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PDB: 42 件
8K9O
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BU of 8k9o by Molmil
Crystal structure of Cyanobacteriochrome RcaE GAF domain in Pg state
分子名称: PHYCOCYANOBILIN, histidine kinase
著者Nagae, T, Hirose, Y, Mishima, M.
登録日2023-08-01
公開日2024-05-15
最終更新日2024-06-26
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Green/red light-sensing mechanism in the chromatic acclimation photosensor.
Sci Adv, 10, 2024
3WZY
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BU of 3wzy by Molmil
S266A mutant 3-isopropylmalate dehydrogenase from Shewanella oneidensis MR-1 at 580MPa - complex with IPM and Mg
分子名称: 3-ISOPROPYLMALIC ACID, 3-isopropylmalate dehydrogenase, MAGNESIUM ION
著者Nagae, T, Watanabe, N.
登録日2014-10-08
公開日2015-10-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Pressure Adaptation of 3-Isopropylmalate Dehydrogenase from the Extremely Piezophilic Bacterium Shewanella benthica is Attributed to just One Amino Acid Substitution
To be Published
3WZW
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BU of 3wzw by Molmil
3-isopropylmalate dehydrogenase from Shewanella oneidensis MR-1 at 580MPa - complex with IPM and Mg
分子名称: 3-ISOPROPYLMALIC ACID, 3-isopropylmalate dehydrogenase, MAGNESIUM ION
著者Nagae, T, Watanabe, N.
登録日2014-10-08
公開日2015-10-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Pressure Adaptation of 3-Isopropylmalate Dehydrogenase from the Extremely Piezophilic Bacterium Shewanella benthica is Attributed to just One Amino Acid Substitution
To be Published
3WZV
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BU of 3wzv by Molmil
3-isopropylmalate dehydrogenase from Shewanella oneidensis MR-1 at 0.1MPa - complex with IPM and Mg
分子名称: 3-ISOPROPYLMALIC ACID, 3-isopropylmalate dehydrogenase, MAGNESIUM ION
著者Nagae, T, Watanabe, N.
登録日2014-10-07
公開日2015-10-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Pressure Adaptation of 3-Isopropylmalate Dehydrogenase from the Extremely Piezophilic Bacterium Shewanella benthica is Attributed to just One Amino Acid Substitution
To be Published
3WZX
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BU of 3wzx by Molmil
S266A mutant 3-isopropylmalate dehydrogenase from Shewanella oneidensis MR-1 at 0.1MPa - complex with IPM and Mg
分子名称: 3-ISOPROPYLMALIC ACID, 3-isopropylmalate dehydrogenase, MAGNESIUM ION
著者Nagae, T, Watanabe, N.
登録日2014-10-08
公開日2015-10-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Pressure Adaptation of 3-Isopropylmalate Dehydrogenase from the Extremely Piezophilic Bacterium Shewanella benthica is Attributed to just One Amino Acid Substitution
To be Published
7CKV
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BU of 7ckv by Molmil
Crystal structure of Cyanobacteriochrome GAF domain in Pr state
分子名称: MAGNESIUM ION, PHYCOCYANOBILIN, RcaE
著者Nagae, T, Koizumi, T, Hirose, Y, Mishima, M.
登録日2020-07-19
公開日2021-05-05
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Structural basis of the protochromic green/red photocycle of the chromatic acclimation sensor RcaE.
Proc.Natl.Acad.Sci.USA, 118, 2021
3VL6
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BU of 3vl6 by Molmil
3-isopropylmalate dehydrogenase from Shewanella oneidensis MR-1 at 580 MPa
分子名称: 3-ISOPROPYLMALIC ACID, 3-isopropylmalate dehydrogenase, CALCIUM ION, ...
著者Nagae, T, Watanabe, N.
登録日2011-11-29
公開日2012-02-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献High-pressure-induced water penetration into 3-isopropylmalate dehydrogenase
Acta Crystallogr.,Sect.D, 68, 2012
3VKZ
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BU of 3vkz by Molmil
3-isopropylmalate dehydrogenase from Shewanella oneidensis MR-1 at atmospheric pressure
分子名称: 3-ISOPROPYLMALIC ACID, 3-isopropylmalate dehydrogenase, CALCIUM ION, ...
著者Nagae, T, Watanabe, N.
