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PDB: 278 results
4IL2
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BU of 4il2 by Molmil
Crystal structure of D-mannonate dehydratase (rspA) from E. coli CFT073 (EFI TARGET EFI-501585)
Descriptor: MAGNESIUM ION, Starvation sensing protein rspA
Authors:Lukk, T, Wichelecki, D, Imker, H.J, Gerlt, J.A, Nair, S.K.
Deposit date:2012-12-28
Release date:2013-02-20
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Mannonate degradation pathway in E. coli CFT073
To be Published
4GS1
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BU of 4gs1 by Molmil
Crystal structure of DyP-type peroxidase from Thermobifida cellulosilytica
Descriptor: DyP-type peroxidase, GLYCEROL, OXYGEN MOLECULE, ...
Authors:Lukk, T, Hetta, A.M.A, Jones, A, Solbiati, J, Majumdar, S, Cronan, J.E, Gerlt, J.A, Nair, S.K.
Deposit date:2012-08-27
Release date:2013-09-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:DyP-type peroxidases from Stretptomyces and Thermobifida can modify organosolv lignin.
To be Published
4GU7
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BU of 4gu7 by Molmil
Crystal structure of DyP-type peroxidase (SCO7193) from Streptomyces coelicolor
Descriptor: NICKEL (II) ION, PROTOPORPHYRIN IX CONTAINING FE, Putative uncharacterized protein SCO7193
Authors:Lukk, T, Hetta, A.M.A, Jones, A, Solbiati, J, Majumdar, S, Cronan, J.E, Gerlt, J.A, Nair, S.K.
Deposit date:2012-08-29
Release date:2013-09-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:DyP-type peroxidases from Stretptomyces and Thermobifida can modify organosolv lignin.
To be Published
4K8G
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BU of 4k8g by Molmil
Crystal structure of D-Mannonate dehydratase from Novosphingobium aromaticivorans mutant (V161A, R163A, K165G, L166A, Y167G, Y168A, E169G)
Descriptor: GLYCEROL, MAGNESIUM ION, Mandelate racemase/muconate lactonizing enzyme, ...
Authors:Lukk, T, Wichelecki, D, Gerlt, J.A, Nair, S.K.
Deposit date:2013-04-18
Release date:2013-05-22
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Crystal structure of D-Mannonate dehydratase from Novosphingobium aromaticivorans mutant (V161A, R163A, K165G, L166A, Y167G, Y168A, E169G)
To be Published
4KWC
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BU of 4kwc by Molmil
Structure of the plantazolicin methyltransferase BpumL in complex with SAH
Descriptor: BpumL, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Hao, Y, Nair, S.K.
Deposit date:2013-05-23
Release date:2013-07-24
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.994 Å)
Cite:Structural and functional insight into an unexpectedly selective N-methyltransferase involved in plantazolicin biosynthesis.
Proc.Natl.Acad.Sci.USA, 110, 2013
4KV4
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BU of 4kv4 by Molmil
Brd4 Bromodomain 2 in Complex with Acetylated Rel Peptide
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, Bromodomain-containing protein 4, Rel Peptide
Authors:Zhang, H, Nair, S.K.
Deposit date:2013-05-22
Release date:2013-06-26
Last modified:2014-05-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Brd4 maintains constitutively active NF-kappa B in cancer cells by binding to acetylated RelA.
Oncogene, 33, 2014
4KV1
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BU of 4kv1 by Molmil
Crystal Structure of Brd4 Bromodomain 1 in Complex with Acetylated Rel Peptide
Descriptor: Bromodomain-containing protein 4, Rel peptide
Authors:Zhang, H, Nair, S.K.
Deposit date:2013-05-22
Release date:2013-06-26
Last modified:2014-05-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Brd4 maintains constitutively active NF-kappa B in cancer cells by binding to acetylated RelA.
Oncogene, 33, 2014
3RO6
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BU of 3ro6 by Molmil
Crystal structure of Dipeptide Epimerase from Methylococcus capsulatus complexed with Mg ion
Descriptor: GLYCEROL, MAGNESIUM ION, Putative chloromuconate cycloisomerase, ...
Authors:Lukk, T, Sakai, A, Song, L, Gerlt, J.A, Nair, S.K.
Deposit date:2011-04-25
Release date:2011-05-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Homology models guide discovery of diverse enzyme specificities among dipeptide epimerases in the enolase superfamily.
