Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 285 results

4OOP
DownloadVisualize
BU of 4oop by Molmil
Arabidopsis thaliana dUTPase with with magnesium and alpha,beta-imido-dUTP
Descriptor: 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE, Deoxyuridine 5'-triphosphate nucleotidohydrolase, MAGNESIUM ION
Authors:Inoguchi, N, Bajaj, M, Moriyama, H.
Deposit date:2014-02-03
Release date:2015-04-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural insights into the mechanism defining substrate affinity in Arabidopsis thaliana dUTPase: the role of tryptophan 93 in ligand orientation.
BMC Res Notes, 8, 2015
1GC8
DownloadVisualize
BU of 1gc8 by Molmil
THE CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS 3-ISOPROPYLMALATE DEHYDROGENASE MUTATED AT 172TH FROM ALA TO PHE
Descriptor: 3-ISOPROPYLMALATE DEHYDROGENASE
Authors:Qu, C, Akanuma, S, Tanaka, N, Moriyama, H, Oshima, T.
Deposit date:2000-07-27
Release date:2000-09-27
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Design, X-ray crystallography, molecular modelling and thermal stability studies of mutant enzymes at site 172 of 3-isopropylmalate dehydrogenase from Thermus thermophilus.
Acta Crystallogr.,Sect.D, 57, 2001
1V4W
DownloadVisualize
BU of 1v4w by Molmil
Crystal structure of bluefin tuna hemoglobin deoxy form at pH7.5
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, hemoglobin alpha chain, hemoglobin beta chain
Authors:Yokoyama, T, Chong, K.T, Miyazaki, Y, Nakatsukasa, T, Unzai, S, Miyazaki, G, Morimoto, H, Jeremy, R.H.T, Park, S.Y.
Deposit date:2003-11-19
Release date:2004-07-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Novel Mechanisms of pH Sensitivity in Tuna Hemoglobin: A STRUCTURAL EXPLANATION OF THE ROOT EFFECT
J.Biol.Chem., 279, 2004
1GCW
DownloadVisualize
BU of 1gcw by Molmil
CO form hemoglobin from mustelus griseus
Descriptor: CARBON MONOXIDE, PROTEIN (HEMOGLOBIN), PROTOPORPHYRIN IX CONTAINING FE
Authors:Naoi, Y, Chong, K.T, Yoshimatsu, K, Miyazaki, G, Tame, J.R.H, Park, S.Y, Adachi, S.I, Morimoto, H.
Deposit date:2000-08-08
Release date:2000-09-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:The functional similarity and structural diversity of human and cartilaginous fish hemoglobins.
J.Mol.Biol., 307, 2001
1EIE
DownloadVisualize
BU of 1eie by Molmil
CRYSTAL STRUCTURE OF F120W MUTANT OF BOVINE PANCREATIC RIBONUCLEASE A
Descriptor: RIBONUCLEASE A
Authors:Chatani, E, Hayashi, R, Moriyama, H, Ueki, T.
Deposit date:2000-02-25
Release date:2002-02-13
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Conformational strictness required for maximum activity and stability of bovine pancreatic ribonuclease A as revealed by crystallographic study of three Phe120 mutants at 1.4 A resolution.
Protein Sci., 11, 2002
1EP9
DownloadVisualize
BU of 1ep9 by Molmil
HUMAN ORNITHINE TRANSCARBAMYLASE: CRYSTALLOGRAPHIC INSIGHTS INTO SUBSTRATE RECOGNITION AND CONFORMATIONAL CHANGE
Descriptor: ORNITHINE TRANSCARBAMYLASE, PHOSPHORIC ACID MONO(FORMAMIDE)ESTER
Authors:Shi, D, Morizono, H, Yu, X, Allewell, N.M, Tuchman, M.
Deposit date:2000-03-28
Release date:2001-04-04
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Human ornithine transcarbamylase: crystallographic insights into substrate recognition and conformational changes.
Biochem.J., 354, 2001
1XAB
DownloadVisualize
BU of 1xab by Molmil
3-ISOPROPYLMALATE DEHYDROGENASE, LOW TEMPERATURE (150K) STRUCTURE
Descriptor: 3-ISOPROPYLMALATE DEHYDROGENASE
Authors:Nagata, C, Moriyama, H, Tanaka, N.
Deposit date:1995-11-09
Release date:1996-04-03
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Cryocrystallography of 3-Isopropylmalate dehydrogenase from Thermus thermophilus and its chimeric enzyme.
Acta Crystallogr.,Sect.D, 52, 1996
1XAA
DownloadVisualize
BU of 1xaa by Molmil
3-ISOPROPYLMALATE DEHYDROGENASE, LOW TEMPERATURE (100K) STRUCTURE
Descriptor: 3-ISOPROPYLMALATE DEHYDROGENASE
Authors:Nagata, C, Moriyama, H, Tanaka, N.
Deposit date:1995-11-09
Release date:1996-04-03
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Cryocrystallography of 3-Isopropylmalate dehydrogenase from Thermus thermophilus and its chimeric enzyme.
