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PDB: 282 件
5WA3
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Pyridine synthase, TbtD, from thiomuracin biosynthesis
分子名称: Pyridine synthase TbtD
著者Cogan, D.P, Nair, S.K.
登録日2017-06-24
公開日2017-11-22
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural insights into enzymatic [4+2] aza-cycloaddition in thiopeptide antibiotic biosynthesis.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
4Q85
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BU of 4q85 by Molmil
YcaO with Non-hydrolyzable ATP (AMPCPP) Bound
分子名称: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, MAGNESIUM ION, Ribosomal protein S12 methylthiotransferase accessory factor YcaO
著者Chekan, J.R, Nair, S.K.
登録日2014-04-25
公開日2014-08-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.29 Å)
主引用文献Discovery of a new ATP-binding motif involved in peptidic azoline biosynthesis.
Nat.Chem.Biol., 10, 2014
5U58
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BU of 5u58 by Molmil
Psf4 in complex with Fe2+ and (R)-2-HPP
分子名称: (S)-2-hydroxypropylphosphonic acid epoxidase, FE (III) ION, [(2R)-2-hydroxypropyl]phosphonic acid
著者Chekan, J.R, Nair, S.K.
登録日2016-12-06
公開日2017-01-04
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Characterization of Two Late-Stage Enzymes Involved in Fosfomycin Biosynthesis in Pseudomonads.
ACS Chem. Biol., 12, 2017
5V1U
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TbiB1 in Complex with the TbiA(beta) Leader Peptide
分子名称: TbiA(beta) Thr(-5)Glu Leader, TbiB1, ZINC ION
著者Chekan, J.R, Nair, S.K.
登録日2017-03-02
公開日2018-09-05
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.052 Å)
主引用文献Steric complementarity directs sequence promiscuous leader binding in RiPP biosynthesis.
Proc.Natl.Acad.Sci.USA, 116, 2019
5U5D
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BU of 5u5d by Molmil
Psf4 in complex with Mn2+ and (R)-2-HPP
分子名称: (S)-2-hydroxypropylphosphonic acid epoxidase, MANGANESE (II) ION, [(2R)-2-hydroxypropyl]phosphonic acid
著者Chekan, J.R, Nair, S.K.
登録日2016-12-06
公開日2017-01-04
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Characterization of Two Late-Stage Enzymes Involved in Fosfomycin Biosynthesis in Pseudomonads.
ACS Chem. Biol., 12, 2017
5TTY
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BU of 5tty by Molmil
PagF prenyltransferase
分子名称: DI(HYDROXYETHYL)ETHER, PagF prenyltransferase
著者Hao, Y, Nair, S.K.
登録日2016-11-04
公開日2016-11-30
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Molecular basis for the broad substrate selectivity of a peptide prenyltransferase.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5U5G
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Psf3 in complex with NADP+ and 2-OPP
分子名称: (2-oxopropyl)phosphonic acid, 6-phosphogluconate dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
著者Olivares, P, Nair, S.K.
登録日2016-12-06
公開日2017-01-04
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.048 Å)
主引用文献Characterization of Two Late-Stage Enzymes Involved in Fosfomycin Biosynthesis in Pseudomonads.
ACS Chem. Biol., 12, 2017
4Q86
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YcaO with AMP Bound
分子名称: ADENOSINE MONOPHOSPHATE, MAGNESIUM ION, Ribosomal protein S12 methylthiotransferase accessory factor YcaO
著者Chekan, J.R, Nair, S.K.
登録日2014-04-25
公開日2014-08-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Discovery of a new ATP-binding motif involved in peptidic azoline biosynthesis.
Nat.Chem.Biol., 10, 2014
3TLB
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BU of 3tlb by Molmil
Microcin C7 self immunity protein MccF in complex aspartyl sulfamoyl adenosine
分子名称: 5'-O-(L-alpha-aspartylsulfamoyl)adenosine, MccF
著者Agarwal, V, Nair, S.K.
登録日2011-08-29
公開日2012-02-29
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.501 Å)
主引用文献Structure and function of a serine carboxypeptidase adapted for degradation of the protein synthesis antibiotic microcin C7.
