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PDB: 145 results

6OJR
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BU of 6ojr by Molmil
Crystal structure of Sphingomonas paucimobilis TMY1009 apo-LsdA
Descriptor: GLYCEROL, Lignostilbene-alpha,beta-dioxygenase isozyme I, MAGNESIUM ION
Authors:Kuatsjah, E, Verstraete, M.M, Kobylarz, M.J, Liu, A.K.N, Murphy, M.E.P, Eltis, L.D.
Deposit date:2019-04-12
Release date:2019-07-24
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Identification of functionally important residues and structural features in a bacterial lignostilbene dioxygenase.
J.Biol.Chem., 294, 2019
2ZDO
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BU of 2zdo by Molmil
Crystal structure of IsdG-N7A in complex with hemin
Descriptor: Heme-degrading monooxygenase isdG, PROTOPORPHYRIN IX CONTAINING FE
Authors:Lee, W.C, Reniere, M.L, Skaar, E.P, Murphy, M.E.P.
Deposit date:2007-11-27
Release date:2008-08-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Ruffling of Metalloporphyrins Bound to IsdG and IsdI, Two Heme-degrading Enzymes in Staphylococcus aureus
J.Biol.Chem., 283, 2008
2ZDP
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BU of 2zdp by Molmil
Crystal structure of IsdI in complex with Cobalt protoporphyrin IX
Descriptor: CHLORIDE ION, Heme-degrading monooxygenase isdI, PROTOPORPHYRIN IX CONTAINING CO
Authors:Lee, W.C, Reniere, M.L, Skaar, E.P, Murphy, M.E.P.
Deposit date:2007-11-27
Release date:2008-08-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Ruffling of Metalloporphyrins Bound to IsdG and IsdI, Two Heme-degrading Enzymes in Staphylococcus aureus
J.Biol.Chem., 283, 2008
2FJS
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BU of 2fjs by Molmil
Crystal Structure of Anaerobically Reduced Wild Type Nitrite Reductase from A. faecalis
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, COPPER (I) ION, ...
Authors:Tocheva, E.I, Murphy, M.E.P.
Deposit date:2006-01-03
Release date:2006-11-21
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Effect of the methionine ligand on the reorganization energy of the type-1 copper site of nitrite reductase.
J.Am.Chem.Soc., 129, 2007
6DA1
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BU of 6da1 by Molmil
ETS1 in complex with synthetic SRR mimic
Descriptor: Protein C-ets-1, SULFATE ION, serine-rich region (SRR) peptide
Authors:Perez-Borrajero, C, Okon, M, Lin, C.S, Scheu, K, Murphy, M.E.P, Graves, B.J, McIntosh, L.P.
Deposit date:2018-05-01
Release date:2019-01-16
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.000127 Å)
Cite:The Biophysical Basis for Phosphorylation-Enhanced DNA-Binding Autoinhibition of the ETS1 Transcription Factor.
J. Mol. Biol., 431, 2019
6DAT
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BU of 6dat by Molmil
ETS1 in complex with synthetic SRR mimic
Descriptor: Protein C-ets-1, SULFATE ION, serine-rich region (SRR) peptide
Authors:Perez-Borrajero, C, Okon, M, Lin, C.S, Scheu, K, Murphy, M.E.P, Graves, B.J, McIntosh, L.P.
Deposit date:2018-05-02
Release date:2019-01-16
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.35002637 Å)
Cite:The Biophysical Basis for Phosphorylation-Enhanced DNA-Binding Autoinhibition of the ETS1 Transcription Factor.
J. Mol. Biol., 431, 2019
2PPA
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BU of 2ppa by Molmil
Anaerobically manipulated wild type oxidized AfNiR bound to nitrous oxide
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, COPPER (I) ION, ...
Authors:Tocheva, E.I, Murphy, M.E.P.
Deposit date:2007-04-28
Release date:2008-04-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Conserved active site residues limit inhibition of a copper-containing nitrite reductase by small molecules.
Biochemistry, 47, 2008
2PPD
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BU of 2ppd by Molmil
Oxidized H145A mutant of AfNiR bound to nitric oxide
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, COPPER (I) ION, ...
Authors:Tocheva, E.I, Murphy, M.E.P.
Deposit date:2007-04-28
Release date:2008-01-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Stable copper-nitrosyl formation by nitrite reductase in either oxidation state
Biochemistry, 46, 2007
3GDC
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BU of 3gdc by Molmil
Crystal structure of multicopper oxidase
Descriptor: CALCIUM ION, COPPER (II) ION, Multicopper oxidase
Authors:MacPherson, I.S, Lee, W.C, Liang, T.I, Murphy, M.E.P.