Proc.Natl.Acad.Sci.USA, 109, 2012
3T02
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BU of 3t02 by Molmil
Crystal Structure of Phosphonoacetate hydrolase from Sinorhizobium meliloti 1021 in complex with Phosphonoacetate
Descriptor: PHOSPHONOACETIC ACID, ZINC ION, phosphonoacetate hydrolase
Authors:Agarwal, V, Nair, S.K.
Deposit date:2011-07-19
Release date:2011-08-03
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and mechanistic insights into C-p bond hydrolysis by phosphonoacetate hydrolase.
Chem.Biol., 18, 2011
3T9W
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BU of 3t9w by Molmil
Small laccase from Amycolatopsis sp. ATCC 39116
Descriptor: COPPER (II) ION, HYDROGEN PEROXIDE, NICKEL (II) ION, ...
Authors:Lukk, T, Majumdar, S, Gerlt, J.A, Nair, S.K.
Deposit date:2011-08-03
Release date:2012-08-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Roles of small laccases from Streptomyces in lignin degradation.
Biochemistry, 53, 2014
3TAS
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BU of 3tas by Molmil
Small laccase from Streptomyces viridosporus T7A
Descriptor: ACETATE ION, COPPER (II) ION, OXYGEN MOLECULE, ...
Authors:Lukk, T, Majumdar, S, Gerlt, J.A, Nair, S.K.
Deposit date:2011-08-04
Release date:2012-08-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Roles of small laccases from Streptomyces in lignin degradation.
Biochemistry, 53, 2014
3TA4
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BU of 3ta4 by Molmil
Small laccase from Amycolatopsis sp. ATCC 39116 complexed with 1-(3,4-dimethoxyphenyl)-2-(2-methoxyphenoxy)-1,3-dihydroxypropane
Descriptor: (1R,2S)-1-(3,4-dimethoxyphenyl)-2-(2-methoxyphenoxy)propane-1,3-diol, COPPER (II) ION, small laccase, ...
Authors:Lukk, T, Majumdar, S, Gerlt, J.A, Nair, S.K.
Deposit date:2011-08-03
Release date:2012-09-12
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Roles of small laccases from Streptomyces in lignin degradation.
Biochemistry, 53, 2014
3SZZ
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BU of 3szz by Molmil
Crystal Structure of Phosphonoacetate hydrolase from Sinorhizobium meliloti 1021 in complex with Acetate
Descriptor: ACETATE ION, ZINC ION, phosphonoacetate hydrolase
Authors:Agarwal, V, Nair, S.K.
Deposit date:2011-07-19
Release date:2011-08-03
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and mechanistic insights into C-p bond hydrolysis by phosphonoacetate hydrolase.
Chem.Biol., 18, 2011
3TBC
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BU of 3tbc by Molmil
Small laccase from Streptomyces viridosporus T7A; alternate crystal form complexed with acetovanillone.
Descriptor: 1-(4-hydroxy-3-methoxyphenyl)ethanone, COPPER (II) ION, OXYGEN MOLECULE, ...
Authors:Lukk, T, Majumdar, S, Gerlt, J.A, Nair, S.K.
Deposit date:2011-08-05
Release date:2012-08-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Roles of small laccases from Streptomyces in lignin degradation.
Biochemistry, 53, 2014
3TBB
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BU of 3tbb by Molmil
Small laccase from Streptomyces viridosporus T7A; alternate crystal form.
Descriptor: COPPER (II) ION, OXYGEN MOLECULE, PHOSPHATE ION, ...
Authors:Lukk, T, Majumdar, S, Gerlt, J.A, Nair, S.K.
Deposit date:2011-08-05
Release date:2012-08-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Roles of small laccases from Streptomyces in lignin degradation.
Biochemistry, 53, 2014
3TLG
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BU of 3tlg by Molmil
Microcin C7 self immunity protein MccF in the inactive mutant APO state
Descriptor: MccF
Authors:Agarwal, V, Nair, S.K.
Deposit date:2011-08-29
Release date:2012-02-29
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (1.4993 Å)
Cite:Structure and function of a serine carboxypeptidase adapted for degradation of the protein synthesis antibiotic microcin C7.
Proc.Natl.Acad.Sci.USA, 109, 2012
3TLC
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BU of 3tlc by Molmil
Microcin C7 self immunity protein MccF in complex with Microcin C7 antibiotic
Descriptor: 1,2-ETHANEDIOL, 5'-O-[(R)-(3-aminopropoxy)(L-alpha-aspartylamino)phosphoryl]adenosine, MccF
Authors:Agarwal, V, Nair, S.K.
