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PDB: 39 results

1IRU
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BU of 1iru by Molmil
Crystal Structure of the mammalian 20S proteasome at 2.75 A resolution
Descriptor: 20S proteasome, MAGNESIUM ION
Authors:Unno, M, Mizushima, T, Morimoto, Y, Tomisugi, Y, Tanaka, K, Yasuoka, N, Tsukihara, T.
Deposit date:2001-10-24
Release date:2002-05-22
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:The structure of the mammalian 20S proteasome at 2.75 A resolution.
Structure, 10, 2002
1DIO
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BU of 1dio by Molmil
DIOL DEHYDRATASE-CYANOCOBALAMIN COMPLEX FROM KLEBSIELLA OXYTOCA
Descriptor: COBALAMIN, POTASSIUM ION, PROTEIN (DIOL DEHYDRATASE), ...
Authors:Shibata, N, Masuda, J, Tobimatsu, T, Toraya, T, Suto, K, Morimoto, Y, Yasuoka, N.
Deposit date:1999-01-27
Release date:2000-01-30
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A new mode of B12 binding and the direct participation of a potassium ion in enzyme catalysis: X-ray structure of diol dehydratase.
Structure Fold.Des., 7, 1999
2DH6
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BU of 2dh6 by Molmil
Crystal structure of E. coli Apo-TrpB
Descriptor: SULFATE ION, tryptophan synthase beta subunit
Authors:Nishio, K, Morimoto, Y, Ogasahara, K, Yasuoka, N, Yutani, K, Tsukihara, T, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-03-23
Release date:2007-04-24
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3 Å)
Cite:Large conformational changes in the Escherichia coli tryptophan synthase beta(2) subunit upon pyridoxal 5'-phosphate binding
Febs J., 277, 2010
2DH5
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BU of 2dh5 by Molmil
Crystal structure of E. coli Holo-TrpB
Descriptor: GLYCEROL, PYRIDOXAL-5'-PHOSPHATE, SULFATE ION, ...
Authors:Nishio, K, Morimoto, Y, Ogasahara, K, Yutani, K, Tsukihara, T, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-03-23
Release date:2007-04-24
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Large conformational changes in the Escherichia coli tryptophan synthase beta(2) subunit upon pyridoxal 5'-phosphate binding
Febs J., 277, 2010
3WMP
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BU of 3wmp by Molmil
Crystal structure of SLL-2
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-alpha-D-galactopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Kita, A, Jimbo, M, Sakai, R, Morimoto, Y, Miki, K.
Deposit date:2013-11-22
Release date:2015-01-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a symbiosis-related lectin from octocoral.
Glycobiology, 25, 2015
3WMQ
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Crystal structure of the complex between SLL-2 and GalNAc.
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-alpha-D-galactopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Kita, A, Jimbo, M, Sakai, R, Morimoto, Y, Miki, K.
Deposit date:2013-11-22
Release date:2015-01-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of a symbiosis-related lectin from octocoral.
Glycobiology, 25, 2015
3WCQ
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BU of 3wcq by Molmil
Crystal structure analysis of Cyanidioschyzon melorae ferredoxin D58N mutant
Descriptor: FE2/S2 (INORGANIC) CLUSTER, Ferredoxin
Authors:Ueno, Y, Matsumoto, T, Yamano, A, Imai, T, Morimoto, Y.
Deposit date:2013-05-31
Release date:2013-08-07
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (0.97 Å)
Cite:Increasing the electron-transfer ability of Cyanidioschyzon merolae ferredoxin by a one-point mutation - A high resolution and Fe-SAD phasing crystal structure analysis of the Asp58Asn mutant
Biochem.Biophys.Res.Commun., 436, 2013
2E84
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BU of 2e84 by Molmil
Crystal structure of High-Molecular Weight Cytochrome c from Desulfovibrio vulgaris (Miyazaki F) in the presence of zinc ion
Descriptor: High-molecular-weight cytochrome c, PROTOPORPHYRIN IX CONTAINING FE, SODIUM ION, ...