Acta Crystallogr.,Sect.D, 52, 1996
1V4U
DownloadVisualize
BU of 1v4u by Molmil
Crystal structure of bluefin tuna carbonmonoxy-hemoglobin
Descriptor: CARBON MONOXIDE, PROTOPORPHYRIN IX CONTAINING FE, hemoglobin alpha chain, ...
Authors:Yokoyama, T, Chong, K.T, Miyazaki, Y, Nakatsukasa, T, Unzai, S, Miyazaki, G, Morimoto, H, Jeremy, R.H.T, Park, S.Y.
Deposit date:2003-11-19
Release date:2004-07-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Novel Mechanisms of pH Sensitivity in Tuna Hemoglobin: A STRUCTURAL EXPLANATION OF THE ROOT EFFECT
J.Biol.Chem., 279, 2004
1GC9
DownloadVisualize
BU of 1gc9 by Molmil
THE CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS 3-ISOPROPYLMALATE DEHYDROGENASE MUTATED AT 172TH FROM ALA TO GLY
Descriptor: 3-ISOPROPYLMALATE DEHYDROGENASE
Authors:Qu, C, Akanuma, S, Tanaka, N, Moriyama, H, Oshima, T.
Deposit date:2000-07-28
Release date:2000-09-27
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Design, X-ray crystallography, molecular modelling and thermal stability studies of mutant enzymes at site 172 of 3-isopropylmalate dehydrogenase from Thermus thermophilus.
Acta Crystallogr.,Sect.D, 57, 2001
1V4X
DownloadVisualize
BU of 1v4x by Molmil
Crystal structure of bluefin tuna hemoglobin deoxy form at pH5.0
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, hemoglobin alpha chain, hemoglobin beta chain
Authors:Yokoyama, T, Chong, K.T, Miyazaki, Y, Nakatsukasa, T, Unzai, S, Miyazaki, G, Morimoto, H, Jeremy, R.H.T, Park, S.Y.
Deposit date:2003-11-19
Release date:2004-07-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Novel Mechanisms of pH Sensitivity in Tuna Hemoglobin: A STRUCTURAL EXPLANATION OF THE ROOT EFFECT
J.Biol.Chem., 279, 2004
1GCV
DownloadVisualize
BU of 1gcv by Molmil
DEOXY FORM HEMOGLOBIN FROM MUSTELUS GRISEUS
Descriptor: HEMOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE
Authors:Naoi, Y, Chong, K.T, Yoshimatsu, K, Miyazaki, G, Tame, J.R.H, Park, S.Y, Adachi, S.I, Morimoto, H.
Deposit date:2000-08-08
Release date:2000-08-31
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:The functional similarity and structural diversity of human and cartilaginous fish hemoglobins.
J.Mol.Biol., 307, 2001
6ICH
DownloadVisualize
BU of 6ich by Molmil
Grb2 SH2 domain in domain swapped dimer form
Descriptor: Growth factor receptor-bound protein 2
Authors:Hosoe, Y, Numoto, N, Inaba, S, Ogawa, S, Morii, H, Abe, R, Ito, N, Oda, M.
Deposit date:2018-09-06
Release date:2019-07-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and functional properties of Grb2 SH2 dimer in CD28 binding.
Biophys Physicobio., 16, 2019
6LFX
DownloadVisualize
BU of 6lfx by Molmil
Crystal structure of PCB4scFv(hN56D) in complex with PCB#77
Descriptor: 1,2-bis(chloranyl)-4-(3-chloranyl-4-methoxy-phenyl)benzene, PCB4scFv(hN56D)
Authors:Nakamura, T, Yamagata, Y, Morioka, H.
Deposit date:2019-12-03
Release date:2020-12-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Crystal structure of PCB4scFv(hN56D) in complex with PCB#77
To Be Published
2YYW
DownloadVisualize
BU of 2yyw by Molmil
The F20M mutant of tetraheme cytochrome c3 from Desulfovibrio Vulgaris Miyazaki F
Descriptor: Cytochrome c3, PROTOPORPHYRIN IX CONTAINING FE
Authors:Higuchi, Y, Komori, H.
Deposit date:2007-05-02
Release date:2008-05-06
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Structures of Noncoordinated Aromatic Residue Mutants in Tetraheme Cytochrome c3 from Desulfovibrio vulgaris Miyazaki F
To be Published
2YYX
DownloadVisualize
BU of 2yyx by Molmil
The Y65A mutant of tetraheme cytochrome c3 from Desulfovibrio Vulgaris Miyazaki F
Descriptor: Cytochrome c3, PROTOPORPHYRIN IX CONTAINING FE
Authors:Higuchi, Y, Komori, H.
