Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 30 results

6H8O
DownloadVisualize
BU of 6h8o by Molmil
Crystal structure of the Master-Rep protein nuclease domain from the Faba Bean Necrotic Yellows Virus
Descriptor: Replication-associated protein, SULFATE ION
Authors:Moncalian, G, Gonzalez-Montes, L.
Deposit date:2018-08-02
Release date:2018-08-22
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Crystal structure of the Master-Rep protein nuclease domain from the Faba Bean Necrotic Yellows Virus
To Be Published
4PCB
DownloadVisualize
BU of 4pcb by Molmil
Conjugative Relaxase TrwC in complex with mutant OriT Dna
Descriptor: DNA 5'-D(P*GP*CP*AP*CP*CP*GP*AP*AP*GP*GP*TP*GP*CP*GP*TP*AP*TP*TP*CP*TP*TP*GP - 3'), PHOSPHATE ION, TrwC
Authors:Moncalian, G, Carballeira, J.D, de la Cruz, F, Gonzalez-Perez, B.
Deposit date:2014-04-14
Release date:2014-09-17
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A high security double lock and key mechanism in HUH relaxases controls oriT-processing for plasmid conjugation.
Nucleic Acids Res., 42, 2014
1US8
DownloadVisualize
BU of 1us8 by Molmil
The Rad50 signature motif: essential to ATP binding and biological function
Descriptor: DNA DOUBLE-STRAND BREAK REPAIR RAD50 ATPASE
Authors:Moncalian, G, Lengsfeld, B, Bhaskara, V, Hopfner, K.P, Karcher, A, Alden, E, Tainer, J.A, Paull, T.T.
Deposit date:2003-11-20
Release date:2003-11-25
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The Rad50 Signature Motif: Essential to ATP Binding and Biological Function
J.Mol.Biol., 335, 2004
2J6K
DownloadVisualize
BU of 2j6k by Molmil
N-TERMINAL SH3 DOMAIN OF CMS (CD2AP HUMAN HOMOLOG)
Descriptor: CD2-ASSOCIATED PROTEIN, SODIUM ION
Authors:Moncalian, G, Cardenes, N, Deribe, Y.L, Spinola-Amilibia, M, Dikic, I, Bravo, J.
Deposit date:2006-09-29
Release date:2006-10-11
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.77 Å)
Cite:Atypical Polyproline Recognition by the Cms N- Terminal SH3 Domain.
J.Biol.Chem., 281, 2006
2J7I
DownloadVisualize
BU of 2j7i by Molmil
ATYPICAL POLYPROLINE RECOGNITION BY THE CMS N-TERMINAL SH3 DOMAIN. CMS:CD2 HETERODIMER
Descriptor: CD2-ASSOCIATED PROTEIN, T-CELL SURFACE ANTIGEN CD2
Authors:Moncalian, G, Cardenes, N, Deribe, Y.L, Spinola-Amilibia, M, Dikic, I, Bravo, J.
Deposit date:2006-10-09
Release date:2006-11-06
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Atypical Polyproline Recognition by the Cms N-Terminal Src Homology 3 Domain.
J.Biol.Chem., 281, 2006
2J6O
DownloadVisualize
BU of 2j6o by Molmil
ATYPICAL POLYPROLINE RECOGNITION BY THE CMS N-TERMINAL SH3 DOMAIN. CMS:CD2 HETEROTRIMER
Descriptor: CD2-ASSOCIATED PROTEIN, T-CELL SURFACE ANTIGEN CD2
Authors:Moncalian, G, Cardenes, N, Deribe, Y.L, Spinola-Amilibia, M, Dikic, I, Bravo, J.
Deposit date:2006-10-02
Release date:2006-10-11
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Atypical Polyproline Recognition by the Cms N-Terminal SH3 Domain.
J.Biol.Chem., 281, 2006
2J6F
DownloadVisualize
BU of 2j6f by Molmil
N-TERMINAL SH3 DOMAIN OF CMS (CD2AP HUMAN HOMOLOG) BOUND TO CBL-B PEPTIDE
Descriptor: CD2-ASSOCIATED PROTEIN, E3 UBIQUITIN-PROTEIN LIGASE CBL-B
Authors:Moncalian, G, Cardenes, N, Deribe, Y.L, Spinola-Amilibia, M, Dikic, I, Bravo, J.
Deposit date:2006-09-28
Release date:2006-10-11
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Atypical Polyproline Recognition by the Cms N- Terminal SH3 Domain.
J.Biol.Chem., 281, 2006
1QX0
DownloadVisualize
BU of 1qx0 by Molmil
CONJUGATIVE RELAXASE TRWC IN COMPLEX WITH ORIT DNA. METAL-BOUND STRUCTURE
Descriptor: DNA OLIGONUCLEOTIDE, SULFATE ION, ZINC ION, ...
Authors:Guasch, A, Lucas, M, Moncalian, G, Cabezas, M, Prez-Luque, R, Gomis-Rth, F.X, de la Cruz, F, Coll, M.
