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PDB: 287 results

8GQA
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Crystal structure of lasso peptide epimerase MslH in complexed with precursor peptide analog MslAdeltaW21
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, Poly-gamma-glutamate synthesis protein (Capsule biosynthesis protein), ...
Authors:Nakashima, Y, Morita, H.
Deposit date:2022-08-29
Release date:2023-06-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Structure of lasso peptide epimerase MslH reveals metal-dependent acid/base catalytic mechanism.
Nat Commun, 14, 2023
1UF8
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BU of 1uf8 by Molmil
Crystal structure of C171A/V236A Mutant of N-carbamyl-D-amino acid amidohydrolase complexed with N-carbamyl-D-Phenylalanine
Descriptor: D-[(AMINO)CARBONYL]PHENYLALANINE, N-carbamyl-D-amino acid amidohydrolase
Authors:Hashimoto, H, Aoki, M, Shimizu, T, Nakai, T, Morikawa, H, Ikenaka, Y, Takahashi, S, Sato, M.
Deposit date:2003-05-26
Release date:2004-06-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of C171A/V236A Mutant of N-carbamyl-D-amino acid amidohydrolase
To be published
1UF4
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BU of 1uf4 by Molmil
Crystal structure of C171A/V236A Mutant of N-carbamyl-D-amino acid amidohydrolase
Descriptor: N-carbamyl-D-amino acid amidohydrolase
Authors:Hashimoto, H, Aoki, M, Shimizu, T, Nakai, T, Morikawa, H, Ikenaka, Y, Takahashi, S, Sato, M.
Deposit date:2003-05-23
Release date:2004-06-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure of C171A/V236A Mutant of N-carbamyl-D-amino acid
To be published
1UF7
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BU of 1uf7 by Molmil
Crystal structure of C171A/V236A Mutant of N-carbamyl-D-amino acid amidohydrolase complexed with N-carbamyl-D-valine
Descriptor: 3-METHYL-2-UREIDO-BUTYRIC ACID, N-carbamyl-D-amino acid amidohydrolase
Authors:Hashimoto, H, Aoki, M, Shimizu, T, Nakai, T, Morikawa, H, Ikenaka, Y, Takahashi, S, Sato, M.
Deposit date:2003-05-26
Release date:2004-06-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of C171A/V236A Mutant of N-carbamyl-D-amino acid amidohydrolase
To be published
1UF5
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BU of 1uf5 by Molmil
Crystal structure of C171A/V236A Mutant of N-carbamyl-D-amino acid amidohydrolase complexed with N-carbamyl-D-methionine
Descriptor: 1,2-ETHANEDIOL, 4-METHYLSULFANYL-2-UREIDO-BUTYRIC ACID, N-carbamyl-D-amino acid amidohydrolase
Authors:Hashimoto, H, Aoki, M, Shimizu, T, Nakai, T, Morikawa, H, Ikenaka, Y, Takahashi, S, Sato, M.
Deposit date:2003-05-23
Release date:2004-06-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of C171A/V236A mutant of N-carbamyl-D-amino acid amidohydrolase
To be published
1C9Y
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BU of 1c9y by Molmil
HUMAN ORNITHINE TRANSCARBAMYLASE: CRYSTALLOGRAPHIC INSIGHTS INTO SUBSTRATE RECOGNITION AND CATALYTIC MECHANISM
Descriptor: NORVALINE, ORNITHINE CARBAMOYLTRANSFERASE, PHOSPHORIC ACID MONO(FORMAMIDE)ESTER
Authors:Shi, D, Yu, X, Morizono, H, Tuchman, M, Allewell, N.M.
Deposit date:1999-08-03
Release date:2000-06-06
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of human ornithine transcarbamylase complexed with carbamoyl phosphate and L-norvaline at 1.9 A resolution.
Proteins, 39, 2000
1CG5
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BU of 1cg5 by Molmil
DEOXY FORM HEMOGLOBIN FROM DASYATIS AKAJEI
Descriptor: PROTEIN (HEMOGLOBIN), PROTOPORPHYRIN IX CONTAINING FE
Authors:Chong, K.T, Morimoto, H.
Deposit date:1999-03-26
Release date:1999-04-01
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structures of the deoxy and CO forms of haemoglobin from Dasyatis akajei, a cartilaginous fish.
Acta Crystallogr.,Sect.D, 55, 1999
1CG8
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BU of 1cg8 by Molmil
CO Form Hemoglobin from Dasyatis Akajei
Descriptor: CARBON MONOXIDE, PROTEIN (HEMOGLOBIN), PROTOPORPHYRIN IX CONTAINING FE
Authors:Chong, K.T, Morimoto, H.
Deposit date:1999-03-26
Release date:1999-04-01
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures of the deoxy and CO forms of haemoglobin from Dasyatis akajei, a cartilaginous fish.
Acta Crystallogr.,Sect.D, 55, 1999
1UL1
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BU of 1ul1 by Molmil
Crystal structure of the human FEN1-PCNA complex
Descriptor: Flap endonuclease-1, MAGNESIUM ION, Proliferating cell nuclear antigen
Authors:Sakurai, S, Kitano, K, Yamaguchi, H, Hamada, K, Okada, K, Fukuda, K, Uchida, M, Ohtsuka, E, Morioka, H, Hakoshima, T.
