from the Structure of an Archaeal MCM Homolog.
Structure, 17, 2009
3GBF
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BU of 3gbf by Molmil
Phpd with cadmium complexed with hydroethylphosphonate (HEP)
Descriptor: (2-hydroxyethyl)phosphonic acid, CADMIUM ION, PhpD
Authors:Zhang, H, Nair, S.K.
Deposit date:2009-02-19
Release date:2009-06-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:An Unusual Carbon-Carbon Bond Cleavage Reaction in the Biosynthesis of the Herbicide Phosphinothricin
To be Published
3DFM
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BU of 3dfm by Molmil
The crystal structure of the zinc inhibited form of teicoplanin deacetylase Orf2
Descriptor: SULFATE ION, TEICOPLANIN PSEUDOAGLYCONE DEACETYLASE ORF2, ZINC ION
Authors:Zou, Y, Brunzelle, J.S, Nair, S.K.
Deposit date:2008-06-12
Release date:2008-07-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Crystal structures of lipoglycopeptide antibiotic deacetylases: implications for the biosynthesis of a40926 and teicoplanin.
Chem.Biol., 15, 2008
3EUT
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BU of 3eut by Molmil
X-ray crystal structure of a type III pentaketide synthase from Neurospora crassa
Descriptor: Putative uncharacterized protein, icosanoic acid
Authors:Zhang, H, Brunzelle, J.S, Nair, S.K.
Deposit date:2008-10-10
Release date:2008-11-11
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Distinct Structural Elements Dictate the Specificity of the Type III Pentaketide Synthase from Neurospora crassa.
Chem.Biol., 15, 2008

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