Deposit date:2007-05-02
Release date:2008-05-06
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1 Å)
Cite:Structures of Noncoordinated Aromatic Residue Mutants in Tetraheme Cytochrome c3 from Desulfovibrio vulgaris Miyazaki F
To be Published
1IZQ
DownloadVisualize
BU of 1izq by Molmil
F46V mutant of bovine pancreatic ribonuclease A
Descriptor: RIBONUCLEASE A
Authors:Kadonosono, T, Chatani, E, Hayashi, R, Moriyama, H, Ueki, T.
Deposit date:2002-10-11
Release date:2003-11-25
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Minimization of cavity size ensures protein stability and folding: structures of Phe46-replaced bovine pancreatic RNase A
Biochemistry, 42, 2003
1IZR
DownloadVisualize
BU of 1izr by Molmil
F46A mutant of bovine pancreatic ribonuclease A
Descriptor: RIBONUCLEASE A
Authors:Kadonosono, T, Chatani, E, Hayashi, R, Moriyama, H, Ueki, T.
Deposit date:2002-10-11
Release date:2003-11-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Minimization of cavity size ensures protein stability and folding: structures of Phe46-replaced bovine pancreatic RNase A
Biochemistry, 42, 2003
1IZP
DownloadVisualize
BU of 1izp by Molmil
F46L mutant of bovine pancreatic ribonuclease A
Descriptor: RIBONUCLEASE A
Authors:Kadonosono, T, Chatani, E, Hayashi, R, Moriyama, H, Ueki, T.
Deposit date:2002-10-11
Release date:2003-11-25
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Minimization of cavity size ensures protein stability and folding: structures of Phe46-replaced bovine pancreatic RNase A
Biochemistry, 42, 2003
1IDM
DownloadVisualize
BU of 1idm by Molmil
3-ISOPROPYLMALATE DEHYDROGENASE, LOOP-DELETED CHIMERA
Descriptor: 3-ISOPROPYLMALATE DEHYDROGENASE
Authors:Sakurai, M, Ohzeki, M, Moriyama, H, Sato, M, Tanaka, N.
Deposit date:1995-05-19
Release date:1995-09-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of a loop-deleted variant of 3-isopropylmalate dehydrogenase from Thermus thermophilus: an internal reprieve tolerance mechanism.
Acta Crystallogr.,Sect.D, 52, 1996
4H2L
DownloadVisualize
BU of 4h2l by Molmil
Deer mouse hemoglobin in hydrated format
Descriptor: Alpha-globin, Beta globin, PROTOPORPHYRIN IX CONTAINING FE
Authors:Inoguchi, N, Oshlo, J.R, Natarajan, C, Weber, R.E, Fago, A, Storz, J.F, Moriyama, H.
Deposit date:2012-09-12
Release date:2013-04-10
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.779 Å)
Cite:Deer mouse hemoglobin exhibits a lowered oxygen affinity owing to mobility of the E helix.
Acta Crystallogr.,Sect.F, 69, 2013
1J1J
DownloadVisualize
BU of 1j1j by Molmil
Crystal Structure of human Translin
Descriptor: Translin
Authors:Sugiura, I, Sasaki, C, Hasegawa, T, Kohno, T, Sugio, S, Moriyama, H, Kasai, M, Matsuzaki, T.
Deposit date:2002-12-06
Release date:2003-12-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of human translin at 2.2 A resolution.
Acta Crystallogr.,Sect.D, 60, 2004
2Z47
DownloadVisualize
BU of 2z47 by Molmil
The Y66L mutant of tetraheme cytochrome c3 from Desulfovibrio Vulgaris Miyazaki F
Descriptor: Cytochrome c3, HEME C
Authors:Higuchi, Y, Komori, H.
Deposit date:2007-06-13
Release date:2008-06-17
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structures of Noncoordinated Aromatic Residue Mutants in Tetraheme Cytochrome c3 from Desulfovibrio vulgaris Miyazaki F
To be Published
1JS1
DownloadVisualize
BU of 1js1 by Molmil
Crystal Structure of a new transcarbamylase from the anaerobic bacterium Bacteroides fragilis at 2.0 A resolution
Descriptor: PHOSPHATE ION, Transcarbamylase
Authors:Shi, D, Gallegos, R, DePonte III, J, Morizono, H, Yu, X, Allewell, N.M, Malamy, M, Tuchman, M.
Deposit date:2001-08-15
Release date:2002-07-17
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a transcarbamylase-like protein from the anaerobic bacterium Bacteroides fragilis at 2.0 A resolution.
J.Mol.Biol., 320, 2002
2YXC
DownloadVisualize
BU of 2yxc by Molmil
The H25M mutant of tetraheme cytochrome c3 from Desulfovibrio Vulgaris Miyazaki F
Descriptor: Cytochrome c3, PROTOPORPHYRIN IX CONTAINING FE
Authors:Higuchi, Y, Komori, H.
Deposit date:2007-04-26
Release date:2008-04-29
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Strategic roles of axial histidines in structure formation and redox regulation of tetraheme cytochrome c3.
Biochemistry, 47, 2008

226707

数据于2024-10-30公开中

PDB statisticsPDBj update infoContact PDBjnumon