Deposit date:2003-09-04
Release date:2003-11-25
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:RECOGNITION AND PROCESSING OF THE ORIGIN OF TRANSFER DNA BY CONJUGATIVE RELAXASE TRWC
Nat.Struct.Biol., 10, 2003
2AK5
DownloadVisualize
BU of 2ak5 by Molmil
beta PIX-SH3 complexed with a Cbl-b peptide
Descriptor: 8-residue peptide from a signal transduction protein CBL-B, Rho guanine nucleotide exchange factor 7
Authors:Jozic, D, Cardenes, N, Deribe, Y.L, Moncalian, G, Hoeller, D, Groemping, Y, Dikic, I, Rittinger, K, Bravo, J.
Deposit date:2005-08-03
Release date:2005-10-11
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Cbl promotes clustering of endocytic adaptor proteins.
Nat.Struct.Mol.Biol., 12, 2005
7PC1
DownloadVisualize
BU of 7pc1 by Molmil
DNA binding domain of partition protein StbA of plasmid R388
Descriptor: StbA
Authors:Guynet, C, Moncalian, G.
Deposit date:2021-08-03
Release date:2022-08-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Characterization of the DNA Binding Domain of StbA, A Key Protein of A New Type of DNA Segregation System.
J.Mol.Biol., 434, 2022
7BCB
DownloadVisualize
BU of 7bcb by Molmil
Crystal structure of the HTH DNA binding protein ArdK from R388 plasmid bound to IR3 DNA
Descriptor: DNA (5'-D(*TP*AP*AP*TP*GP*TP*CP*AP*AP*AP*TP*AP*TP*TP*GP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*CP*AP*AP*TP*AP*TP*TP*TP*GP*AP*CP*AP*TP*TP*A)-3'), KORA domain-containing protein
Authors:Fernandez-Lopez, R, Boer, D.R, Moncalian, G.
Deposit date:2020-12-19
Release date:2022-01-12
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis of direct and inverted DNA sequence repeat recognition by helix-turn-helix transcription factors.
Nucleic Acids Res., 50, 2022
7BCA
DownloadVisualize
BU of 7bca by Molmil
Crystal structure of the HTH DNA binding protein ArdK from R388 plasmid bound to a direct-repeat DNA element
Descriptor: DNA (5'-D(*GP*TP*AP*TP*TP*GP*AP*CP*AP*CP*CP*TP*AP*TP*TP*GP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*CP*AP*AP*TP*AP*GP*GP*TP*GP*TP*CP*AP*AP*TP*AP*C)-3'), KORA domain-containing protein
Authors:Fernandez-Lopez, R, Boer, D.R, Moncalian, G.
Deposit date:2020-12-18
Release date:2022-07-13
Last modified:2022-12-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis of direct and inverted DNA sequence repeat recognition by helix-turn-helix transcription factors.
Nucleic Acids Res., 50, 2022
6I89
DownloadVisualize
BU of 6i89 by Molmil
Crystal structure of Antirestriction ArdC protein from R388 plasmid. Metal-free structure.
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ArdC protein
Authors:Gonzalez-Montes, L, Moncalian, G.
Deposit date:2018-11-19
Release date:2020-03-18
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:ArdC, a ssDNA-binding protein with a metalloprotease domain, overpasses the recipient hsdRMS restriction system broadening conjugation host range.
Plos Genet., 16, 2020
7BBQ
DownloadVisualize
BU of 7bbq by Molmil
Crystal structure of the HTH DNA binding protein ArdK from R388 plasmid. Apo form.
Descriptor: KORA domain-containing protein
Authors:Fernandez-Lopez, R, Boer, D.R, Moncalian, G.
Deposit date:2020-12-18
Release date:2022-07-13
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural basis of direct and inverted DNA sequence repeat recognition by helix-turn-helix transcription factors.
Nucleic Acids Res., 50, 2022
2BZ8
DownloadVisualize
BU of 2bz8 by Molmil
N-terminal Sh3 domain of CIN85 bound to Cbl-b peptide
Descriptor: SH3-DOMAIN KINASE BINDING PROTEIN 1, SIGNAL TRANSDUCTION PROTEIN CBL-B SH3-BINDING PROTEIN CBL-B, RING FINGER PROTEIN 56, ...
Authors:Cardenes, N, Moncalian, G, Bravo, J.
Deposit date:2005-08-12
Release date:2005-10-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Cbl Promotes Clustering of Endocytic Adaptor Proteins
Nat.Struct.Mol.Biol., 12, 2005
6SNA
DownloadVisualize
BU of 6sna by Molmil
Crystal structure of Antirestriction ArdC protein from R388 plasmid. Mn(II)-bound structure.
Descriptor: ArdC protein, MANGANESE (II) ION
Authors:Gonzalez-Montes, L, Moncalian, G.
Deposit date:2019-08-23
Release date:2020-04-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:ArdC, a ssDNA-binding protein with a metalloprotease domain, overpasses the recipient hsdRMS restriction system broadening conjugation host range.
