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PDB: 287 件
7XVJ
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BU of 7xvj by Molmil
Crystal structure of CdpNPT in complex with harmol
分子名称: 1-methyl-9~{H}-pyrido[3,4-b]indol-7-ol, Cyclic dipeptide N-prenyltransferase, PHOSPHATE ION
著者Nakashima, Y, Morita, H.
登録日2022-05-24
公開日2023-04-05
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Enzymatic formation of a prenyl beta-carboline by a fungal indole prenyltransferase.
J Nat Med, 76, 2022
3C3I
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BU of 3c3i by Molmil
Evolution of chlorella virus dUTPase
分子名称: DEOXYURIDINE-5'-DIPHOSPHATE, Deoxyuridine triphosphatase, MAGNESIUM ION
著者Yamanishi, M, Homma, K, Zhang, Y, Etten, L.V.J, Moriyama, H.
登録日2008-01-28
公開日2009-02-10
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystallization and crystal-packing studies of Chlorella virus deoxyuridine triphosphatase.
Acta Crystallogr.,Sect.F, 65, 2009
2YXW
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BU of 2yxw by Molmil
The deletion mutant of Multicopper Oxidase CueO
分子名称: Blue copper oxidase cueO, COPPER (II) ION, CU-O-CU LINKAGE, ...
著者Higuchi, Y, Komori, H.
登録日2007-04-27
公開日2008-01-01
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure and function of the engineered multicopper oxidase CueO from Escherichia coli--deletion of the methionine-rich helical region covering the substrate-binding site
J.Mol.Biol., 373, 2007
3X39
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BU of 3x39 by Molmil
Domain-swapped dimer of Pseudomonas aeruginosa cytochrome c551
分子名称: Cytochrome c-551, HEME C
著者Nagao, S, Ueda, M, Osuka, H, Komori, H, Kamikubo, H, Kataoka, M, Higuchi, Y, Hirota, S.
登録日2015-01-16
公開日2015-04-22
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Domain-Swapped Dimer of Pseudomonas aeruginosa Cytochrome c551: Structural Insights into Domain Swapping of Cytochrome c Family Proteins
Plos One, 10, 2015
2YXV
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BU of 2yxv by Molmil
The deletion mutant of Multicopper Oxidase CueO
分子名称: Blue copper oxidase cueO, COPPER (II) ION, CU-O-CU LINKAGE, ...
著者Higuchi, Y, Komori, H.
登録日2007-04-27
公開日2008-01-01
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Structure and function of the engineered multicopper oxidase CueO from Escherichia coli--deletion of the methionine-rich helical region covering the substrate-binding site
J.Mol.Biol., 373, 2007
3B8G
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BU of 3b8g by Molmil
Crysta structure of N-acetylglutamate synthase from Neisseria gonorrhoeae complexed with coenzyme A and N-acetyl-glutamate
分子名称: COENZYME A, N-ACETYL-L-GLUTAMATE, Putative acetylglutamate synthase
著者Shi, D, Sagar, V, Jin, Z, Yu, X, Caldovic, L, Morizono, H, Allewell, N.M, Tuchman, M.
登録日2007-11-01
公開日2008-01-15
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献The crystal structure of N-acetyl-L-glutamate synthase from Neisseria gonorrhoeae provides insights into mechanisms of catalysis and regulation.
J.Biol.Chem., 283, 2008
3B0M
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BU of 3b0m by Molmil
M175K mutant of assimilatory nitrite reductase (Nii3) from tobbaco leaf
分子名称: CHLORIDE ION, IRON/SULFUR CLUSTER, Nitrite reductase, ...
著者Nakano, S, Takahashi, M, Sakamoto, A, Morikawa, H, Katayanagi, K.
登録日2011-06-10
公開日2012-02-22
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure-function relationship of assimilatory nitrite reductases from the leaf and root of tobacco based on high resolution structures
Protein Sci., 21, 2012
3B0N
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BU of 3b0n by Molmil
Q448K mutant of assimilatory nitrite reductase (Nii3) from tobbaco leaf
分子名称: CHLORIDE ION, IRON/SULFUR CLUSTER, Nitrite reductase, ...
著者Nakano, S, Takahashi, M, Sakamoto, A, Morikawa, H, Katayanagi, K.
登録日2011-06-10
公開日2012-02-22
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure-function relationship of assimilatory nitrite reductases from the leaf and root of tobacco based on high resolution structures
Protein Sci., 21, 2012
3B0G
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BU of 3b0g by Molmil
Assimilatory nitrite reductase (Nii3) from tobbaco leaf
分子名称: CHLORIDE ION, IRON/SULFUR CLUSTER, Nitrite reductase, ...