Proc.Natl.Acad.Sci.USA, 109, 2012
4QEC
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ElxO with NADP Bound
分子名称: ElxO, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, SULFATE ION
著者Garg, N, Nair, S.K.
登録日2014-05-15
公開日2014-07-02
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Substrate Specificity of the Lanthipeptide Peptidase ElxP and the Oxidoreductase ElxO.
Acs Chem.Biol., 9, 2014
3TLE
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BU of 3tle by Molmil
Microcin C7 self immunity protein MccF in complex with glutamyl sulfamoyl adenylate
分子名称: 1,2-ETHANEDIOL, MccF, O5'-(L-GLUTAMYL-SULFAMOYL)-ADENOSINE
著者Agarwal, V, Nair, S.K.
登録日2011-08-29
公開日2012-02-29
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structure and function of a serine carboxypeptidase adapted for degradation of the protein synthesis antibiotic microcin C7.
Proc.Natl.Acad.Sci.USA, 109, 2012
4QED
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BU of 4qed by Molmil
ElxO Y152F with NADPH Bound
分子名称: ElxO, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, SULFATE ION
著者Garg, N, Nair, S.K.
登録日2014-05-15
公開日2014-07-02
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Substrate Specificity of the Lanthipeptide Peptidase ElxP and the Oxidoreductase ElxO.
Acs Chem.Biol., 9, 2014
3TLA
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BU of 3tla by Molmil
Microcin C7 self immunity protein MccF in the wild type APO state
分子名称: 1,2-ETHANEDIOL, MccF
著者Agarwal, V, Nair, S.K.
登録日2011-08-29
公開日2012-02-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.201 Å)
主引用文献Structure and function of a serine carboxypeptidase adapted for degradation of the protein synthesis antibiotic microcin C7.
Proc.Natl.Acad.Sci.USA, 109, 2012
3TLZ
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BU of 3tlz by Molmil
Microcin C7 self immunity protein MccF mutant W186F in complex with Adenosine Monophosphate
分子名称: 1,2-ETHANEDIOL, ADENOSINE MONOPHOSPHATE, MccF
著者Agarwal, V, Nair, S.K.
登録日2011-08-30
公開日2012-02-29
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure and function of a serine carboxypeptidase adapted for degradation of the protein synthesis antibiotic microcin C7.
Proc.Natl.Acad.Sci.USA, 109, 2012
3UQ4
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BU of 3uq4 by Molmil
X-ray structure of a pentameric ligand gated ion channel from Erwinia chrysanthemi (ELIC) mutant F247L (F16L)
分子名称: Gamma-aminobutyric-acid receptor subunit beta-1, SODIUM ION
著者Gonzalez-Gutierrez, G, Lukk, T, Agarwal, V, Papke, D, Nair, S.K, Grosman, C.
登録日2011-11-19
公開日2012-04-04
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Mutations that stabilize the open state of the Erwinia chrisanthemi ligand-gated ion channel fail to change the conformation of the pore domain in crystals.
Proc.Natl.Acad.Sci.USA, 109, 2012
5TXC
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BU of 5txc by Molmil
AtxE2 Isopeptidase - APO
分子名称: AtxE2
著者Chekan, J.R, Nair, S.K.
登録日2016-11-16
公開日2016-12-21
最終更新日2017-01-04
実験手法X-RAY DIFFRACTION (2.401 Å)
主引用文献Structure of the Lasso Peptide Isopeptidase Identifies a Topology for Processing Threaded Substrates.
J. Am. Chem. Soc., 138, 2016
5TXE
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BU of 5txe by Molmil
AtxE2 Isopeptidase - S527A Variant with Astexin3-dC4 Bound
分子名称: Astexin3-dC4, AtxE2
著者Chekan, J.R, Nair, S.K.
登録日2016-11-16
公開日2016-12-21
最終更新日2017-01-04
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of the Lasso Peptide Isopeptidase Identifies a Topology for Processing Threaded Substrates.
J. Am. Chem. Soc., 138, 2016
4R9G
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BU of 4r9g by Molmil
CpMnBP1 with Mannotriose Bound
分子名称: MBP1, ZINC ION, beta-D-mannopyranose-(1-4)-beta-D-mannopyranose-(1-4)-alpha-D-mannopyranose
著者Chekan, J.R, Agarwal, V, Nair, S.K.
