Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 285 件

3L3F
DownloadVisualize
BU of 3l3f by Molmil
Crystal structure of a PFU-PUL domain pair of Saccharomyces cerevisiae Doa1/Ufd3
分子名称: Protein DOA1
著者Komori, H, Nishimasu, R, Kuno, T, Higuchi, Y.
登録日2009-12-16
公開日2010-11-24
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal Structure of a PFU-PUL Domain Pair of Saccharomyces Cerevisiae Doa1/Ufd3
KOBE J.MED.SCI., 56, 2010
3LZX
DownloadVisualize
BU of 3lzx by Molmil
Crystal structure of ferredoxin-NADP+ oxidoreductase from Bacillus subtilis (FORM II)
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Ferredoxin--NADP reductase 2, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
著者Komori, H, Seo, D, Sakurai, T, Higuchi, Y.
登録日2010-03-02
公開日2010-12-08
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure analysis of Bacillus subtilis ferredoxin-NADP(+) oxidoreductase and the structural basis for its substrate selectivity
Protein Sci., 19, 2010
3LZW
DownloadVisualize
BU of 3lzw by Molmil
Crystal structure of ferredoxin-NADP+ oxidoreductase from bacillus subtilis (form I)
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Ferredoxin--NADP reductase 2, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
著者Komori, H, Seo, D, Sakurai, T, Higuchi, Y.
登録日2010-03-02
公開日2010-12-08
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure analysis of Bacillus subtilis ferredoxin-NADP(+) oxidoreductase and the structural basis for its substrate selectivity
Protein Sci., 19, 2010
1OWN
DownloadVisualize
BU of 1own by Molmil
DATA3:DNA photolyase / received X-rays dose 4.8 exp15 photons/mm2
分子名称: Deoxyribodipyrimidine photolyase, FLAVIN-ADENINE DINUCLEOTIDE, PHOSPHATE ION
著者Komori, H, Adachi, S, Miki, K, Eker, A, Kort, R.
登録日2003-03-28
公開日2004-04-13
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献DNA apophotolyase from Anacystis nidulans: 1.8 A structure, 8-HDF reconstitution and X-ray-induced FAD reduction.
Acta Crystallogr.,Sect.D, 60, 2004
1OWP
DownloadVisualize
BU of 1owp by Molmil
DATA6:photoreduced DNA pholyase / received X-rays dose 4.8 exp15 photons/mm2
分子名称: Deoxyribodipyrimidine photolyase, FLAVIN-ADENINE DINUCLEOTIDE, PHOSPHATE ION
著者Komori, H, Adachi, S, Miki, K, Eker, A, Kort, R.
登録日2003-03-28
公開日2004-04-13
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献DNA apophotolyase from Anacystis nidulans: 1.8 A structure, 8-HDF reconstitution and X-ray-induced FAD reduction.
Acta Crystallogr.,Sect.D, 60, 2004
1OWO
DownloadVisualize
BU of 1owo by Molmil
DATA4:photoreduced DNA photolyase / received X-rays dose 1.2 exp15 photons/mm2
分子名称: Deoxyribodipyrimidine photolyase, FLAVIN-ADENINE DINUCLEOTIDE, PHOSPHATE ION
著者Komori, H, Adachi, S, Miki, K, Eker, A, Kort, R.
登録日2003-03-28
公開日2004-04-13
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献DNA apophotolyase from Anacystis nidulans: 1.8 A structure, 8-HDF reconstitution and X-ray-induced FAD reduction.
Acta Crystallogr.,Sect.D, 60, 2004
1OWM
DownloadVisualize
BU of 1owm by Molmil
DATA1:DNA photolyase / received X-rays dose 1.2 exp15 photons/mm2
分子名称: Deoxyribodipyrimidine photolyase, FLAVIN-ADENINE DINUCLEOTIDE, PHOSPHATE ION
著者Komori, H, Adachi, S, Miki, K, Eker, A, Kort, R.
登録日2003-03-28
公開日2004-04-13
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献DNA apophotolyase from Anacystis nidulans: 1.8 A structure, 8-HDF reconstitution and X-ray-induced FAD reduction.
Acta Crystallogr.,Sect.D, 60, 2004
1REP
DownloadVisualize
BU of 1rep by Molmil
CRYSTAL STRUCTURE OF REPLICATION INITIATOR PROTEIN REPE54 OF MINI-F PLASMID COMPLEXED WITH AN ITERON DNA
分子名称: DNA (5'-D(*CP*CP*TP*GP*TP*GP*AP*CP*AP*AP*AP*TP*TP*GP*CP*CP*CP*TP*CP*AP*GP*T)-3'), DNA (5'-D(*CP*TP*GP*AP*GP*GP*GP*CP*AP*AP*TP*TP*TP*GP*TP*CP*AP*CP*AP*GP*GP*T)-3'), MAGNESIUM ION, ...
