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PDB: 287 件

2PC5
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BU of 2pc5 by Molmil
Native crystal structure analysis on Arabidopsis dUTPase
分子名称: DUTP pyrophosphatase-like protein, MAGNESIUM ION
著者Moriyama, H, Bajaj, M.
登録日2007-03-29
公開日2008-02-12
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Purification, crystallization and preliminary crystallographic analysis of deoxyuridine triphosphate nucleotidohydrolase from Arabidopsis thaliana.
Acta Crystallogr.,Sect.F, 63, 2007
3UAD
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BU of 3uad by Molmil
Multicopper Oxidase CueO mutant C500SE506Q (data5)
分子名称: ACETATE ION, Blue copper oxidase CueO, COPPER (II) ION, ...
著者Komori, H, Kataoka, K, Sakurai, T, Higuchi, Y.
登録日2011-10-21
公開日2012-04-11
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献An O-centered structure of the trinuclear copper center in the Cys500Ser/Glu506Gln mutant of CueO and structural changes in low to high X-ray dose conditions.
Angew.Chem.Int.Ed.Engl., 51, 2012
4NER
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BU of 4ner by Molmil
Multicopper Oxidase CueO (data1)
分子名称: Blue copper oxidase CueO, COPPER (II) ION, HYDROXIDE ION, ...
著者Komori, H, Kataoka, K, Sakurai, T, Higuchi, Y.
登録日2013-10-30
公開日2014-03-12
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献New insights into the catalytic active-site structure of multicopper oxidases.
Acta Crystallogr.,Sect.D, 70, 2014
4HAL
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Multicopper Oxidase CueO mutant E506I
分子名称: ACETATE ION, Blue copper oxidase CueO, COPPER (II) ION, ...
著者Komori, H, Kataoka, K, Sakurai, T, Higuchi, Y.
登録日2012-09-26
公開日2013-10-30
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Multicopper Oxidase CueO mutant E506I
TO BE PUBLISHED
3A5Q
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BU of 3a5q by Molmil
Benzalacetone synthase from Rheum palmatum
分子名称: Benzalacetone synthase
著者Morita, H, Kato, R, Abe, I, Sugio, S, Kohno, T.
登録日2009-08-10
公開日2010-01-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A structure-based mechanism for benzalacetone synthase from Rheum palmatum
Proc.Natl.Acad.Sci.USA, 107, 2010
3A5S
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BU of 3a5s by Molmil
Benzalacetone synthase (I207L/L208F)
分子名称: Benzalacetone synthase
著者Morita, H, Kato, R, Abe, I, Sugio, S, Kohno, T.
登録日2009-08-10
公開日2010-01-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A structure-based mechanism for benzalacetone synthase from Rheum palmatum
Proc.Natl.Acad.Sci.USA, 107, 2010
3ALE
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BU of 3ale by Molmil
A type III polyketide synthase that produces diarylheptanoid
分子名称: Os07g0271500 protein
著者Morita, H, Kato, R, Sugio, S, Abe, I.
登録日2010-08-03
公開日2010-11-03
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis for the one-pot formation of the diarylheptanoid scaffold by curcuminoid synthase from Oryza sativa
Proc.Natl.Acad.Sci.USA, 107, 2010
4HAK
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BU of 4hak by Molmil
Multicopper Oxidase CueO mutant E506A
分子名称: ACETATE ION, Blue copper oxidase CueO, COPPER (II) ION, ...
著者Komori, H, Kataoka, K, Sakurai, T, Higuchi, Y.
登録日2012-09-26
公開日2013-10-30
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Multicopper Oxidase CueO mutant E506A
TO BE PUBLISHED
3A5R
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BU of 3a5r by Molmil
Benzalacetone synthase from Rheum palmatum complexed with 4-coumaroyl-primed monoketide intermediate
分子名称: 4'-HYDROXYCINNAMIC ACID, Benzalacetone synthase
著者Morita, H, Kato, R, Abe, I, Sugio, S, Kohno, T.
登録日2009-08-10
公開日2010-01-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献A structure-based mechanism for benzalacetone synthase from Rheum palmatum
Proc.Natl.Acad.Sci.USA, 107, 2010
1IQU
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BU of 1iqu by Molmil
Crystal structure of photolyase-thymine complex
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, PHOSPHATE ION, THYMINE, ...
著者Komori, H, Masui, R, Kuramitsu, S, Yokoyama, S, Shibata, T, Inoue, Y, Miki, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2001-08-03
公開日2002-05-08
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of thermostable DNA photolyase: pyrimidine-dimer recognition mechanism.
Proc.Natl.Acad.Sci.USA, 98, 2001
1IQR
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Crystal structure of DNA photolyase from Thermus thermophilus
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, PHOSPHATE ION, photolyase
著者Komori, H, Masui, R, Kuramitsu, S, Yokoyama, S, Shibata, T, Inoue, Y, Miki, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2001-07-27
公開日2001-11-28
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of thermostable DNA photolyase: pyrimidine-dimer recognition mechanism.
Proc.Natl.Acad.Sci.USA, 98, 2001
7EIX
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BU of 7eix by Molmil
Human histidine decarboxylase mutant Y334F
分子名称: Histidine decarboxylase, PYRIDOXAL-5'-PHOSPHATE, SULFATE ION
著者Komori, H.
登録日2021-04-01
公開日2022-04-06
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural analysis of the HDC Y334F mutant
J Biol Macromol, 21, 2021
7EIY
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BU of 7eiy by Molmil
Human histidine decarboxylase mutant Y334F soaking with histidine
分子名称: HISTIDINE, Histidine decarboxylase, PYRIDOXAL-5'-PHOSPHATE, ...
著者Komori, H.
登録日2021-04-01
公開日2022-04-06
最終更新日2023-04-19
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural analysis of the HDC Y334F mutant