Authors:Shibata, N, Suto, K, Sato, M, Morimoto, Y, Kitamura, M, Higuchi, Y.
Deposit date:2007-01-17
Release date:2008-01-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of High-Molecular Weight Cytochrome c from Desulfovibrio vulgaris (Miyazaki F)
To be Published
2CVC
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BU of 2cvc by Molmil
Crystal structure of High-Molecular Weight Cytochrome c from Desulfovibrio vulgaris (Hildenborough)
Descriptor: HEME C, High-molecular-weight cytochrome c precursor
Authors:Suto, K, Sato, M, Shibata, N, Kitamura, M, Morimoto, Y, Takayama, Y, Ozawa, K, Akutsu, H, Higuchi, Y, Yasuoka, N.
Deposit date:2005-06-02
Release date:2006-06-06
Last modified:2019-10-02
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of High-Molecular Weight Cytochrome c
To be Published
7FG8
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BU of 7fg8 by Molmil
H/D exchanged Hen egg-white lysozyme denatured in acidic conditions and refolded in solution
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION
Authors:Kita, A, Morimoto, Y.
Deposit date:2021-07-26
Release date:2022-02-09
Last modified:2024-10-09
Method:NEUTRON DIFFRACTION (2 Å), X-RAY DIFFRACTION
Cite:Hydrogen/Deuterium Exchange Behavior During Denaturing/Refolding Processes Determined in Tetragonal Hen Egg-White Lysozyme Crystals.
Mol Biotechnol., 64, 2022
7FGV
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BU of 7fgv by Molmil
H/D exchanged Hen egg-white lysozyme denatured in heat condition and refolded in solution
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION
Authors:Kita, A, Morimoto, Y.
Deposit date:2021-07-28
Release date:2022-02-09
Last modified:2024-10-23
Method:NEUTRON DIFFRACTION (2 Å), X-RAY DIFFRACTION
Cite:Hydrogen/Deuterium Exchange Behavior During Denaturing/Refolding Processes Determined in Tetragonal Hen Egg-White Lysozyme Crystals.
Mol Biotechnol., 64, 2022
7FGU
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BU of 7fgu by Molmil
H/D exchanged Hen egg-white lysozyme denatured in basic conditions and refolded in solution
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION
Authors:Kita, A, Morimoto, Y.
Deposit date:2021-07-28
Release date:2022-02-09
Last modified:2024-04-03
Method:NEUTRON DIFFRACTION (2 Å), X-RAY DIFFRACTION
Cite:Hydrogen/Deuterium Exchange Behavior During Denaturing/Refolding Processes Determined in Tetragonal Hen Egg-White Lysozyme Crystals.
Mol Biotechnol., 64, 2022
3AJ9
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BU of 3aj9 by Molmil
X-ray analysis of Crystal of Proteinase K Obtained from D2O Solution Using PEG 8000
Descriptor: CALCIUM ION, GLYCEROL, Proteinase K
Authors:Chatake, T, Ishikawa, T, Morimoto, Y.
Deposit date:2010-05-27
Release date:2011-06-22
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:High-resolution X-ray study of the effects of deuteration on crystal growth and the crystal structure of proteinase K
Acta Crystallogr.,Sect.F, 67, 2011
3AJ8
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BU of 3aj8 by Molmil
X-ray analysis of Crystal of Proteinase K Obtained from H2O Solution Using PEG 8000
Descriptor: CALCIUM ION, GLYCEROL, Proteinase K
Authors:Chatake, T, Ishikawa, T, Morimoto, Y.
Deposit date:2010-05-27
Release date:2011-06-22
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:High-resolution X-ray study of the effects of deuteration on crystal growth and the crystal structure of proteinase K
Acta Crystallogr.,Sect.F, 67, 2011
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