Deposit date:2009-02-24
Release date:2010-03-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A trimeric multicopper oxidase provides an evolutionary link to nitrite reductase
To be Published
4MP8
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BU of 4mp8 by Molmil
Staphyloferrin B precursor biosynthetic enzyme SbnB bound to malonate and NAD+
Descriptor: MALONATE ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Putative ornithine cyclodeaminase
Authors:Grigg, J.C, Kobylarz, M.J, Rai, D.K, Murphy, M.E.P.
Deposit date:2013-09-12
Release date:2014-03-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Synthesis of L-2,3-diaminopropionic Acid, a siderophore and antibiotic precursor.
Chem.Biol., 21, 2014
4N7K
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BU of 4n7k by Molmil
Zinc Substituted Reaction Center of the Rhodobacter sphaeroides
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CARDIOLIPIN, FE (III) ION, ...
Authors:Hardjasa, A, Murphy, M.E.P.
Deposit date:2013-10-15
Release date:2014-02-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structural and kinetic properties of Rhodobacter sphaeroides photosynthetic reaction centers containing exclusively Zn-coordinated bacteriochlorophyll as bacteriochlorin cofactors.
Biochim.Biophys.Acta, 1837, 2013
4MP3
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BU of 4mp3 by Molmil
Staphyloferrin B precursor biosynthetic enzyme selenomethionine-labeled SbnB
Descriptor: GLYCEROL, Putative ornithine cyclodeaminase, SULFATE ION
Authors:Grigg, J.C, Kobylarz, M.J, Rai, D.K, Murphy, M.E.P.
Deposit date:2013-09-12
Release date:2014-03-05
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Synthesis of L-2,3-diaminopropionic Acid, a siderophore and antibiotic precursor.
Chem.Biol., 21, 2014
4MPD
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BU of 4mpd by Molmil
Staphyloferrin B precursor biosynthetic enzyme SbnB bound a-ketoglutarate and NAD+
Descriptor: 2-OXOGLUTARIC ACID, NICOTINAMIDE-ADENINE-DINUCLEOTIDE (ACIDIC FORM), Putative ornithine cyclodeaminase
Authors:Kobylarz, M.J, Murphy, M.E.P.
Deposit date:2013-09-12
Release date:2014-03-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.101 Å)
Cite:Synthesis of L-2,3-diaminopropionic Acid, a siderophore and antibiotic precursor.
Chem.Biol., 21, 2014
6OJW
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BU of 6ojw by Molmil
Crystal structure of Sphingomonas paucimobilis TMY1009 holo-LsdA
Descriptor: FE (III) ION, GLYCEROL, Lignostilbene-alpha,beta-dioxygenase isozyme I, ...
Authors:Kuatsjah, E, Verstraete, M.M, Kobylarz, M.J, Liu, A.K.N, Murphy, M.E.P, Eltis, L.D.
Deposit date:2019-04-12
Release date:2019-07-24
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Identification of functionally important residues and structural features in a bacterial lignostilbene dioxygenase.
J.Biol.Chem., 294, 2019
6NR6
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BU of 6nr6 by Molmil
Crystal Structure of Staphylococcus pseudintermedius SbnI in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Bifunctional transcriptional regulator/O-phospho-L-serine synthase SbnI, MAGNESIUM ION
Authors:Verstraete, M.M, Morales, L.D, Kobylarz, M.J, Loutet, S.A, Laakso, H.A, Heinrichs, D.E, Murphy, M.E.P.
Deposit date:2019-01-22
Release date:2019-06-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The heme-sensitive regulator SbnI has a bifunctional role in staphyloferrin B production by Staphylococcus aureus .
J.Biol.Chem., 294, 2019
6OHK
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BU of 6ohk by Molmil
Crystal structure of Fusobacterium nucleatum flavodoxin mutant K13G bound to flavin mononucleotide
Descriptor: FLAVIN MONONUCLEOTIDE, Flavodoxin, GLYCEROL
Authors:Kolesnikov, M, Murphy, M.E.P.
Deposit date:2019-04-05
Release date:2019-06-05
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structural insight into the high reduction potentials observed for Fusobacterium nucleatum flavodoxin.
Protein Sci., 28, 2019
6OHL
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BU of 6ohl by Molmil
Crystal structure of Fusobacterium nucleatum flavodoxin bound to flavin mononucleotide
Descriptor: FLAVIN MONONUCLEOTIDE, Flavodoxin, GLYCEROL, ...
Authors:Kolesnikov, M, Murphy, M.E.P.