J Biol Macromol, 21, 2021
7EIW
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BU of 7eiw by Molmil
Human histidine decarboxylase mutant Y334F reacted with histidine
分子名称: Histidine decarboxylase, PYRIDOXAL-5'-PHOSPHATE
著者Komori, H.
登録日2021-04-01
公開日2022-04-06
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural analysis of the HDC Y334F mutant
J Biol Macromol, 21, 2021
7FFG
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Diarylpentanoid-producing polyketide synthase (N199F mutant)
分子名称: Type III polyketide synthase
著者Morita, H, Wong, C.P, Liu, Q, Kodama, T, Lee, Y, Nakashima, Y.
登録日2021-07-23
公開日2022-01-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Identification of a diarylpentanoid-producing polyketide synthase revealing an unusual biosynthetic pathway of 2-(2-phenylethyl)chromones in agarwood.
Nat Commun, 13, 2022
7FFA
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Diarylpentanoid-producing polyketide synthase from Aquilaria sinensis
分子名称: Type III polyketide synthase
著者Morita, H, Wong, C.P, Liu, Q, Kodama, T, Lee, Y, Nakashima, Y.
登録日2021-07-23
公開日2022-01-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Identification of a diarylpentanoid-producing polyketide synthase revealing an unusual biosynthetic pathway of 2-(2-phenylethyl)chromones in agarwood.
Nat Commun, 13, 2022
7FFI
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BU of 7ffi by Molmil
Diarylpentanoid-producing polyketide synthase (F340W mutant)
分子名称: Type III polyketide synthase
著者Morita, H, Wong, C.P, Liu, Q, Kodama, T, Lee, Y, Nakashima, Y.
登録日2021-07-23
公開日2022-01-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Identification of a diarylpentanoid-producing polyketide synthase revealing an unusual biosynthetic pathway of 2-(2-phenylethyl)chromones in agarwood.
Nat Commun, 13, 2022
7FFC
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BU of 7ffc by Molmil
Diarylpentanoid-producing polyketide synthase (A210E mutant)
分子名称: GLYCEROL, Type III polyketide synthase
著者Morita, H, Wong, C.P, Liu, Q, Kodama, T, Lee, Y, Nakashima, Y.
登録日2021-07-23
公開日2022-01-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献Identification of a diarylpentanoid-producing polyketide synthase revealing an unusual biosynthetic pathway of 2-(2-phenylethyl)chromones in agarwood.
Nat Commun, 13, 2022
7FFH
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BU of 7ffh by Molmil
Diarylpentanoid-producing polyketide synthase (N199L mutant)
分子名称: Type III polyketide synthase
著者Morita, H, Wong, C.P, Liu, Q, Takeshi, K, Lee, Y, Nakashima, Y.
登録日2021-07-23
公開日2022-01-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Identification of a diarylpentanoid-producing polyketide synthase revealing an unusual biosynthetic pathway of 2-(2-phenylethyl)chromones in agarwood.
Nat Commun, 13, 2022
3AWK
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BU of 3awk by Molmil
Crystal structure of the polyketide synthase 1 from huperzia serrata
分子名称: Chalcone synthase-like polyketide synthase, GLYCEROL, SULFATE ION
著者Morita, H, Kondo, S, Kato, R, Sugio, S, Kohno, T, Abe, I.
登録日2011-03-23
公開日2011-08-31
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Synthesis of unnatural alkaloid scaffolds by exploiting plant polyketide synthase.
Proc.Natl.Acad.Sci.USA, 108, 2011
3AWJ
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BU of 3awj by Molmil
Crystal structure of the Huperzia serrata polyketide synthase 1 complexed with CoA-SH
分子名称: COENZYME A, Chalcone synthase-like polyketide synthase, SULFATE ION
著者Morita, H, Kondo, S, Kato, R, Sugio, S, Kohno, T, Abe, I.
登録日2011-03-23
公開日2011-08-31
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Synthesis of unnatural alkaloid scaffolds by exploiting plant polyketide synthase.
Proc.Natl.Acad.Sci.USA, 108, 2011
2ZWN
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BU of 2zwn by Molmil
Crystal structure of the novel two-domain type laccase from a metagenome
分子名称: CHLORIDE ION, COPPER (II) ION, CU-O-CU LINKAGE, ...
著者Komori, H, Miyazaki, K, Higuchi, Y.
登録日2008-12-17
公開日2009-04-07
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献X-ray structure of a two-domain type laccase: a missing link in the evolution of multi-copper proteins
Febs Lett., 583, 2009
5XHU
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Crystal structure of ycgT from bacillus subtilis
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Ferredoxin--NADP reductase
著者Komori, H.
登録日2017-04-24
公開日2018-05-02
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of ycgT from bacillus subtilis
To Be Published
5GQI
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BU of 5gqi by Molmil
Crystal structure of Cypovirus Polyhedra mutant with deletion of Ala194
分子名称: 1,2-ETHANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, ...
著者Abe, S, Tabe, H, Ijiri, H, Yamashita, K, Hirata, K, Mori, H, Ueno, T.
登録日2016-08-07
公開日2017-02-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Crystal Engineering of Self-Assembled Porous Protein Materials in Living Cells
ACS Nano, 11, 2017
5GQJ
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Crystal structure of Cypovirus Polyhedra mutant with deletion of Ser193 and Ala194
分子名称: 1,2-ETHANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, ...
著者Abe, S, Tabe, H, Ijiri, H, Yamashita, K, Hirata, K, Mori, H, Ueno, T.
登録日2016-08-07
公開日2017-02-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal Engineering of Self-Assembled Porous Protein Materials in Living Cells
ACS Nano, 11, 2017

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件を2024-08-21に公開中

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