著者Nakano, S, Takahashi, M, Sakamoto, A, Morikawa, H, Katayanagi, K.
登録日2011-06-09
公開日2012-02-22
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Structure-function relationship of assimilatory nitrite reductases from the leaf and root of tobacco based on high resolution structures
Protein Sci., 21, 2012
3B0L
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BU of 3b0l by Molmil
M175G mutant of assimilatory nitrite reductase (Nii3) from tobbaco leaf
分子名称: CHLORIDE ION, IRON/SULFUR CLUSTER, Nitrite reductase, ...
著者Nakano, S, Takahashi, M, Sakamoto, A, Morikawa, H, Katayanagi, K.
登録日2011-06-10
公開日2012-02-22
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure-function relationship of assimilatory nitrite reductases from the leaf and root of tobacco based on high resolution structures
Protein Sci., 21, 2012
3B0J
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BU of 3b0j by Molmil
M175E mutant of assimilatory nitrite reductase (Nii3) from tobbaco leaf
分子名称: CHLORIDE ION, IRON/SULFUR CLUSTER, Nitrite reductase, ...
著者Nakano, S, Takahashi, M, Sakamoto, A, Morikawa, H, Katayanagi, K.
登録日2011-06-10
公開日2012-02-22
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure-function relationship of assimilatory nitrite reductases from the leaf and root of tobacco based on high resolution structures
Protein Sci., 21, 2012
3B0H
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BU of 3b0h by Molmil
Assimilatory nitrite reductase (Nii4) from tobbaco root
分子名称: CHLORIDE ION, IRON/SULFUR CLUSTER, Nitrite reductase, ...
著者Nakano, S, Takahashi, M, Sakamoto, A, Morikawa, H, Katayanagi, K.
登録日2011-06-09
公開日2012-02-22
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.306 Å)
主引用文献Structure-function relationship of assimilatory nitrite reductases from the leaf and root of tobacco based on high resolution structures
Protein Sci., 21, 2012
3C2T
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BU of 3c2t by Molmil
Evolution of chlorella virus dUTPase
分子名称: DEOXYURIDINE-5'-DIPHOSPHATE, Deoxyuridine triphosphatase, MAGNESIUM ION
著者Yamanishi, M, Homma, K, Zhang, Y, Etten, L.V.J, Moriyama, H.
登録日2008-01-25
公開日2009-02-24
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystallization and crystal-packing studies of Chlorella virus deoxyuridine triphosphatase.
Acta Crystallogr.,Sect.F, 65, 2009
2CMM
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BU of 2cmm by Molmil
STRUCTURAL ANALYSIS OF THE MYOGLOBIN RECONSTITUTED WITH IRON PORPHINE
分子名称: CYANIDE ION, MYOGLOBIN, PORPHYRIN FE(III)
著者Sato, T, Tanaka, N, Moriyama, H, Igarashi, N, Neya, S, Funasaki, N, Iizuka, T, Shiro, Y.
登録日1993-12-24
公開日1994-01-31
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural analysis of the myoglobin reconstituted with iron porphine.
J.Biol.Chem., 268, 1993
5WX4
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BU of 5wx4 by Molmil
Alkylquinolone synthase from Evodia rutaecarpa
分子名称: alkylquinolone synthase
著者Matsui, T, Kodama, T, Tadakoshi, T, Morita, H.
登録日2017-01-06
公開日2017-04-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.203 Å)
主引用文献2-Alkylquinolone alkaloid biosynthesis in the medicinal plant Evodia rutaecarpa involves collaboration of two novel type III polyketide synthases
J. Biol. Chem., 292, 2017
5WX5
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BU of 5wx5 by Molmil
Alkylquinolone synthase Y215V mutant from Evodia rutaecarpa
分子名称: Alkylquinolone synthase
著者Matsui, T, Kodama, T, Tadakoshi, T, Morita, H.
登録日2017-01-06
公開日2017-04-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.058 Å)
主引用文献2-Alkylquinolone alkaloid biosynthesis in the medicinal plant Evodia rutaecarpa involves collaboration of two novel type III polyketide synthases
J. Biol. Chem., 292, 2017
5WX7
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BU of 5wx7 by Molmil
Alkyldiketide-CoA synthase W332G mutant from Evodia rutaecarpa
分子名称: Alkyldiketide-CoA synthase, COENZYME A, SULFATE ION
著者Matsui, T, Kodama, T, Tadakoshi, T, Morita, H.
登録日2017-01-06
公開日2017-04-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.904 Å)
主引用文献2-Alkylquinolone alkaloid biosynthesis in the medicinal plant Evodia rutaecarpa involves collaboration of two novel type III polyketide synthases
J. Biol. Chem., 292, 2017
5WX3
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BU of 5wx3 by Molmil
Alkyldiketide-CoA synthase from Evodia rutaecarpa
分子名称: Alkyldiketide-CoA synthase, COENZYME A, SULFATE ION
著者Matsui, T, Kodama, T, Tadakoshi, T, Morita, H.