登録日2011-11-28
公開日2012-02-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献High-pressure-induced water penetration into 3-isopropylmalate dehydrogenase
Acta Crystallogr.,Sect.D, 68, 2012
3VL4
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BU of 3vl4 by Molmil
3-isopropylmalate dehydrogenase from Shewanella oneidensis MR-1 at 410 MPa
分子名称: 3-ISOPROPYLMALIC ACID, 3-isopropylmalate dehydrogenase, CALCIUM ION, ...
著者Nagae, T, Watanabe, N.
登録日2011-11-29
公開日2012-02-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献High-pressure-induced water penetration into 3-isopropylmalate dehydrogenase
Acta Crystallogr.,Sect.D, 68, 2012
3VL3
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BU of 3vl3 by Molmil
3-isopropylmalate dehydrogenase from Shewanella oneidensis MR-1 at 340 MPa
分子名称: 3-ISOPROPYLMALIC ACID, 3-isopropylmalate dehydrogenase, CALCIUM ION, ...
著者Nagae, T, Watanabe, N.
登録日2011-11-29
公開日2012-02-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献High-pressure-induced water penetration into 3-isopropylmalate dehydrogenase
Acta Crystallogr.,Sect.D, 68, 2012
3VL2
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BU of 3vl2 by Molmil
3-isopropylmalate dehydrogenase from Shewanella oneidensis MR-1 at 160 MPa
分子名称: 3-ISOPROPYLMALIC ACID, 3-isopropylmalate dehydrogenase, CALCIUM ION, ...
著者Nagae, T, Watanabe, N.
登録日2011-11-29
公開日2012-02-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献High-pressure-induced water penetration into 3-isopropylmalate dehydrogenase
Acta Crystallogr.,Sect.D, 68, 2012
3VL7
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BU of 3vl7 by Molmil
3-isopropylmalate dehydrogenase from Shewanella oneidensis MR-1 at 650 MPa
分子名称: 3-ISOPROPYLMALIC ACID, 3-isopropylmalate dehydrogenase, CALCIUM ION, ...
著者Nagae, T, Watanabe, N.
登録日2011-11-29
公開日2012-02-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献High-pressure-induced water penetration into 3-isopropylmalate dehydrogenase
Acta Crystallogr.,Sect.D, 68, 2012
3VML
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BU of 3vml by Molmil
Chimera 3-isopropylmalate dehydrogenase between Shewanella oneidensis MR-1 (O) and Shewanella benthica DB21 MT-2 (M) from N-terminal: 20% O middle 70% M residual 10% O
分子名称: 3-ISOPROPYLMALIC ACID, 3-isopropylmalate dehydrogenase, CHLORIDE ION, ...
著者Nagae, T, Watanabe, N.
登録日2011-12-13
公開日2012-12-26
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Structure analysis of chimeric 3-isopropylmalate dehydrogenase between the obligate piezophile Shewanella benthica DB21MT-2 and the nonpiezophile Shewanella oneidensis MR-1
To be Published
3VMK
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BU of 3vmk by Molmil
3-isopropylmalate dehydrogenase from Shewanella benthica DB21 MT-2
分子名称: 3-ISOPROPYLMALIC ACID, 3-isopropylmalate dehydrogenase, CHLORIDE ION, ...
著者Nagae, T, Watanabe, N.
登録日2011-12-13
公開日2012-02-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Structural analysis of 3-isopropylmalate dehydrogenase from the obligate piezophile Shewanella benthica DB21MT-2 and the nonpiezophile Shewanella oneidensis MR-1
Acta Crystallogr.,Sect.F, 68, 2012
3VMJ
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BU of 3vmj by Molmil
3-isopropylmalate dehydrogenase from Shewanella oneidensis MR-1
分子名称: 3-ISOPROPYLMALIC ACID, 3-isopropylmalate dehydrogenase, CHLORIDE ION, ...
著者Nagae, T, Watanabe, N.
登録日2011-12-13
公開日2012-02-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Structural analysis of 3-isopropylmalate dehydrogenase from the obligate piezophile Shewanella benthica DB21MT-2 and the nonpiezophile Shewanella oneidensis MR-1
Acta Crystallogr.,Sect.F, 68, 2012
7VCG
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BU of 7vcg by Molmil
Thaumatin protected by alginate gel
分子名称: GLYCEROL, L(+)-TARTARIC ACID, Thaumatin I
著者Muroyama, H, Tomoike, F, Nagae, T, Okada, T.