登録日2014-09-04
公開日2014-10-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural and Biochemical Basis for Mannan Utilization by Caldanaerobius polysaccharolyticus Strain ATCC BAA-17.
J.Biol.Chem., 289, 2014
3TLY
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BU of 3tly by Molmil
Microcin C7 self immunity protein MccF active site mutant S118A/N220A/K247A in the apo state
分子名称: 1,2-ETHANEDIOL, MccF
著者Agarwal, V, Nair, S.K.
登録日2011-08-30
公開日2012-02-29
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure and function of a serine carboxypeptidase adapted for degradation of the protein synthesis antibiotic microcin C7.
Proc.Natl.Acad.Sci.USA, 109, 2012
5V1V
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BU of 5v1v by Molmil
TbiB1 in Complex with the TbiA(alpha) Leader Peptide
分子名称: TbiA(alpha) Leader Peptide, TbiB1, ZINC ION
著者Chekan, J.R, Nair, S.K.
登録日2017-03-02
公開日2018-09-05
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Steric complementarity directs sequence promiscuous leader binding in RiPP biosynthesis.
Proc.Natl.Acad.Sci.USA, 116, 2019
3UQ5
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BU of 3uq5 by Molmil
X-ray structure of a pentameric ligand gated ion channel from Erwinia chrysanthemi (ELIC) mutant L240A F247L (L9A F16L) in the presence of 10 mM cysteamine
分子名称: Gamma-aminobutyric-acid receptor subunit beta-1, SODIUM ION
著者Gonzalez-Gutierrez, G, Lukk, T, Agarwal, V, Papke, D, Nair, S.K, Grosman, C.
登録日2011-11-19
公開日2012-04-04
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (4.2 Å)
主引用文献Mutations that stabilize the open state of the Erwinia chrisanthemi ligand-gated ion channel fail to change the conformation of the pore domain in crystals.
Proc.Natl.Acad.Sci.USA, 109, 2012
4QPW
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BU of 4qpw by Molmil
BiXyn10A CBM1 with Xylohexaose Bound
分子名称: beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose, glycosyl hydrolase family 10
著者Chekan, J.R, Nair, S.K.
登録日2014-06-25
公開日2014-08-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.14 Å)
主引用文献Xylan utilization in human gut commensal bacteria is orchestrated by unique modular organization of polysaccharide-degrading enzymes.
Proc.Natl.Acad.Sci.USA, 111, 2014
3UQ7
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BU of 3uq7 by Molmil
X-ray structure of a pentameric ligand gated ion channel from Erwinia chrysanthemi (ELIC) mutant L240S F247L (L9S F16L) in presence of 10 mM cysteamine
分子名称: Gamma-aminobutyric-acid receptor subunit beta-1
著者Gonzalez-Gutierrez, G, Lukk, T, Agarwal, V, Papke, D, Nair, S.K, Grosman, C.
登録日2011-11-19
公開日2012-04-04
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献Mutations that stabilize the open state of the Erwinia chrisanthemi ligand-gated ion channel fail to change the conformation of the pore domain in crystals.
Proc.Natl.Acad.Sci.USA, 109, 2012
4Q84
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BU of 4q84 by Molmil
Apo YcaO
分子名称: MERCURY (II) ION, Ribosomal protein S12 methylthiotransferase accessory factor YcaO
著者Chekan, J.R, Nair, S.K.
登録日2014-04-25
公開日2014-08-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.64 Å)
主引用文献Discovery of a new ATP-binding motif involved in peptidic azoline biosynthesis.
Nat.Chem.Biol., 10, 2014
3EUO
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BU of 3euo by Molmil
crystal structure of a fungal type III polyketide synthase, ORAS
分子名称: Type III Pentaketide Synthase
著者Zhang, H, Brunzelle, J.S, Nair, S.K.
登録日2008-10-10
公開日2008-11-04
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Distinct Structural Elements Dictate the Specificity of the Type III Pentaketide Synthase from Neurospora crassa.
Chem.Biol., 15, 2008

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