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PDB: 214 件
1NSP
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BU of 1nsp by Molmil
MECHANISM OF PHOSPHATE TRANSFER BY NUCLEOSIDE DIPHOSPHATE KINASE: X-RAY STRUCTURES OF A PHOSPHO-HISTIDINE INTERMEDIATE OF THE ENZYMES FROM DROSOPHILA AND DICTYOSTELIUM
分子名称: NUCLEOSIDE DIPHOSPHATE KINASE
著者Janin, J, Morera, S, Chiadmi, M, Lebras, G, Lascu, I.
登録日1995-04-18
公開日1995-07-10
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Mechanism of phosphate transfer by nucleoside diphosphate kinase: X-ray structures of the phosphohistidine intermediate of the enzymes from Drosophila and Dictyostelium.
Biochemistry, 34, 1995
1NCL
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BU of 1ncl by Molmil
THERMAL STABILITY OF HEXAMERIC AND TETRAMERIC NUCLEOSIDE, DIPHOSPHATE KINASES
分子名称: NUCLEOSIDE DIPHOSPHATE KINASE
著者Janin, J, Morera, S, Lascu, I.
登録日1996-03-22
公開日1996-11-08
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Thermal stability of hexameric and tetrameric nucleoside diphosphate kinases. Effect of subunit interaction.
J.Biol.Chem., 271, 1996
1NDL
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THE AWD NUCLEOTIDE DIPHOSPHATE KINASE FROM DROSOPHILA
分子名称: NUCLEOSIDE DIPHOSPHATE KINASE
著者Janin, J, Chiadmi, M, Dumas, C, Lascu, I, Lebras, G, Morera, S, Veron, M.
登録日1993-11-27
公開日1994-04-30
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of the Awd nucleotide diphosphate kinase from Drosophila.
Structure, 1, 1993
1NDC
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BU of 1ndc by Molmil
X-RAY STRUCTURE OF NUCLEOSIDE DIPHOSPHATE KINASE COMPLEXED WITH DTDP AND MG2+ AT 2 A RESOLUTION
分子名称: MAGNESIUM ION, NUCLEOSIDE DIPHOSPHATE KINASE, THYMIDINE-5'-DIPHOSPHATE
著者Cherfils, J, Morera, S, Janin, J.
登録日1994-04-27
公開日1994-06-22
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献X-ray structure of nucleoside diphosphate kinase complexed with thymidine diphosphate and Mg2+ at 2-A resolution.
Biochemistry, 33, 1994
1NDP
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BU of 1ndp by Molmil
ADENOSINE 5'-DIPHOSPHATE BINDING AND THE ACTIVE SITE OF NUCLEOSIDE DIPHOSPHATE KINASE
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, NUCLEOSIDE DIPHOSPHATE KINASE
著者Janin, J, Morera, S, Dumas, C, Lascu, I, Lebras, G, Veron, M.
登録日1993-11-29
公開日1994-04-30
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Adenosine 5'-diphosphate binding and the active site of nucleoside diphosphate kinase.
Biochemistry, 33, 1994
1Y8Z
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BU of 1y8z by Molmil
alpha-glucosyltransferase in complex with UDP and a 13-mer DNA containing a HMU base at 1.9 A resolution
分子名称: 5'-D(*CP*TP*AP*TP*CP*TP*GP*AP*G)-3', 5'-D(*GP*AP*TP*AP*CP*TP*(5HU)P*AP*GP*AP*TP*AP*G)-3', CHLORIDE ION, ...
著者Lariviere, L, Sommer, N, Morera, S.
登録日2004-12-14
公開日2005-08-30
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural evidence of a passive base-flipping mechanism for AGT, an unusual GT-B glycosyltransferase.
J.Mol.Biol., 352, 2005
1YA6
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alpha-glucosyltransferase in complex with UDP and a 13-mer DNA containing a central A:G mismatch
分子名称: 5'-D(*AP*TP*AP*CP*TP*AP*AP*GP*AP*TP*AP*G)-3', 5'-D(*CP*TP*AP*TP*CP*TP*GP*AP*GP*TP*AP*T)-3', COBALT HEXAMMINE(III), ...
著者Lariviere, L, Sommer, N, Morera, S.
登録日2004-12-17
公開日2005-08-30
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural evidence of a passive base-flipping mechanism for AGT, an unusual GT-B glycosyltransferase.
J.Mol.Biol., 352, 2005
1Y6G
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BU of 1y6g by Molmil
alpha-glucosyltransferase in complex with UDP and a 13_mer DNA containing a HMU base at 2.8 A resolution
分子名称: 1,2-ETHANEDIOL, 5'-D(*CP*TP*AP*TP*CP*TP*GP*AP*GP*TP*AP*T)-3', 5'-D(*GP*AP*TP*AP*CP*TP*(5HU)P*AP*GP*AP*TP*AP*G)-3', ...