Deposit date:2019-04-05
Release date:2019-06-05
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural insight into the high reduction potentials observed for Fusobacterium nucleatum flavodoxin.
Protein Sci., 28, 2019
6OJT
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BU of 6ojt by Molmil
Crystal structure of Sphingomonas paucimobilis TMY1009 LsdA phenylazophenol complex
Descriptor: 4-Hydroxyazobenzene, FE (III) ION, Lignostilbene-alpha,beta-dioxygenase isozyme I
Authors:Kuatsjah, E, Verstraete, M.M, Kobylarz, M.J, Liu, A.K.N, Murphy, M.E.P, Eltis, L.D.
Deposit date:2019-04-12
Release date:2019-07-24
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Identification of functionally important residues and structural features in a bacterial lignostilbene dioxygenase.
J.Biol.Chem., 294, 2019
1SJM
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BU of 1sjm by Molmil
Nitrite bound copper containing nitrite reductase
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, COPPER (II) ION, ...
Authors:Tocheva, E.I, Rosell, F.I, Mauk, A.G, Murphy, M.E.P.
Deposit date:2004-03-03
Release date:2004-06-22
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Side-on copper-nitrosyl coordination by nitrite reductase.
Science, 304, 2004
1Y9U
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BU of 1y9u by Molmil
Bordetella ferric binding protein
Descriptor: putative iron binding protein
Authors:Tom-Yew, S.A.L, Cui, D.T, Bekker, E.G, Murphy, M.E.P.
Deposit date:2004-12-16
Release date:2005-01-11
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:Anion-independent iron coordination by the Campylobacter jejuni ferric binding protein
J.Biol.Chem., 280, 2005
1Y4T
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BU of 1y4t by Molmil
Ferric binding protein from Campylobacter jejuni
Descriptor: FE (III) ION, putative iron-uptake ABC transport system periplasmic iron-binding protein
Authors:Tom-Yew, S.A.L, Cui, D.T, Bekker, E.G, Murphy, M.E.P.
Deposit date:2004-12-01
Release date:2005-01-11
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Anion-independent iron coordination by the Campylobacter jejuni ferric binding protein
J.Biol.Chem., 280, 2005
5VN5
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BU of 5vn5 by Molmil
Crystal structure of LigY from Sphingobium sp. strain SYK-6
Descriptor: 2,2',3-trihydroxy-3'-methoxy-5,5'-dicarboxybiphenyl meta-cleavage compound hydrolase, CHLORIDE ION, ZINC ION
Authors:Kuatsjah, E, Chan, A.C.K, Kobylarz, M.J, Murphy, M.E.P, Eltis, L.D.
Deposit date:2017-04-28
Release date:2017-09-27
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The bacterialmeta-cleavage hydrolase LigY belongs to the amidohydrolase superfamily, not to the alpha / beta-hydrolase superfamily.
J. Biol. Chem., 292, 2017
5TWB
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BU of 5twb by Molmil
Oxidoreductase IruO in the reduced form
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Ferredoxin--NADP reductase, GLYCEROL
Authors:Kobylarz, M.J, Heieis, G.A, Loutet, S.A, Murphy, M.E.P.
Deposit date:2016-11-12
Release date:2017-10-04
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.822 Å)
Cite:Iron Uptake Oxidoreductase (IruO) Uses a Flavin Adenine Dinucleotide Semiquinone Intermediate for Iron-Siderophore Reduction.
ACS Chem. Biol., 12, 2017
5TWC
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BU of 5twc by Molmil
Oxidoreductase IruO in the oxidized form
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Ferredoxin--NADP reductase
Authors:Kobylarz, M.J, Heieis, G.A, Loutet, S.A, Murphy, M.E.P.
Deposit date:2016-11-12
Release date:2017-10-04
Last modified:2020-01-08
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Iron Uptake Oxidoreductase (IruO) Uses a Flavin Adenine Dinucleotide Semiquinone Intermediate for Iron-Siderophore Reduction.
ACS Chem. Biol., 12, 2017
2GDR
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BU of 2gdr by Molmil
Crystal structure of a bacterial glutathione transferase
Descriptor: GLUTATHIONE, glutathione S-transferase
Authors:Tocheva, E.I, Fortin, P.D, Eltis, L.D, Murphy, M.E.P.
Deposit date:2006-03-16
Release date:2006-08-22
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structures of Ternary Complexes of BphK, a Bacterial Glutathione S-Transferase That Reductively Dechlorinates Polychlorinated Biphenyl Metabolites.
J.Biol.Chem., 281, 2006

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