登録日2021-09-03
公開日2022-09-07
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Post-crystallization protection of protein crystals
to be published
6LT5
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BU of 6lt5 by Molmil
Lysozyme protected by alginate gel
分子名称: CHLORIDE ION, GLYCEROL, Lysozyme C, ...
著者Tomoike, F, Morita, S, Nagae, T, Okada, T.
登録日2020-01-21
公開日2021-01-27
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.32 Å)
主引用文献Post-crystallization protection of protein crystals
To Be Published
7WXS
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BU of 7wxs by Molmil
Lysozyme protected by polyacrylamide gel
分子名称: CHLORIDE ION, GLYCEROL, Lysozyme C, ...
著者Muroyama, H, Tomoike, F, Nagae, T, Okada, T.
登録日2022-02-15
公開日2023-02-22
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Post-crystallization protection of protein crystals by polyacrylamide
To Be Published
7WXT
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BU of 7wxt by Molmil
Thaumatin protected by polyacrylamide gel
分子名称: GLYCEROL, L(+)-TARTARIC ACID, Thaumatin I
著者Muroyama, H, Tomoike, F, Nagae, T, Okada, T.
登録日2022-02-15
公開日2023-02-22
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Post-crystallization protection of protein crystals by polyacrylamide
To Be Published
7DF7
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BU of 7df7 by Molmil
Crystal structure of human V-1 in the apo form
分子名称: Myotrophin
著者Takeda, S, Nagae, T.
登録日2020-11-06
公開日2021-01-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of human V-1 in the apo form.
Acta Crystallogr.,Sect.F, 77, 2021
5Z98
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BU of 5z98 by Molmil
Crystal Structure of the Primate APOBEC3H Dimer mediated by RNA Duplex
分子名称: Apolipoprotein B mRNA editing enzyme catalytic polypeptide-like protein 3H, RNA (5'-R(*AP*UP*AP*CP*CP*CP*GP*GP*CP*A)-3'), RNA (5'-R(P*CP*UP*GP*CP*CP*GP*GP*GP*UP*A)-3'), ...
著者Matsuoka, T, Nagae, T, Ode, H, Watanabe, N, Iwatani, Y.
登録日2018-02-02
公開日2018-08-15
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis of chimpanzee APOBEC3H dimerization stabilized by double-stranded RNA.
Nucleic Acids Res., 46, 2018
5Z6J
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BU of 5z6j by Molmil
High-pressure Crystal Structure Analysis of M20 loop closed DHFR at 220 MPa
分子名称: Dihydrofolate reductase, FOLIC ACID, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Watanabe, N, Nagae, T, Yamada, H.
登録日2018-01-23
公開日2018-09-19
実験手法X-RAY DIFFRACTION (1.803 Å)
主引用文献High-pressure protein crystal structure analysis of Escherichia coli dihydrofolate reductase complexed with folate and NADP.
Acta Crystallogr D Struct Biol, 74, 2018
5Z6L
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BU of 5z6l by Molmil
High-pressure Crystal Structure Analysis of M20 loop closed DHFR at 650 MPa
分子名称: Dihydrofolate reductase, FOLIC ACID, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Watanabe, N, Nagae, T, Yamada, H.
登録日2018-01-23
公開日2018-09-19
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献High-pressure protein crystal structure analysis of Escherichia coli dihydrofolate reductase complexed with folate and NADP.
Acta Crystallogr D Struct Biol, 74, 2018
5Z6M
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BU of 5z6m by Molmil
High-pressure Crystal Structure Analysis of M20 loop closed DHFR at 800 MPa
分子名称: Dihydrofolate reductase, FOLIC ACID, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Watanabe, N, Nagae, T, Yamada, H.
登録日2018-01-23
公開日2018-09-19
実験手法X-RAY DIFFRACTION (2.202 Å)
主引用文献High-pressure protein crystal structure analysis of Escherichia coli dihydrofolate reductase complexed with folate and NADP.
Acta Crystallogr D Struct Biol, 74, 2018
5Z6K
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BU of 5z6k by Molmil
High-pressure Crystal Structure Analysis of M20 loop closed DHFR at 400 MPa
分子名称: Dihydrofolate reductase, FOLIC ACID, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Watanabe, N, Nagae, T, Yamada, H.
登録日2018-01-23
公開日2018-09-19
実験手法X-RAY DIFFRACTION (1.802 Å)
主引用文献High-pressure protein crystal structure analysis of Escherichia coli dihydrofolate reductase complexed with folate and NADP.
Acta Crystallogr D Struct Biol, 74, 2018

 

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