著者Komori, H, Matsunaga, F, Higuchi, Y, Ishiai, M, Wada, C, Miki, K.
登録日1999-04-29
公開日2000-02-09
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of a prokaryotic replication initiator protein bound to DNA at 2.6 A resolution.
EMBO J., 18, 1999
1OWL
DownloadVisualize
BU of 1owl by Molmil
Structure of apophotolyase from Anacystis nidulans
分子名称: Deoxyribodipyrimidine photolyase, FLAVIN-ADENINE DINUCLEOTIDE, PHOSPHATE ION
著者Komori, H, Adachi, S, Miki, K, Eker, A, Kort, R.
登録日2003-03-28
公開日2004-04-13
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献DNA apophotolyase from Anacystis nidulans: 1.8 A structure, 8-HDF reconstitution and X-ray-induced FAD reduction.
Acta Crystallogr.,Sect.D, 60, 2004
2PC5
DownloadVisualize
BU of 2pc5 by Molmil
Native crystal structure analysis on Arabidopsis dUTPase
分子名称: DUTP pyrophosphatase-like protein, MAGNESIUM ION
著者Moriyama, H, Bajaj, M.
登録日2007-03-29
公開日2008-02-12
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Purification, crystallization and preliminary crystallographic analysis of deoxyuridine triphosphate nucleotidohydrolase from Arabidopsis thaliana.
Acta Crystallogr.,Sect.F, 63, 2007
1WUZ
DownloadVisualize
BU of 1wuz by Molmil
Structure of EC1 domain of CNR
分子名称: Pcdha4 protein
著者Morishita, H, Umitsu, M, Yamaguchi, T, Murata, Y, Shibata, N, Udaka, K, Higuchi, Y, Akutsu, H, Yagi, T, Ikegami, T.
登録日2004-12-09
公開日2005-12-13
最終更新日2024-10-09
実験手法SOLUTION NMR
主引用文献Structural diversity of the first cadherin domains revealed by the structure of CNR/Protocadherin alpha
To be Published
7FFC
DownloadVisualize
BU of 7ffc by Molmil
Diarylpentanoid-producing polyketide synthase (A210E mutant)
分子名称: GLYCEROL, Type III polyketide synthase
著者Morita, H, Wong, C.P, Liu, Q, Kodama, T, Lee, Y, Nakashima, Y.
登録日2021-07-23
公開日2022-01-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献Identification of a diarylpentanoid-producing polyketide synthase revealing an unusual biosynthetic pathway of 2-(2-phenylethyl)chromones in agarwood.
Nat Commun, 13, 2022
2D3M
DownloadVisualize
BU of 2d3m by Molmil
Pentaketide chromone synthase complexed with coenzyme A
分子名称: COENZYME A, pentaketide chromone synthase
著者Morita, H, Kondo, S, Oguro, S, Noguchi, H, Sugio, S, Abe, I, Kohno, T.
登録日2005-09-29
公開日2006-10-24
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural Insight into Chain-Length Control and Product Specificity of Pentaketide Chromone Synthase from Aloe arborescens
Chem.Biol., 14, 2007
4E1O
DownloadVisualize
BU of 4e1o by Molmil
Human histidine decarboxylase complex with Histidine methyl ester (HME)
分子名称: HISTIDINE-METHYL-ESTER, Histidine decarboxylase, PYRIDOXAL-5'-PHOSPHATE
著者Komori, H, Nitta, Y, Ueno, H, Higuchi, Y.
登録日2012-03-06
公開日2012-07-18
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural study reveals that Ser-354 determines substrate specificity on human histidine decarboxylase
J.Biol.Chem., 287, 2012
4NER
DownloadVisualize
BU of 4ner by Molmil
Multicopper Oxidase CueO (data1)
分子名称: Blue copper oxidase CueO, COPPER (II) ION, HYDROXIDE ION, ...
著者Komori, H, Kataoka, K, Sakurai, T, Higuchi, Y.
登録日2013-10-30
公開日2014-03-12
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献New insights into the catalytic active-site structure of multicopper oxidases.
Acta Crystallogr.,Sect.D, 70, 2014
7EIY
DownloadVisualize
BU of 7eiy by Molmil
Human histidine decarboxylase mutant Y334F soaking with histidine
分子名称: HISTIDINE, Histidine decarboxylase, PYRIDOXAL-5'-PHOSPHATE, ...
著者Komori, H.