著者Lariviere, L, Sommer, N, Morera, S.
登録日2004-12-06
公開日2005-08-30
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural evidence of a passive base-flipping mechanism for AGT, an unusual GT-B glycosyltransferase.
J.Mol.Biol., 352, 2005
1XV5
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alpha-glucosyltransferase (AGT) in complex with UDP
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, DNA alpha-glucosyltransferase, ...
著者Lariviere, L, Sommer, N, Morera, S.
登録日2004-10-27
公開日2005-08-30
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Structural evidence of a passive base-flipping mechanism for AGT, an unusual GT-B glycosyltransferase.
J.Mol.Biol., 352, 2005
1Y6F
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alpha-glucosyltransferase in complex with UDP-glucose and DNA containing an abasic site
分子名称: 5'-D(*CP*TP*AP*TP*CP*TP*GP*AP*GP*TP*AP*TP*C)-3', 5'-D(*GP*AP*TP*AP*CP*TP*(3DR)P*AP*GP*AP*TP*AP*G)-3', DI(HYDROXYETHYL)ETHER, ...
著者Lariviere, L, Sommer, N, Morera, S.
登録日2004-12-06
公開日2005-08-30
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural evidence of a passive base-flipping mechanism for AGT, an unusual GT-B glycosyltransferase.
J.Mol.Biol., 352, 2005
6EQ0
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BU of 6eq0 by Molmil
Structure of the periplasmic binding protein (PBP) MelB (atu4661) in complex with galactose from agrobacterium tumefacien C58
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
著者Vigouroux, A, Morera, S.
登録日2017-10-12
公開日2018-04-11
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献The plant defense signal galactinol is specifically used as a nutrient by the bacterial pathogenAgrobacterium fabrum.
J. Biol. Chem., 293, 2018
6EQ1
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Structure of the periplasmic binding protein (PBP) MelB (Atu4661) in complex with stachyose from agrobacterium fabrum C58
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
著者Vigouroux, A, Morera, S.
登録日2017-10-12
公開日2018-04-11
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The plant defense signal galactinol is specifically used as a nutrient by the bacterial pathogenAgrobacterium fabrum.
J. Biol. Chem., 293, 2018
1BIX
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BU of 1bix by Molmil
THE CRYSTAL STRUCTURE OF THE HUMAN DNA REPAIR ENDONUCLEASE HAP1 SUGGESTS THE RECOGNITION OF EXTRA-HELICAL DEOXYRIBOSE AT DNA ABASIC SITES
分子名称: AP ENDONUCLEASE 1, PLATINUM (II) ION, SAMARIUM (III) ION
著者Gorman, M.A, Morera, S, Rothwell, D.G, De La Fortelle, E, Mol, C.D, Tainer, J.A, Hickson, I.D, Freemont, P.S.
登録日1998-06-19
公開日1999-06-22
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The crystal structure of the human DNA repair endonuclease HAP1 suggests the recognition of extra-helical deoxyribose at DNA abasic sites.
EMBO J., 16, 1997
6FT2
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BU of 6ft2 by Molmil
Structure of the periplasmic binding protein LAO-Q122A in complex with arginine.
分子名称: 1,2-ETHANEDIOL, ARGININE, CHLORIDE ION, ...
著者Vigouroux, A, Morera, S.
登録日2018-02-20
公開日2018-03-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Structure of the periplasmic binding protein LAO-Q122A A in complex with arginin
To Be Published
1CDZ
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BU of 1cdz by Molmil
BRCT DOMAIN FROM DNA-REPAIR PROTEIN XRCC1
分子名称: PROTEIN (DNA-REPAIR PROTEIN XRCC1)
著者Zhang, X, Morera, S, Bates, P, Whitehead, P, Coffer, A, Hainbucher, K, Nash, R, Sternberg, M, Lindahl, T, Freemont, P.
登録日1999-03-04
公開日2000-02-28
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structure of an XRCC1 BRCT domain: a new protein-protein interaction module.
EMBO J., 17, 1998
1ANW
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BU of 1anw by Molmil
THE EFFECT OF METAL BINDING ON THE STRUCTURE OF ANNEXIN V AND IMPLICATIONS FOR MEMBRANE BINDING
分子名称: ANNEXIN V, CALCIUM ION
著者Lewit-Bentley, A, Morera, S, Huber, R, Bodo, G.
登録日1993-10-26
公開日1994-12-20
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The effect of metal binding on the structure of annexin V and implications for membrane binding.
Eur.J.Biochem., 210, 1992
6EPZ
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BU of 6epz by Molmil
Structure of the periplasmic binding protein MelB (Atu4661) in complex with melibiose from Agrobacterium fabrum C58
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Vigouroux, A, Morera, S.
登録日2017-10-12
公開日2018-04-11
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The plant defense signal galactinol is specifically used as a nutrient by the bacterial pathogenAgrobacterium fabrum.