Deposit date:2011-08-29
Release date:2012-02-29
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structure and function of a serine carboxypeptidase adapted for degradation of the protein synthesis antibiotic microcin C7.
Proc.Natl.Acad.Sci.USA, 109, 2012
3TLB
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BU of 3tlb by Molmil
Microcin C7 self immunity protein MccF in complex aspartyl sulfamoyl adenosine
Descriptor: 5'-O-(L-alpha-aspartylsulfamoyl)adenosine, MccF
Authors:Agarwal, V, Nair, S.K.
Deposit date:2011-08-29
Release date:2012-02-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.501 Å)
Cite:Structure and function of a serine carboxypeptidase adapted for degradation of the protein synthesis antibiotic microcin C7.
Proc.Natl.Acad.Sci.USA, 109, 2012
3TLA
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BU of 3tla by Molmil
Microcin C7 self immunity protein MccF in the wild type APO state
Descriptor: 1,2-ETHANEDIOL, MccF
Authors:Agarwal, V, Nair, S.K.
Deposit date:2011-08-29
Release date:2012-02-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.201 Å)
Cite:Structure and function of a serine carboxypeptidase adapted for degradation of the protein synthesis antibiotic microcin C7.
Proc.Natl.Acad.Sci.USA, 109, 2012
3TLZ
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BU of 3tlz by Molmil
Microcin C7 self immunity protein MccF mutant W186F in complex with Adenosine Monophosphate
Descriptor: 1,2-ETHANEDIOL, ADENOSINE MONOPHOSPHATE, MccF
Authors:Agarwal, V, Nair, S.K.
Deposit date:2011-08-30
Release date:2012-02-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure and function of a serine carboxypeptidase adapted for degradation of the protein synthesis antibiotic microcin C7.
Proc.Natl.Acad.Sci.USA, 109, 2012
3SMA
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BU of 3sma by Molmil
A new N-acetyltransferase fold in the structure and mechanism of the phosphonate biosynthetic enzyme FrbF
Descriptor: ACETYL COENZYME *A, FrbF
Authors:Bae, B, Nair, S.K.
Deposit date:2011-06-27
Release date:2011-08-24
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:New N-Acetyltransferase Fold in the Structure and Mechanism of the Phosphonate Biosynthetic Enzyme FrbF.
J.Biol.Chem., 286, 2011
3T33
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BU of 3t33 by Molmil
Crystal Structure of Arabidopsis GCR2
Descriptor: ACETATE ION, G protein coupled receptor, ZINC ION
Authors:Chen, J.-H, Guo, J, Chen, J.-G, Nair, S.K.
Deposit date:2011-07-24
Release date:2013-04-17
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal Structure of Arabidopsis GCR2 Identifies a Novel Clade of Lantibiotic Cyclase-Like Proteins
To be Published
3SZY
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BU of 3szy by Molmil
Crystal Structure of Phosphonoacetate hydrolase from Sinorhizobium meliloti 1021 in APO form
Descriptor: ZINC ION, phosphonoacetate hydrolase
Authors:Agarwal, V, Nair, S.K.
Deposit date:2011-07-19
Release date:2011-08-03
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structural and mechanistic insights into C-p bond hydrolysis by phosphonoacetate hydrolase.
Chem.Biol., 18, 2011
3RIT
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BU of 3rit by Molmil
Crystal structure of Dipeptide Epimerase from Methylococcus capsulatus complexed with Mg and dipeptide L-Arg-D-Lys
Descriptor: ARGININE, D-LYSINE, Dipeptide epimerase, ...
Authors:Lukk, T, Sakai, A, Song, L, Gerlt, J.A, Nair, S.K.
Deposit date:2011-04-14
Release date:2011-04-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.701 Å)
Cite:Homology models guide discovery of diverse enzyme specificities among dipeptide epimerases in the enolase superfamily.
Proc.Natl.Acad.Sci.USA, 109, 2012
3T01
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BU of 3t01 by Molmil
Crystal Structure of Phosphonoacetate hydrolase from Sinorhizobium meliloti 1021 in complex with Phosphonoformate
Descriptor: PHOSPHONOFORMIC ACID, ZINC ION, phosphonoacetate hydrolase
Authors:Agarwal, V, Nair, S.K.
Deposit date:2011-07-19
Release date:2011-08-03
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural and mechanistic insights into C-p bond hydrolysis by phosphonoacetate hydrolase.
Chem.Biol., 18, 2011

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