6EBC
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![BU of 6ebc by Molmil](/molmil-images/mine/6ebc) | OhrB (Organic Hydroperoxide Resistance protein) wild type from Chromobacterium violaceum and reduced by DTT | Descriptor: | 2,3-DIHYDROXY-1,4-DITHIOBUTANE, CHLORIDE ION, Organic hydroperoxide resistance protein | Authors: | Domingos, R.M, Teixeira, R.D, Alegria, T.G.P, Vieira, P.S, Murakami, M.T, Netto, L.E.S. | Deposit date: | 2018-08-06 | Release date: | 2020-02-12 | Last modified: | 2023-10-11 | Method: | X-RAY DIFFRACTION (1.87 Å) | Cite: | Substrate and product-assisted catalysis: molecular aspects behind structural switches along Organic Hydroperoxide Resistance Protein catalytic cycle Acs Catalysis, 2020
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6EBG
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![BU of 6ebg by Molmil](/molmil-images/mine/6ebg) | Ohr (Organic Hydroperoxide Resistance protein) mutant - C60S interacting with dihydrolipoamide | Descriptor: | (6S)-6,8-disulfanyloctanamide, Organic hydroperoxide resistance protein | Authors: | Domingos, R.M, Teixeira, R.D, Alegria, T.G.P, Vieira, P.S, Murakami, M.T, Netto, L.E.S. | Deposit date: | 2018-08-06 | Release date: | 2020-02-05 | Last modified: | 2023-10-11 | Method: | X-RAY DIFFRACTION (2.15 Å) | Cite: | Substrate and product-assisted catalysis: molecular aspects behind structural switches along Organic Hydroperoxide Resistance Protein catalytic cycle Acs Catalysis, 2020
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6EBD
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![BU of 6ebd by Molmil](/molmil-images/mine/6ebd) | OhrB (Organic Hydroperoxide Resistance protein) mutant (C60A) from Chromobacterium violaceum, interacting with dihydrolipoamide | Descriptor: | (6S)-6,8-disulfanyloctanamide, CHLORIDE ION, Organic hydroperoxide resistance protein | Authors: | Domingos, R.M, Teixeira, R.D, Alegria, T.G.P, Vieira, P.S, Murakami, M.T, Netto, L.E.S. | Deposit date: | 2018-08-06 | Release date: | 2020-02-12 | Last modified: | 2023-10-11 | Method: | X-RAY DIFFRACTION (2.61 Å) | Cite: | Substrate and product-assisted catalysis: molecular aspects behind structural switches along Organic Hydroperoxide Resistance Protein catalytic cycle Acs Catalysis, 2020
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6EB4
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![BU of 6eb4 by Molmil](/molmil-images/mine/6eb4) | OhrB (Organic Hydroperoxide Resistance protein) from Chromobacterium violaceum | Descriptor: | DI(HYDROXYETHYL)ETHER, Organic hydroperoxide resistance protein | Authors: | Domingos, R.M, Teixeira, R.D, Alegria, T.G.P, Vieira, P.S, Murakami, M.T, Netto, L.E.S. | Deposit date: | 2018-08-04 | Release date: | 2020-02-05 | Last modified: | 2023-10-11 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | Substrate and product-assisted catalysis: molecular aspects behind structural switches along Organic Hydroperoxide Resistance Protein catalytic cycle Acs Catalysis, 2020
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8D89
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![BU of 8d89 by Molmil](/molmil-images/mine/8d89) | Crystal structure of a novel GH5 enzyme retrieved from capybara gut metagenome | Descriptor: | 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, ACETATE ION, CHLORIDE ION, ... | Authors: | Martins, M.P, Morais, M.A.B, Murakami, M.T. | Deposit date: | 2022-06-08 | Release date: | 2022-11-02 | Last modified: | 2024-05-22 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | Glycoside hydrolase subfamily GH5_57 features a highly redesigned catalytic interface to process complex hetero-beta-mannans. Acta Crystallogr D Struct Biol, 78, 2022
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3GBO
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![BU of 3gbo by Molmil](/molmil-images/mine/3gbo) | Crystal structure of BmooMPalpha-I, a non-hemorrhagic metalloproteinase isolated from Bothrops moojeni snake venom | Descriptor: | CALCIUM ION, ZINC ION, Zinc metalloproteinase BmooMPalfa-I | Authors: | Akao, P.K, Tonoli, C.C.C, Murakami, M.T. | Deposit date: | 2009-02-20 | Release date: | 2009-09-22 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (1.77 Å) | Cite: | Structural studies of BmooMPalpha-I, a non-hemorrhagic metalloproteinase from Bothrops moojeni venom. Toxicon, 55, 2010
