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PDB: 137 results

3A09
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Crystal structure of Sphingomonas sp. A1 alginate-binding protein AlgQ1 in complex with unsaturated trimannuronate
Descriptor: 4-deoxy-alpha-L-erythro-hex-4-enopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid-(1-4)-alpha-D-mannopyranuronic acid, AlgQ1, CALCIUM ION
Authors:Itoh, T, Mikami, B, Hashimoto, W, Murata, K.
Deposit date:2009-03-12
Release date:2010-03-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of Sphingomonas sp. A1 alginate-binding protein AlgQ1 in complex with unsaturated trimannuronate
To be Published
2XD8
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Capsid structure of the infectious Prochlorococcus Cyanophage P-SSP7
Descriptor: T7-LIKE CAPSID PROTEIN
Authors:Liu, X, Zhang, Q, Murata, K, Baker, M.L, Sullivan, M.B, Fu, C, Dougherty, M, Schmid, M.F, Osburne, M.S, Chisholm, S.W, Chiu, W.
Deposit date:2010-04-30
Release date:2010-06-16
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:Structural Changes in a Marine Podovirus Associated with Release of its Genome Into Prochlorococcus
Nat.Struct.Mol.Biol., 17, 2010
3AFM
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Crystal structure of aldose reductase A1-R responsible for alginate metabolism
Descriptor: Carbonyl reductase
Authors:Takase, R, Ochiai, A, Mikami, B, Hashimoto, W, Murata, K.
Deposit date:2010-03-10
Release date:2010-08-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Molecular identification of unsaturated uronate reductase prerequisite for alginate metabolism in Sphingomonas sp. A1
Biochim.Biophys.Acta, 1804, 2010
3AMI
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The crystal structure of the M16B metallopeptidase subunit from Sphingomonas sp. A1
Descriptor: zinc peptidase
Authors:Maruyama, Y, Chuma, A, Mikami, B, Hashimoto, W, Murata, K.
Deposit date:2010-08-20
Release date:2011-02-02
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Heterosubunit composition and crystal structures of a novel bacterial M16B metallopeptidase
J.Mol.Biol., 407, 2011
3AMJ
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The crystal structure of the heterodimer of M16B peptidase from Sphingomonas sp. A1
Descriptor: ZINC ION, zinc peptidase active subunit, zinc peptidase inactive subunit
Authors:Maruyama, Y, Chuma, A, Mikami, B, Hashimoto, W, Murata, K.
Deposit date:2010-08-20
Release date:2011-02-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3 Å)
Cite:Heterosubunit composition and crystal structures of a novel bacterial M16B metallopeptidase
J.Mol.Biol., 407, 2011
3ANI
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Crystal structure of unsaturated glucuronyl hydrolase mutant D175N from Streptcoccus agalactiae
Descriptor: Putative uncharacterized protein gbs1889
Authors:Nakamichi, Y, Maruyama, Y, Mikami, B, Hashimoto, W, Murata, K.
Deposit date:2010-09-02
Release date:2010-10-06
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural determinants in streptococcal unsaturated glucuronyl hydrolase for recognition of glycosaminoglycan sulfate groups
J.Biol.Chem., 286, 2011
3AT7
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BU of 3at7 by Molmil
Crystal structure of bacterial cell-surface alginate-binding protein Algp7
Descriptor: Alginate-binding flagellin
Authors:Maruyama, Y, Ochiai, A, Mikami, B, Hashimoto, W, Murata, K.
Deposit date:2010-12-27
Release date:2011-02-23
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of bacterial cell-surface alginate-binding protein with an M75 peptidase motif.
Biochem.Biophys.Res.Commun., 405, 2011
3ANJ
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BU of 3anj by Molmil
Crystal structure of unsaturated glucuronyl hydrolase from Streptcoccus agalactiae
Descriptor: Putative uncharacterized protein gbs1889
Authors:Nakamichi, Y, Maruyama, Y, Mikami, B, Hashimoto, W, Murata, K.
Deposit date:2010-09-02
Release date:2010-10-06
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural determinants in streptococcal unsaturated glucuronyl hydrolase for recognition of glycosaminoglycan sulfate groups
J.Biol.Chem., 286, 2011
3AFL
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BU of 3afl by Molmil
Crystal structure of exotype alginate lyase Atu3025 H531A complexed with alginate trisaccharide
Descriptor: 4-deoxy-alpha-L-erythro-hex-4-enopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid, Oligo alginate lyase
Authors:Ochiai, A, Yamasaki, M, Mikami, B, Hashimoto, W, Murata, K.
Deposit date:2010-03-09
Release date:2010-04-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:Crystal structure of exotype alginate lyase Atu3025 from Agrobacterium tumefaciens
J.Biol.Chem., 285, 2010
3ANK
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Crystal structure of unsaturated glucuronyl hydrolase mutant D175N from Streptcoccus agalactiae complexed with dGlcA-GalNAc6S
Descriptor: 1,2-ETHANEDIOL, 4-deoxy-alpha-L-threo-hex-4-enopyranuronic acid-(1-3)-2-acetamido-2-deoxy-6-O-sulfo-beta-D-galactopyranose, Putative uncharacterized protein gbs1889
Authors:Nakamichi, Y, Maruyama, Y, Mikami, B, Hashimoto, W, Murata, K.
Deposit date:2010-09-02
Release date:2010-10-06
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Structural determinants in streptococcal unsaturated glucuronyl hydrolase for recognition of glycosaminoglycan sulfate groups
J.Biol.Chem., 286, 2011
3AY2
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Crystal structure of Neisserial azurin
Descriptor: GLYCEROL, Lipid modified azurin protein, SULFATE ION, ...
Authors:Ochiai, A, Hashimoto, W, Yamada, T, Chakrabarty, A.M, Murata, K.
Deposit date:2011-04-24
Release date:2012-05-02
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of Neisserial Azurin
To be Published
3A0O
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Crystal structure of alginate lyase from Agrobacterium tumefaciens C58
Descriptor: CHLORIDE ION, Oligo alginate lyase
Authors:Ochiai, A, Yamasaki, M, Mikami, B, Hashimoto, W, Murata, K.
Deposit date:2009-03-23
Release date:2010-03-31
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Crystal structure of exotype alginate lyase Atu3025 from Agrobacterium tumefaciens
J.Biol.Chem., 285, 2010

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