登録日2021-04-01
公開日2022-04-06
最終更新日2023-04-19
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural analysis of the HDC Y334F mutant
J Biol Macromol, 21, 2021
7FFH
DownloadVisualize
BU of 7ffh by Molmil
Diarylpentanoid-producing polyketide synthase (N199L mutant)
分子名称: Type III polyketide synthase
著者Morita, H, Wong, C.P, Liu, Q, Takeshi, K, Lee, Y, Nakashima, Y.
登録日2021-07-23
公開日2022-01-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Identification of a diarylpentanoid-producing polyketide synthase revealing an unusual biosynthetic pathway of 2-(2-phenylethyl)chromones in agarwood.
Nat Commun, 13, 2022
7FFA
DownloadVisualize
BU of 7ffa by Molmil
Diarylpentanoid-producing polyketide synthase from Aquilaria sinensis
分子名称: Type III polyketide synthase
著者Morita, H, Wong, C.P, Liu, Q, Kodama, T, Lee, Y, Nakashima, Y.
登録日2021-07-23
公開日2022-01-19
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Identification of a diarylpentanoid-producing polyketide synthase revealing an unusual biosynthetic pathway of 2-(2-phenylethyl)chromones in agarwood.
Nat Commun, 13, 2022
7FFG
DownloadVisualize
BU of 7ffg by Molmil
Diarylpentanoid-producing polyketide synthase (N199F mutant)
分子名称: Type III polyketide synthase
著者Morita, H, Wong, C.P, Liu, Q, Kodama, T, Lee, Y, Nakashima, Y.
登録日2021-07-23
公開日2022-01-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Identification of a diarylpentanoid-producing polyketide synthase revealing an unusual biosynthetic pathway of 2-(2-phenylethyl)chromones in agarwood.
Nat Commun, 13, 2022
7FFI
DownloadVisualize
BU of 7ffi by Molmil
Diarylpentanoid-producing polyketide synthase (F340W mutant)
分子名称: Type III polyketide synthase
著者Morita, H, Wong, C.P, Liu, Q, Kodama, T, Lee, Y, Nakashima, Y.
登録日2021-07-23
公開日2022-01-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Identification of a diarylpentanoid-producing polyketide synthase revealing an unusual biosynthetic pathway of 2-(2-phenylethyl)chromones in agarwood.
Nat Commun, 13, 2022
4EF3
DownloadVisualize
BU of 4ef3 by Molmil
Multicopper Oxidase CueO (Citrate buffer)
分子名称: Blue copper oxidase CueO, CITRIC ACID, COPPER (II) ION, ...
著者Komori, H, Kataoka, K, Sakurai, T, Higuchi, Y.
登録日2012-03-29
公開日2013-05-22
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Exogenous acetate ion reaches the type II copper centre in CueO through the water-excretion channel and potentially affects the enzymatic activity.
Acta Crystallogr.,Sect.F, 72, 2016
4HAL
DownloadVisualize
BU of 4hal by Molmil
Multicopper Oxidase CueO mutant E506I
分子名称: ACETATE ION, Blue copper oxidase CueO, COPPER (II) ION, ...
著者Komori, H, Kataoka, K, Sakurai, T, Higuchi, Y.
登録日2012-09-26
公開日2013-10-30
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Multicopper Oxidase CueO mutant E506I
TO BE PUBLISHED
4E9V
DownloadVisualize
BU of 4e9v by Molmil
Multicopper Oxidase mgLAC (data1)
分子名称: CHLORIDE ION, COPPER (II) ION, HYDROXIDE ION, ...
著者Komori, H, Miyazaki, K, Higuchi, Y.
登録日2012-03-21
公開日2013-03-27
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献New insights into the catalytic active-site structure of multicopper oxidases.
Acta Crystallogr.,Sect.D, 70, 2014
4HAK
DownloadVisualize
BU of 4hak by Molmil
Multicopper Oxidase CueO mutant E506A
分子名称: ACETATE ION, Blue copper oxidase CueO, COPPER (II) ION, ...
著者Komori, H, Kataoka, K, Sakurai, T, Higuchi, Y.
登録日2012-09-26
公開日2013-10-30
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Multicopper Oxidase CueO mutant E506A
TO BE PUBLISHED
4E9Y
DownloadVisualize
BU of 4e9y by Molmil
Multicopper Oxidase mgLAC (data4)
分子名称: CHLORIDE ION, COPPER (II) ION, Multicopper oxidase, ...
著者Komori, H, Miyazaki, K, Higuchi, Y.
登録日2012-03-21
公開日2013-03-27
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献New insights into the catalytic active-site structure of multicopper oxidases.
Acta Crystallogr.,Sect.D, 70, 2014

226707

件を2024-10-30に公開中

PDB statisticsPDBj update infoContact PDBjnumon