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5JVO
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![BU of 5jvo by Molmil](/molmil-images/mine/5jvo) | Crystal structure of the Arginine Repressor from the pathogenic bacterium Corynebacterium pseudotuberculosis | Descriptor: | Arginine repressor, SULFATE ION, TYROSINE | Authors: | Mariutti, R.B, Ullah, A, Murakami, M.T, Arni, R.K. | Deposit date: | 2016-05-11 | Release date: | 2016-08-31 | Last modified: | 2023-09-27 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Tyrosine binding and promiscuity in the arginine repressor from the pathogenic bacterium Corynebacterium pseudotuberculosis. Biochem.Biophys.Res.Commun., 475, 2016
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5KB6
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![BU of 5kb6 by Molmil](/molmil-images/mine/5kb6) | High-resolution structure of the adenosine kinase from Mus musculus in complex with adenosine | Descriptor: | ACETATE ION, ADENOSINE, Adenosine kinase, ... | Authors: | Oliveira, R.R, Neto, R.M, Polo, C.C, Tonoli, C.C.C, Murakami, M.T, Franchini, K.G. | Deposit date: | 2016-06-02 | Release date: | 2017-06-07 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (1.2 Å) | Cite: | High-resolution structure of the adenosine kinase from Mus musculus in complex with adenosine To Be Published
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5KB5
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![BU of 5kb5 by Molmil](/molmil-images/mine/5kb5) | Crystal structure of the adenosine kinase from Mus musculus in complex with adenosine and adenosine-diphosphate | Descriptor: | ADENOSINE, ADENOSINE-5'-DIPHOSPHATE, Adenosine kinase, ... | Authors: | Oliveira, R.R, Neto, R.M, Polo, C.C, Tonoli, C.C.C, Murakami, M.T, Franchini, K.G. | Deposit date: | 2016-06-02 | Release date: | 2017-06-07 | Last modified: | 2023-09-27 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Crystal structure of the adenosine kinase from Mus musculus in complex with adenosine and adenosine-diphosphate To Be Published
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5JGW
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![BU of 5jgw by Molmil](/molmil-images/mine/5jgw) | Crystal structure of maize AKR4C13 in complex with NADP and acetate | Descriptor: | ACETATE ION, Aldose reductase, AKR4C13, ... | Authors: | Santos, M.L, Giuseppe, P.O, Kiyota, E, Sousa, S.M, Schmelz, E.A, Yunes, J.A, Koch, K.E, Murakami, M.T, Aparicio, R. | Deposit date: | 2016-04-20 | Release date: | 2017-05-03 | Last modified: | 2024-03-06 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Crystal structure of maize AKR4C13 in complex with NADP and acetate To Be Published
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5JGY
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![BU of 5jgy by Molmil](/molmil-images/mine/5jgy) | Crystal structure of maize AKR4C13 in P21 space group | Descriptor: | 1,2-ETHANEDIOL, 4-{[(2R,3R,4S,5R)-5-({[(R)-{[(R)-{[(2R,3R,4R,5R)-5-(6-amino-9H-purin-9-yl)-3-hydroxy-4-(phosphonooxy)tetrahydrofuran-2-yl]methoxy}(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]oxy}methyl)-3,4-dihydroxytetrahydrofuran-2-yl]oxy}butanoic acid (non-preferred name), Aldose reductase, ... | Authors: | Santos, M.L, Giuseppe, P.O, Kiyota, E, Sousa, S.M, Schmelz, E.A, Yunes, J.A, Koch, K.E, Murakami, M.T, Aparicio, R. | Deposit date: | 2016-04-20 | Release date: | 2017-05-03 | Method: | X-RAY DIFFRACTION (1.45 Å) | Cite: | Crystal structure of maize AKR4C13 in P21 space group To Be Published
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5JH1
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![BU of 5jh1 by Molmil](/molmil-images/mine/5jh1) | Crystal structure of the apo form of AKR4C7 from maize | Descriptor: | Aldose reductase, AKR4C7 | Authors: | Giuseppe, P.O, Santos, M.L, Sousa, S.M, Koch, K.E, Yunes, J.A, Aparicio, R, Murakami, M.T. | Deposit date: | 2016-04-20 | Release date: | 2016-11-09 | Last modified: | 2023-09-27 | Method: | X-RAY DIFFRACTION (1.45 Å) | Cite: | A comparative structural analysis reveals distinctive features of co-factor binding and substrate specificity in plant aldo-keto reductases. Biochem.Biophys.Res.Commun., 474, 2016