Plos Genet., 16, 2020
3DSC
DownloadVisualize
BU of 3dsc by Molmil
Crystal structure of P. furiosus Mre11 DNA synaptic complex
Descriptor: DNA (5'-D(P*DCP*DAP*DCP*DAP*DAP*DGP*DCP*DTP*DTP*DTP*DTP*DGP*DCP*DTP*DTP*DGP*DTP*DGP*DAP*DC)-3'), DNA double-strand break repair protein mre11
Authors:Williams, R.S, Moncalian, G, Shin, D.S, Tainer, J.A.
Deposit date:2008-07-11
Release date:2008-10-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Mre11 dimers coordinate DNA end bridging and nuclease processing in double-strand-break repair.
Cell(Cambridge,Mass.), 135, 2008
1OMH
DownloadVisualize
BU of 1omh by Molmil
Conjugative Relaxase TrwC in complex with OriT Dna. Metal-free structure.
Descriptor: DNA OLIGONUCLEOTIDE, SULFATE ION, trwC protein
Authors:Guasch, A, Lucas, M, Moncalian, G, Cabezas, M, Perez-Luque, R, Gomis-Ruth, F.X, de la Cruz, F, Coll, M.
Deposit date:2003-02-25
Release date:2003-11-25
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Recognition and processing of the origin of transfer DNA by conjugative relaxase TrwC.
Nat.Struct.Biol., 10, 2003
6RIW
DownloadVisualize
BU of 6riw by Molmil
PfaC Keto synthase-Chain length factor
Descriptor: MAGNESIUM ION, ORF10
Authors:Santin, O, Moncalian, G.
Deposit date:2019-04-25
Release date:2020-08-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure and Mechanism of the Ketosynthase-Chain Length Factor Didomain from a Prototypical Polyunsaturated Fatty Acid Synthase.
Biochemistry, 59, 2020
1OSB
DownloadVisualize
BU of 1osb by Molmil
Conjugative Relaxase TrwC in complex with OriT Dna. Metal-free structure.
Descriptor: Dna oligonucleotide, SULFATE ION, TrwC protein
Authors:Guasch, A, Lucas, M, Moncalian, G, Cabezas, M, Perez-Luque, R, Gomis-Ruth, F.X, de la Cruz, F, Coll, M.
Deposit date:2003-03-19
Release date:2003-11-25
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Recognition and processing of the origin of transfer DNA by conjugative relaxase TrwC.
Nat.Struct.Biol., 10, 2003
1GL6
DownloadVisualize
BU of 1gl6 by Molmil
Plasmid coupling protein TrwB in complex with the non-hydrolysable GTP analogue GDPNP
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ATPASE, CHLORIDE ION, ...
Authors:Gomis-Ruth, F.X, Moncalian, G, De La cruz, F, Coll, M.
Deposit date:2001-08-28
Release date:2002-05-16
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The Bacterial Conjugation Protein Trwb Resembles Ring Helicases and F1-ATPase
Nature, 409, 2001
1GL7
DownloadVisualize
BU of 1gl7 by Molmil
Plasmid coupling protein TrwB in complex with the non-hydrolisable ATP-analogue ADPNP.
Descriptor: CHLORIDE ION, CONJUGAL TRANSFER PROTEIN TRWB, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Gomis-Ruth, F.X, Moncalian, G, De La cruz, F, Coll, M.
Deposit date:2001-08-28
Release date:2002-05-16
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:The Bacterial Conjugation Protein Trwb Resembles Ring Helicases and F1-ATPase
Nature, 409, 2001
1GKI
DownloadVisualize
BU of 1gki by Molmil
Plasmid coupling protein TrwB in complex with ADP and Mg2+.
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ADENOSINE-5'-DIPHOSPHATE, CONJUGAL TRANSFER PROTEIN TRWB, ...
Authors:Gomis-Ruth, F.X, Moncalian, G, De La cruz, F, Coll, M.
Deposit date:2001-08-14
Release date:2002-05-16
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:The Bacterial Conjugation Protein Trwb Resembles Ring Helicases and F1-ATPase
Nature, 409, 2001
3QKU
DownloadVisualize
BU of 3qku by Molmil
Mre11 Rad50 binding domain in complex with Rad50 and AMP-PNP
Descriptor: DNA double-strand break repair protein mre11, DNA double-strand break repair rad50 ATPase, MAGNESIUM ION, ...
Authors:Williams, G.J, Williams, R.S, Arvai, A, Moncalian, G, Tainer, J.A.
Deposit date:2011-02-01
Release date:2011-03-30
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:ABC ATPase signature helices in Rad50 link nucleotide state to Mre11 interface for DNA repair.
Nat.Struct.Mol.Biol., 18, 2011
3QKT
DownloadVisualize
BU of 3qkt by Molmil
Rad50 ABC-ATPase with adjacent coiled-coil region in complex with AMP-PNP
Descriptor: DNA double-strand break repair rad50 ATPase, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Williams, G.J, Williams, R.S, Arvai, A, Moncalian, G, Tainer, J.A.
Deposit date:2011-02-01
Release date:2011-03-30
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:ABC ATPase signature helices in Rad50 link nucleotide state to Mre11 interface for DNA repair.
Nat.Struct.Mol.Biol., 18, 2011

 

12>

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon