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PDB: 285 件
4YZJ
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Crystal structure of selnomethionin-labeled indole prenyltransferase TleC
分子名称: Tryptophan dimethylallyltransferase
著者Mori, T, Matsui, T, Morita, H, Abe, I.
登録日2015-03-25
公開日2016-03-16
最終更新日2020-02-05
実験手法X-RAY DIFFRACTION (2.106 Å)
主引用文献Manipulation of prenylation reactions by structure-based engineering of bacterial indolactam prenyltransferases.
Nat Commun, 7, 2016
2IPC
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BU of 2ipc by Molmil
Crystal structure of the translocation ATPase SecA from Thermus thermophilus reveals a parallel, head-to-head dimer
分子名称: Preprotein translocase SecA subunit
著者Vassylyev, D.G, Mori, H, Vassylyeva, M.N, Tsukazaki, T, Kimura, Y, Tahirov, T.H, Ito, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-10-12
公開日2006-11-28
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal Structure of the Translocation ATPase SecA from Thermus thermophilus Reveals a Parallel, Head-to-Head Dimer.
J.Mol.Biol., 364, 2006
4YZK
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BU of 4yzk by Molmil
Crystal structure of the indole prenyltransferase TleC apo structure
分子名称: Tryptophan dimethylallyltransferase
著者Mori, T, Morita, H, Abe, I.
登録日2015-03-25
公開日2016-03-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Manipulation of prenylation reactions by structure-based engineering of bacterial indolactam prenyltransferases.
Nat Commun, 7, 2016
4YZL
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Crystal structure of the indole prenyltransferase TleC complexed with indolactam V and DMSPP
分子名称: (2S,5S)-5-(hydroxymethyl)-1-methyl-2-(propan-2-yl)-1,2,4,5,6,8-hexahydro-3H-[1,4]diazonino[7,6,5-cd]indol-3-one, DIMETHYLALLYL S-THIOLODIPHOSPHATE, Tryptophan dimethylallyltransferase
著者Mori, T, Morita, H, Abe, I.
登録日2015-03-25
公開日2016-03-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.096 Å)
主引用文献Manipulation of prenylation reactions by structure-based engineering of bacterial indolactam prenyltransferases.
Nat Commun, 7, 2016
5GQN
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BU of 5gqn by Molmil
Crystal structure of in cellulo Cypovirus Polyhedra mutant with deletion of Gly192-Ala194
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Polyhedrin
著者Abe, S, Tabe, H, Ijiri, H, Yamashita, K, Hirata, K, Mori, H, Ueno, T.
登録日2016-08-07
公開日2017-02-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Crystal Engineering of Self-Assembled Porous Protein Materials in Living Cells
ACS Nano, 11, 2017
3WD7
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Type III polyketide synthase
分子名称: COENZYME A, NICKEL (II) ION, SULFATE ION, ...
著者Mori, T, Shimokawa, Y, Matsui, T, Kato, R, Sugio, S, Morita, H, Abe, I.
登録日2013-06-10
公開日2013-09-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Cloning, characterization, and crystal structure analysis of novel type III polyketide synthases from Citrus microcarpa
To be Published
3WD8
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BU of 3wd8 by Molmil
TypeIII polyketide synthases
分子名称: GLYCEROL, Type III polyketide synthase quinolone synthase
著者Mori, T, Shimokawa, Y, Matsui, T, Morita, H, Abe, I.
登録日2013-06-10
公開日2013-09-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.463 Å)
主引用文献Cloning, characterization, and crystal structure analysis of novel type III polyketide synthases from Citrus microcarpa
To be Published
2RKB
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BU of 2rkb by Molmil
Serine dehydratase like-1 from human cancer cells
分子名称: POTASSIUM ION, PYRIDOXAL-5'-PHOSPHATE, Serine dehydratase-like
著者Yamada, T, Komoto, J, Kasuya, T, Mori, H, Ogawa, H, Takusagawa, F.
登録日2007-10-16
公開日2008-04-01
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献A catalytic mechanism that explains a low catalytic activity of serine dehydratase like-1 from human cancer cells: Crystal structure and site-directed mutagenesis studies.
Biochim.Biophys.Acta, 1780, 2008
3X27
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Structure of McbB in complex with tryptophan
分子名称: Cucumopine synthase, TRYPTOPHAN
著者Mori, T, Sahashi, S, Morita, H, Abe, I.
登録日2014-12-10
公開日2015-10-28
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.481 Å)
主引用文献Structural Basis for beta-Carboline Alkaloid Production by the Microbial Homodimeric Enzyme McbB
Chem.Biol., 22, 2015
3WXZ
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BU of 3wxz by Molmil
The structure of the I375F mutant of CsyB
分子名称: Putative uncharacterized protein csyB
著者Mori, T, Yang, D, Matsui, T, Morita, H, Fujii, I, Abe, I.
登録日2014-08-13
公開日2015-01-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.303 Å)
主引用文献Structural basis for the formation of acylalkylpyrones from two beta-ketoacyl units by the fungal type III polyketide synthase CsyB.
J.Biol.Chem., 290, 2015
3WY0
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The I375W mutant of CsyB complexed with CoA-SH
分子名称: COENZYME A, Putative uncharacterized protein csyB
著者Mori, T, Yang, D, Matsui, T, Morita, H, Fujii, I, Abe, I.
登録日2014-08-13
公開日2015-01-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.001 Å)
主引用文献Structural basis for the formation of acylalkylpyrones from two beta-ketoacyl units by the fungal type III polyketide synthase CsyB.
J.Biol.Chem., 290, 2015
3WXY
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BU of 3wxy by Molmil
Crystal structure of CsyB complexed with CoA-SH
分子名称: COENZYME A, Putative uncharacterized protein csyB
著者Mori, T, Yang, D, Matsui, T, Morita, H, Fujii, I, Abe, I.
登録日2014-08-13
公開日2015-01-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.706 Å)
主引用文献Structural basis for the formation of acylalkylpyrones from two beta-ketoacyl units by the fungal type III polyketide synthase CsyB.
J.Biol.Chem., 290, 2015
8H25
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BU of 8h25 by Molmil
Lacticaseibacillus casei GH35 beta-galactosidase LBCZ_0230
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Beta-galactosidase, DI(HYDROXYETHYL)ETHER, ...
著者Saburi, W, Ota, T, Kato, K, Tagami, T, Yamashita, K, Yao, M, Mori, H.
登録日2022-10-04
公開日2023-08-16
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.295 Å)
主引用文献Function and Structure of Lacticaseibacillus casei GH35 beta-Galactosidase LBCZ_0230 with High Hydrolytic Activity to Lacto- N -biose I and Galacto- N -biose.
J Appl Glycosci (1999), 70, 2023
2BEC
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BU of 2bec by Molmil
Crystal structure of CHP2 in complex with its binding region in NHE1 and insights into the mechanism of pH regulation
分子名称: Calcineurin B homologous protein 2, Sodium/hydrogen exchanger 1, YTTRIUM (III) ION
著者Ben Ammar, Y, Takeda, S, Hisamitsu, T, Mori, H, Wakabayashi, S.
登録日2005-10-24
公開日2006-06-27
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of CHP2 complexed with NHE1-cytosolic region and an implication for pH regulation
Embo J., 25, 2006
1WRK
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BU of 1wrk by Molmil
Crystal structure of the N-terminal domain of human cardiac troponin C in complex with trifluoperazine (orthrombic crystal form)
分子名称: 10-[3-(4-METHYL-PIPERAZIN-1-YL)-PROPYL]-2-TRIFLUOROMETHYL-10H-PHENOTHIAZINE, CALCIUM ION, Troponin C, ...
著者Takeda, S, Igarashi, T, Oishi, Y, Mori, H.
登録日2004-10-20
公開日2006-01-24
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Crystal structure of the N-terminal domain of human cardiac troponin C in complex with trifluoperazine
To be Published
1WE5
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BU of 1we5 by Molmil
Crystal Structure of Alpha-Xylosidase from Escherichia coli
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Putative family 31 glucosidase yicI
著者Ose, T, Kitamura, M, Okuyama, M, Mori, H, Kimura, A, Watanabe, N, Yao, M, Tanaka, I.
登録日2004-05-24
公開日2005-02-15
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal Structure of Alpha-Xylosidase from Escherichia coli
TO BE PUBLISHED
1WRL
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BU of 1wrl by Molmil
Crystal structure of the N-terminal domain of human cardiac troponin C in complex with trifluoperazine (monoclinic crystal form)
分子名称: 10-[3-(4-METHYL-PIPERAZIN-1-YL)-PROPYL]-2-TRIFLUOROMETHYL-10H-PHENOTHIAZINE, CALCIUM ION, Troponin C, ...
著者Takeda, S, Igarashi, T, Oishi, Y, Mori, H.
登録日2004-10-20
公開日2006-01-24
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of the N-terminal domain of human cardiac troponin C in complex with trifluoperazine
To be Published
8IDS
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BU of 8ids by Molmil
Crystal structure of Bacillus sp. AHU2216 GH13_31 Alpha-glucosidase E256Q/N258P in complex with maltotriose
分子名称: Alpha-glucosidase, CALCIUM ION, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Auiewiriyanukul, W, Saburi, W, Yu, J, Kato, K, Yao, M, Mori, H.
登録日2023-02-14
公開日2023-05-03
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Alteration of Substrate Specificity and Transglucosylation Activity of GH13_31 alpha-Glucosidase from Bacillus sp. AHU2216 through Site-Directed Mutagenesis of Asn258 on beta → alpha Loop 5.
Molecules, 28, 2023
8IBK
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BU of 8ibk by Molmil
Crystal structure of Bacillus sp. AHU2216 GH13_31 Alpha-glucosidase E256Q/N258G in complex with maltotriose
分子名称: Alpha-glucosidase, CALCIUM ION, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Auiewiriyanukul, W, Saburi, W, Yu, J, Kato, K, Yao, M, Mori, H.
登録日2023-02-10
公開日2023-05-03
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Alteration of Substrate Specificity and Transglucosylation Activity of GH13_31 alpha-Glucosidase from Bacillus sp. AHU2216 through Site-Directed Mutagenesis of Asn258 on beta → alpha Loop 5.
Molecules, 28, 2023
1X03
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BU of 1x03 by Molmil
Crystal structure of endophilin BAR domain
分子名称: SH3-containing GRB2-like protein 2
著者Masuda, M, Takeda, S, Sone, M, Kamioka, Y, Mori, H, Mochizuki, N.
登録日2005-03-14
公開日2006-05-02
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Endophilin BAR domain drives membrane curvature by two newly identified structure-based mechanisms
Embo J., 25, 2006
2ZJS
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BU of 2zjs by Molmil
Crystal Structure of SecYE translocon from Thermus thermophilus with a Fab fragment
分子名称: Fab56 (heavy chain), Fab56 (light chain), Preprotein translocase SecE subunit, ...
著者Tsukazaki, T, Mori, H, Fukai, S, Ishitani, R, Perederina, A, Vassylyev, D.G, Ito, K, Nureki, O.
登録日2008-03-08
公開日2008-10-14
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Conformational transition of Sec machinery inferred from bacterial SecYE structures
Nature, 455, 2008
1X04
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BU of 1x04 by Molmil
Crystal structure of endophilin BAR domain (mutant)
分子名称: SH3-containing GRB2-like protein 2
著者Masuda, M, Takeda, S, Sone, M, Kamioka, Y, Mori, H, Mochizuki, N.
登録日2005-03-14
公開日2006-05-02
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Endophilin BAR domain drives membrane curvature by two newly identified structure-based mechanisms
Embo J., 25, 2006
5YRB
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BU of 5yrb by Molmil
Crystal Structure of Oxidized Cypovirus Polyhedra R13A/E73C/Y83C/S193C/A194C Mutant
分子名称: 1,2-ETHANEDIOL, Polyhedrin
著者Negishi, H, Abe, S, Yamashita, K, Hirata, K, Niwase, K, Boudes, M, Coulibaly, F, Mori, H, Ueno, T.
登録日2017-11-09
公開日2018-02-21
最終更新日2018-03-07
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Supramolecular protein cages constructed from a crystalline protein matrix
Chem. Commun. (Camb.), 54, 2018
5YRA
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Crystal Structure of Cypovirus Polyhedra R13A/S193C/A194C Mutant
分子名称: 1,2-ETHANEDIOL, Polyhedrin
著者Negishi, H, Abe, S, Yamashita, K, Hirata, K, Niwase, K, Boudes, M, Coulibaly, F, Mori, H, Ueno, T.
登録日2017-11-09
公開日2018-02-21
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Supramolecular protein cages constructed from a crystalline protein matrix
Chem. Commun. (Camb.), 54, 2018
5YRC
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BU of 5yrc by Molmil
Crystal Structure of Oxidized Cypovirus Polyhedra R13A/E73C/Y83C Mutant
分子名称: 1,2-ETHANEDIOL, Polyhedrin
著者Negishi, H, Abe, S, Yamashita, K, Hirata, K, Niwase, K, Boudes, M, Coulibaly, F, Mori, H, Ueno, T.
登録日2017-11-09
公開日2018-02-21
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献Supramolecular protein cages constructed from a crystalline protein matrix
Chem. Commun. (Camb.), 54, 2018

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