J. Biol. Chem., 293, 2018
6EQ8
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BU of 6eq8 by Molmil
Structure of the periplasmic binding protein (PBP) MelB (Atu4661) in complex with galactinol from agrobacterium fabrum C58
分子名称: 1,2-ETHANEDIOL, 1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE, CALCIUM ION, ...
著者Vigouroux, A, Morera, S.
登録日2017-10-12
公開日2018-04-18
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献The plant defense signal galactinol is specifically used as a nutrient by the bacterial pathogenAgrobacterium fabrum.
J. Biol. Chem., 293, 2018
4P0I
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BU of 4p0i by Molmil
Structure of the PBP NocT
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Nopaline-binding periplasmic protein
著者Vigouroux, A, Morera, S.
登録日2014-02-21
公開日2014-10-22
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Agrobacterium uses a unique ligand-binding mode for trapping opines and acquiring a competitive advantage in the niche construction on plant host.
Plos Pathog., 10, 2014
5OVZ
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BU of 5ovz by Molmil
High resolution structure of the PBP NocT in complex with nopaline
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, N-[(1S)-4-carbamimidamido-1-carboxybutyl]-D-glutamic acid, ...
著者Vigouroux, A, Morera, S.
登録日2017-08-30
公開日2018-10-10
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Agrobacterium uses a unique ligand-binding mode for trapping opines and acquiring a competitive advantage in the niche construction on plant host.
Plos Pathog., 10, 2014
6YAO
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BU of 6yao by Molmil
Crystal structure of ZmCKO4a in complex with inhibitor 1-[2-(2-Hydroxy-ethyl)-phenyl]-3-(3-trifluoromethoxy-phenyl)-urea
分子名称: 1,2-ETHANEDIOL, 1-[2-(2-Hydroxy-ethyl)-phenyl]-3-(3-trifluoromethoxy-phenyl)-urea, Cytokinin dehydrogenase 4, ...
著者Kopecny, D, Briozzo, P, Morera, S.
登録日2020-03-12
公開日2020-10-14
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Diphenylurea-derived cytokinin oxidase/dehydrogenase inhibitors for biotechnology and agriculture.
J.Exp.Bot., 72, 2021
6YAQ
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BU of 6yaq by Molmil
Crystal sttructure of ZmCKO8 in complex with inhibitor 1-(3-Chloro-5-trifluoromethoxy-phenyl)-3-[2-(2-hydroxy-ethyl)-phenyl]-urea
分子名称: 1,2-ETHANEDIOL, 1-(3-Chloro-5-trifluoromethoxy-phenyl)-3-[2-(2-hydroxy-ethyl)-phenyl]-urea, Cytokinin dehydrogenase 8, ...
著者Kopecny, D, Briozzo, P, Morera, S.
登録日2020-03-12
公開日2020-10-14
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Diphenylurea-derived cytokinin oxidase/dehydrogenase inhibitors for biotechnology and agriculture.
J.Exp.Bot., 72, 2021
4RA1
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BU of 4ra1 by Molmil
PBP AccA from A. tumefaciens C58 in complex with D-Glucose-2-phosphate
分子名称: 1,2-ETHANEDIOL, 2-O-phosphono-alpha-D-glucopyranose, 2-O-phosphono-beta-D-glucopyranose, ...
著者El Sahili, A, Morera, S.
登録日2014-09-09
公開日2015-08-19
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献A Pyranose-2-Phosphate Motif Is Responsible for Both Antibiotic Import and Quorum-Sensing Regulation in Agrobacterium tumefaciens.
Plos Pathog., 11, 2015
6YAP
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BU of 6yap by Molmil
Crystal structure of ZmCKO4a in complex with inhibitor 1-(3-Chloro-5-trifluoromethoxy-phenyl)-3-[2-(2-hydroxy-ethyl)-phenyl]-urea
分子名称: 1,2-ETHANEDIOL, 1-(3-Chloro-5-trifluoromethoxy-phenyl)-3-[2-(2-hydroxy-ethyl)-phenyl]-urea, Cytokinin dehydrogenase 4, ...
著者Kopecny, D, Briozzo, P, Morera, S.
登録日2020-03-12
公開日2020-10-14
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Diphenylurea-derived cytokinin oxidase/dehydrogenase inhibitors for biotechnology and agriculture.
J.Exp.Bot., 72, 2021
3IWJ
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BU of 3iwj by Molmil
Crystal structure of aminoaldehyde dehydrogenase 2 from Pisum sativum (PsAMADH2)
分子名称: GLYCEROL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Putative aminoaldehyde dehydrogenase, ...
著者Kopecny, D, Morera, S, Briozzo, P.
登録日2009-09-02
公開日2010-01-19
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structural and functional characterization of plant aminoaldehyde dehydrogenase from Pisum sativum with a broad specificity for natural and synthetic aminoaldehydes.
J.Mol.Biol., 396, 2010

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