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5JH2
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![BU of 5jh2 by Molmil](/molmil-images/mine/5jh2) | Crystal structure of the holo form of AKR4C7 from maize | Descriptor: | 1,2-ETHANEDIOL, ADENOSINE-2'-5'-DIPHOSPHATE, Aldose reductase, ... | Authors: | Giuseppe, P.O, Santos, M.L, Sousa, S.M, Koch, K.E, Yunes, J.A, Aparicio, R, Murakami, M.T. | Deposit date: | 2016-04-20 | Release date: | 2016-11-09 | Last modified: | 2023-09-27 | Method: | X-RAY DIFFRACTION (1.72 Å) | Cite: | A comparative structural analysis reveals distinctive features of co-factor binding and substrate specificity in plant aldo-keto reductases. Biochem.Biophys.Res.Commun., 474, 2016
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4MDP
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![BU of 4mdp by Molmil](/molmil-images/mine/4mdp) | Crystal structure of a GH1 beta-glucosidase from the fungus Humicola insolens in complex with glucose | Descriptor: | Beta-glucosidase, DI(HYDROXYETHYL)ETHER, GLYCEROL, ... | Authors: | Giuseppe, P.O, Souza, T.A.C.B, Souza, F.H.M, Zanphorlin, L.M, Machado, C.B, Ward, R.J, Jorge, J.A, Furriel, R.P.M, Murakami, M.T. | Deposit date: | 2013-08-23 | Release date: | 2014-06-25 | Last modified: | 2024-02-28 | Method: | X-RAY DIFFRACTION (2.05 Å) | Cite: | Structural basis for glucose tolerance in GH1 beta-glucosidases. Acta Crystallogr.,Sect.D, 70, 2014
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4MDO
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![BU of 4mdo by Molmil](/molmil-images/mine/4mdo) | Crystal structure of a GH1 beta-glucosidase from the fungus Humicola insolens | Descriptor: | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Beta-glucosidase, DI(HYDROXYETHYL)ETHER, ... | Authors: | Giuseppe, P.O, Souza, T.A.C.B, Souza, F.H.M, Zanphorlin, L.M, Machado, C.B, Ward, R.J, Jorge, J.A, Furriel, R.P.M, Murakami, M.T. | Deposit date: | 2013-08-23 | Release date: | 2014-06-25 | Last modified: | 2024-02-28 | Method: | X-RAY DIFFRACTION (2.6 Å) | Cite: | Structural basis for glucose tolerance in GH1 beta-glucosidases. Acta Crystallogr.,Sect.D, 70, 2014
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2KQ5
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![BU of 2kq5 by Molmil](/molmil-images/mine/2kq5) | |
4M1R
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![BU of 4m1r by Molmil](/molmil-images/mine/4m1r) | Structure of a novel cellulase 5 from a sugarcane soil metagenomic library | Descriptor: | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Cellulase 5 | Authors: | Paiva, J.H, Alvarez, T.M, Cairo, J.P, Paixao, D.A, Almeida, R.A, Tonoli, C.C.C, Ruiz, D.M, Ruller, R, Santos, C.R, Squina, F.M, Murakami, M.T. | Deposit date: | 2013-08-03 | Release date: | 2014-02-05 | Last modified: | 2024-02-28 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Structure and function of a novel cellulase 5 from sugarcane soil metagenome. Plos One, 8, 2013
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4NPR
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![BU of 4npr by Molmil](/molmil-images/mine/4npr) | Crystal Structure of the Family 12 Xyloglucanase from Aspergillus niveus | Descriptor: | SULFATE ION, Xyloglucan-specific endo-beta-1,4-glucanase GH12 | Authors: | Cordeiro, R.L, Santos, C.R, Furtado, G.P, Damasio, A.R.L, Polizeli, M.L.T.M, Ward, R.J, Murakami, M.T. | Deposit date: | 2013-11-22 | Release date: | 2014-12-24 | Last modified: | 2023-09-20 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | Crystal Structure of the Family 12 Xyloglucanase from Aspergillus niveus To be Published
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2L8A