登録日2017-01-06
公開日2017-04-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.801 Å)
主引用文献2-Alkylquinolone alkaloid biosynthesis in the medicinal plant Evodia rutaecarpa involves collaboration of two novel type III polyketide synthases
J. Biol. Chem., 292, 2017
5WX6
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BU of 5wx6 by Molmil
Alkyldiketide-CoA synthase W332Q mutant from Evodia rutaecarpa
分子名称: Alkyldiketide-CoA synthase, COENZYME A, SULFATE ION
著者Matsui, T, Kodama, T, Tadakoshi, T, Morita, H.
登録日2017-01-06
公開日2017-04-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.799 Å)
主引用文献2-Alkylquinolone alkaloid biosynthesis in the medicinal plant Evodia rutaecarpa involves collaboration of two novel type III polyketide synthases
J. Biol. Chem., 292, 2017
3VYM
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BU of 3vym by Molmil
Dimeric Hydrogenobacter thermophilus cytochrome c552
分子名称: Cytochrome c-552, HEME C
著者Hayashi, Y, Nagao, S, Osuka, H, Komori, H, Higuchi, Y, Hirota, S.
登録日2012-09-28
公開日2012-11-07
最終更新日2017-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Domain Swapping of the Heme and N-Terminal alpha-Helix in Hydrogenobacter thermophilus Cytochrome c(552) Dimer
Biochemistry, 51, 2012
3WVR
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BU of 3wvr by Molmil
Structure of ATP grasp protein with AMP
分子名称: ADENOSINE MONOPHOSPHATE, GLYCEROL, PGM1, ...
著者Matsui, T, Noike, M, Ooya, K, Sasaki, I, Hamano, Y, Maruyama, C, Ishikawa, J, Satoh, Y, Ito, H, Dairi, T, Morita, H.
登録日2014-06-04
公開日2014-11-19
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.175 Å)
主引用文献A peptide ligase and the ribosome cooperate to synthesize the peptide pheganomycin.
Nat.Chem.Biol., 11, 2015
3WVQ
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BU of 3wvq by Molmil
Structure of ATP grasp protein
分子名称: GLYCEROL, PGM1, SULFATE ION
著者Matsui, T, Noike, M, Ooya, K, Sasaki, I, Hamano, Y, Maruyama, C, Ishikawa, J, Satoh, Y, Ito, H, Dairi, T, Morita, H.
登録日2014-06-04
公開日2014-11-19
最終更新日2014-12-31
実験手法X-RAY DIFFRACTION (1.955 Å)
主引用文献A peptide ligase and the ribosome cooperate to synthesize the peptide pheganomycin.
Nat.Chem.Biol., 11, 2015
3WC8
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BU of 3wc8 by Molmil
Dimeric horse cytochrome c obtained by refolding with desalting method
分子名称: Cytochrome c, DI(HYDROXYETHYL)ETHER, HEME C, ...
著者Parui, P.P, Deshpande, M.S, Nagao, S, Kamikubo, H, Komori, H, Higuchi, Y, Kataoka, M, Hirota, S.
登録日2013-05-25
公開日2013-12-11
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Formation of Oligomeric Cytochrome c during Folding by Intermolecular Hydrophobic Interaction between N- and C-Terminal alpha-Helices
Biochemistry, 52, 2013
3WUI
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BU of 3wui by Molmil
Dimeric horse cytochrome c formed by refolding from molten globule state
分子名称: Cytochrome c, DI(HYDROXYETHYL)ETHER, HEME C, ...
著者Deshpande, M.S, Parui, P.P, Kamikubo, H, Yamanaka, M, Nagao, S, Komori, H, Kataoka, M, Higuchi, Y, Hirota, S.
登録日2014-04-25
公開日2014-07-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Formation of domain-swapped oligomer of cytochrome C from its molten globule state oligomer.
Biochemistry, 53, 2014
1VGJ
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BU of 1vgj by Molmil
Crystal structure of 2'-5' RNA ligase from Pyrococcus horikoshii
分子名称: Hypothetical protein PH0099
著者Yao, M, Morita, H, Okada, A, Tanaka, I.
登録日2004-04-27
公開日2005-06-07
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献The structure of Pyrococcus horikoshii 2'-5' RNA ligase at 1.94 A resolution reveals a possible open form with a wider active-site cleft
ACTA CRYSTALLOGR.,SECT.F, 62, 2006

224004

件を2024-08-21に公開中

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