Deposit date:2003-09-05
Release date:2005-03-01
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural basis for recruitment of human flap endonuclease 1 to PCNA
EMBO J., 24, 2005
2R8V
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BU of 2r8v by Molmil
Native structure of N-acetylglutamate synthase from Neisseria gonorrhoeae
Descriptor: ACETYL COENZYME *A, Putative acetylglutamate synthase
Authors:Shi, D, Sagar, V, Jin, Z, Yu, X, Caldovic, L, Morizono, H, Allewell, N.M, Tuchman, M.
Deposit date:2007-09-11
Release date:2008-01-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The crystal structure of N-acetyl-L-glutamate synthase from Neisseria gonorrhoeae provides insights into mechanisms of catalysis and regulation.
J.Biol.Chem., 283, 2008
2R98
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Crystal Structure of N-acetylglutamate synthase (selenoMet substituted) from Neisseria gonorrhoeae
Descriptor: ACETYL COENZYME *A, Putative acetylglutamate synthase
Authors:Shi, D, Sagar, V, Jin, Z, Yu, X, Caldovic, L, Morizono, H, Allewell, N.M, Tuchman, M.
Deposit date:2007-09-12
Release date:2008-01-15
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The crystal structure of N-acetyl-L-glutamate synthase from Neisseria gonorrhoeae provides insights into mechanisms of catalysis and regulation.
J.Biol.Chem., 283, 2008
2EWI
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BU of 2ewi by Molmil
The F20Y mutant of tetraheme cytochrome c3 from Desulfovibrio Vulgaris Miyazaki F
Descriptor: Cytochrome c3, PROTOPORPHYRIN IX CONTAINING FE
Authors:Higuchi, Y, Komori, H, Morita, K.
Deposit date:2005-11-03
Release date:2006-11-28
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (1 Å)
Cite:The F20Y mutant of tetraheme cytochrome c3 from Desulfovibrio Vulgaris
To be Published
2EWU
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BU of 2ewu by Molmil
The F20H mutant of tetraheme cytochrome c3 from Desulfovibrio Vulgaris Miyazaki F
Descriptor: Cytochrome c3, PROTOPORPHYRIN IX CONTAINING FE
Authors:Higuchi, Y, Komori, H, Morita, K.
Deposit date:2005-11-07
Release date:2006-11-28
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:The F20H mutant of tetraheme cytochrome c3 from Desulfovibrio Vulgaris Miyazaki F
To be Published
5AUR
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BU of 5aur by Molmil
Hydrogenobacter thermophilus cytochrome c552 dimer formed by domain swapping at N-terminal region
Descriptor: Cytochrome c-552, HEME C, IODIDE ION
Authors:Ren, C, Nagao, S, Yamanaka, M, Kamikubo, H, Komori, H, Shomura, Y, Higuchi, Y, Hirota, S.
Deposit date:2015-06-08
Release date:2015-10-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.26 Å)
Cite:Oligomerization enhancement and two domain swapping mode detection for thermostable cytochrome c552via the elongation of the major hinge loop.
Mol Biosyst, 11, 2015
4OOQ
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BU of 4ooq by Molmil
apo-dUTPase from Arabidopsis thaliana
Descriptor: Deoxyuridine 5'-triphosphate nucleotidohydrolase, MAGNESIUM ION, SULFATE ION
Authors:Inoguchi, N, Bajaj, M, Moriyama, H.
Deposit date:2014-02-03
Release date:2015-07-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.004 Å)
Cite:Structural insights into the mechanism defining substrate affinity in Arabidopsis thaliana dUTPase: the role of tryptophan 93 in ligand orientation.
BMC Res Notes, 8, 2015
6LFW
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BU of 6lfw by Molmil
Crystal structure of PCB4scFv(hN56D) in complex with PCB#126
Descriptor: 1,2,3-tris(chloranyl)-5-(3-chloranyl-4-methoxy-phenyl)benzene, PCB4scFv(hN56D), SODIUM ION
Authors:Nakamura, T, Yamagata, Y, Morioka, H.
Deposit date:2019-12-03
Release date:2020-12-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:Crystal structure of PCB4scFv(hN56D) in complex with PCB#126
To Be Published
6LCS
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BU of 6lcs by Molmil
Crystal structure of 73MuL9 Fv-clasp fragment in complex with GA-pyridine analogue
Descriptor: (2~{S})-6-[4-(hydroxymethyl)-3-oxidanyl-pyridin-1-ium-1-yl]-2-(phenylmethoxycarbonylamino)hexanoic acid, PHOSPHATE ION, VH-SARAH, ...
Authors:Nakamura, T, Takagi, J, Yamagata, Y, Morioka, H.
Deposit date:2019-11-19
Release date:2020-11-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Molecular recognition of a single-chain Fv antibody specific for GA-pyridine, an advanced glycation end-product (AGE), elucidated using biophysical techniques and synthetic antigen analogues.