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![BU of 2l8a by Molmil](/molmil-images/mine/2l8a) | Structure of a novel CBM3 lacking the calcium-binding site | Descriptor: | Endoglucanase | Authors: | Paiva, J.H, Meza, A.N, Sforca, M.L, Navarro, R.Z, Neves, J.L, Santos, C.R, Murakami, M.T, Zeri, A.C. | Deposit date: | 2011-01-07 | Release date: | 2011-12-21 | Last modified: | 2024-05-01 | Method: | SOLUTION NMR | Cite: | Dissecting structure-function-stability relationships of a thermostable GH5-CBM3 cellulase from Bacillus subtilis 168. Biochem.J., 441, 2012
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4M29
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![BU of 4m29 by Molmil](/molmil-images/mine/4m29) | Structure of a GH39 Beta-xylosidase from Caulobacter crescentus | Descriptor: | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Beta-xylosidase | Authors: | Polo, C.C, Santos, C.R, Correa, J.M, Simao, R.C.G, Seixas, F.A.V, Murakami, M.T. | Deposit date: | 2013-08-05 | Release date: | 2013-08-14 | Last modified: | 2023-09-20 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | Structure of a GH39 Beta-xylosidase from Caulobacter crescentus Thesis
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7UFR
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![BU of 7ufr by Molmil](/molmil-images/mine/7ufr) | Cryo-EM Structure of Bl_Man38A at 2.7 A | Descriptor: | Alpha-mannosidase, ZINC ION | Authors: | Santos, C.R, Cordeiro, R.L, Domingues, M.N, Borges, A.C, de Farias, M.A, Van Heel, M, Murakami, M.T, Portugal, R.V. | Deposit date: | 2022-03-23 | Release date: | 2022-11-16 | Last modified: | 2024-06-12 | Method: | ELECTRON MICROSCOPY (2.7 Å) | Cite: | Cryo-EM Structure of Bl_Man38A at 2.7 A Nat.Chem.Biol., 2022
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7UFU
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![BU of 7ufu by Molmil](/molmil-images/mine/7ufu) | Cryo-EM Structure of Bl_Man38A nucleophile mutant in complex with mannose at 2.7 A | Descriptor: | Alpha-mannosidase, ZINC ION, alpha-D-mannopyranose | Authors: | Santos, C.R, Cordeiro, R.L, Domingues, M.N, Borges, A.C, de Farias, M.A, Van Heel, M, Murakami, M.T, Portugal, R.V. | Deposit date: | 2022-03-23 | Release date: | 2022-11-16 | Last modified: | 2024-06-12 | Method: | ELECTRON MICROSCOPY (2.7 Å) | Cite: | Cryo-EM Structure of Bl_Man38A nucleophile mutant in complex with mannose at 2.7 A Nat.Chem.Biol., 2022
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7UFS
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![BU of 7ufs by Molmil](/molmil-images/mine/7ufs) | Cryo-EM Structure of Bl_Man38B at 3.4 A | Descriptor: | Alpha-mannosidase, ZINC ION | Authors: | Santos, C.R, Cordeiro, R.L, Domingues, M.N, Borges, A.C, de Farias, M.A, Van Heel, M, Murakami, M.T, Portugal, R.V. | Deposit date: | 2022-03-23 | Release date: | 2022-11-16 | Last modified: | 2024-06-12 | Method: | ELECTRON MICROSCOPY (3.4 Å) | Cite: | Cryo-EM Structure of Bl_Man38B at 3.4 A Nat.Chem.Biol., 2022
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7UFT
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![BU of 7uft by Molmil](/molmil-images/mine/7uft) | Cryo-EM Structure of Bl_Man38C at 2.9 A | Descriptor: | Alpha-mannosidase, ZINC ION | Authors: | Santos, C.R, Cordeiro, R.L, Domingues, M.N, Borges, A.C, de Farias, M.A, Van Heel, M, Murakami, M.T, Portugal, R.V. | Deposit date: | 2022-03-23 | Release date: | 2022-11-16 | Last modified: | 2024-06-12 | Method: | ELECTRON MICROSCOPY (2.9 Å) | Cite: | Cryo-EM Structure of Bl_Man38C at 2.9 A Nat.Chem.Biol., 2022
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5WKA
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![BU of 5wka by Molmil](/molmil-images/mine/5wka) | Crystal structure of a GH1 beta-glucosidase retrieved from microbial metagenome of Poraque Amazon lake | Descriptor: | Beta-glucosidase, DI(HYDROXYETHYL)ETHER, GLYCEROL | Authors: | Morais, M.A.B, Toyama, D, Ramos, F.C, Zanphorlin, L.M, Tonoli, C.C.C, Miranda, F.P, Ruller, R, Henrique-Silva, F, Murakami, M.T. | Deposit date: | 2017-07-24 | Release date: | 2018-03-07 | Last modified: | 2023-10-04 | Method: | X-RAY DIFFRACTION (2.75 Å) | Cite: | A novel beta-glucosidase isolated from the microbial metagenome of Lake Poraque (Amazon, Brazil). Biochim. Biophys. Acta, 1866, 2018
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