J.Biochem., 170, 2021
6LFV
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BU of 6lfv by Molmil
Crystal structure of PCB4scFv(hN56D)
Descriptor: PCB4scFv(hN56D)
Authors:Nakamura, T, Yamagata, Y, Morioka, H.
Deposit date:2019-12-03
Release date:2020-12-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of PCB4scFv(hN56D)
To Be Published
1OTH
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BU of 1oth by Molmil
CRYSTAL STRUCTURE OF HUMAN ORNITHINE TRANSCARBAMOYLASE COMPLEXED WITH N-PHOSPHONACETYL-L-ORNITHINE
Descriptor: N-(PHOSPHONOACETYL)-L-ORNITHINE, PROTEIN (ORNITHINE TRANSCARBAMOYLASE)
Authors:Shi, D, Morizono, H, Ha, Y, Aoyagi, M, Tuchman, N, Allewell, N.M.
Deposit date:1998-10-06
Release date:1999-10-06
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:1.85-A resolution crystal structure of human ornithine transcarbamoylase complexed with N-phosphonacetyl-L-ornithine. Catalytic mechanism and correlation with inherited deficiency.
J.Biol.Chem., 273, 1998
1OSJ
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BU of 1osj by Molmil
STRUCTURE OF 3-ISOPROPYLMALATE DEHYDROGENASE
Descriptor: 3-ISOPROPYLMALATE DEHYDROGENASE
Authors:Qu, C, Akanuma, S, Moriyama, H, Tanaka, N, Oshima, T.
Deposit date:1996-10-22
Release date:1997-01-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:A mutation at the interface between domains causes rearrangement of domains in 3-isopropylmalate dehydrogenase.
Protein Eng., 10, 1997
1OSI
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BU of 1osi by Molmil
STRUCTURE OF 3-ISOPROPYLMALATE DEHYDROGENASE
Descriptor: 3-ISOPROPYLMALATE DEHYDROGENASE
Authors:Qu, C, Akanuma, S, Moriyama, H, Tanaka, N, Oshima, T.
Deposit date:1996-10-22
Release date:1997-01-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3 Å)
Cite:A mutation at the interface between domains causes rearrangement of domains in 3-isopropylmalate dehydrogenase.
Protein Eng., 10, 1997
5F9K
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BU of 5f9k by Molmil
Dictyostelium discoideum dUTPase at 2.2 Angstrom
Descriptor: 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE, Deoxyuridine 5'-triphosphate nucleotidohydrolase, MAGNESIUM ION, ...
Authors:Inoguchi, N, Chia, C.P, Heck, K, Moriyama, H.
Deposit date:2015-12-09
Release date:2016-12-14
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.179 Å)
Cite:Mitochondrial localization of Dictyostelium discoideum dUTPase mediated by its N-terminus.
Bmc Res Notes, 13, 2020
1XAC
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CHIMERA ISOPROPYLMALATE DEHYDROGENASE BETWEEN BACILLUS SUBTILIS (M) AND THERMUS THERMOPHILUS (T) FROM N-TERMINAL: 20% T MIDDLE 20% M RESIDUAL 60% T, MUTATED AT S82R. LOW TEMPERATURE (100K) STRUCTURE.
Descriptor: 3-ISOPROPYLMALATE DEHYDROGENASE 2T2M6T S82R
Authors:Nagata, C, Moriyama, H, Tanaka, N.
Deposit date:1995-11-09
Release date:1996-04-03
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Cryocrystallography of 3-Isopropylmalate dehydrogenase from Thermus thermophilus and its chimeric enzyme.
Acta Crystallogr.,Sect.D, 52, 1996
1XAD
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BU of 1xad by Molmil
CHIMERA ISOPROPYLMALATE DEHYDROGENASE BETWEEN BACILLUS SUBTILIS (M) AND THERMUS THERMOPHILUS (T) FROM N-TERMINAL: 20% T MIDDLE 20% M RESIDUAL 60% T, MUTATED AT S82R. LOW TEMPERATURE (150K) STRUCTURE.
Descriptor: 3-ISOPROPYLMALATE DEHYDROGENASE 2T2M6T S82R
Authors:Nagata, C, Moriyama, H, Tanaka, N.
Deposit date:1995-11-09
Release date:1996-04-03
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Cryocrystallography of 3-Isopropylmalate dehydrogenase from Thermus thermophilus and its chimeric enzyme.
Acta Crystallogr.,Sect.D, 52, 1996
2FMY
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BU of 2fmy by Molmil
CO-dependent transcription factor CooA from Carboxydothermus hydrogenoformans (Imidazole-bound form)
Descriptor: IMIDAZOLE, PROTOPORPHYRIN IX CONTAINING FE, carbon monoxide oxidation system transcription regulator CooA-1
Authors:Higuchi, Y, Komori, H.
Deposit date:2006-01-10
Release date:2007-01-16
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of CO-sensing Transcription Activator CooA Bound to Exogenous Ligand Imidazole
J.Mol.Biol., 367, 2007

224004

数据于2024-08-21公开中

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