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PDB: 13 件

3DMW
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Crystal structure of human type III collagen G982-G1023 containing C-terminal cystine knot
分子名称: Collagen alpha-1(III) chain
著者Boudko, S.P, Engel, J, Okuyama, K, Mizuno, K, Bachinger, H.P, Schumacher, M.A.
登録日2008-07-01
公開日2008-09-30
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of human type III collagen Gly991-Gly1032 cystine knot-containing peptide shows both 7/2 and 10/3 triple helical symmetries.
J.Biol.Chem., 283, 2008
2G66
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Crystal structure of a collagen-like peptide with 3(S)Hyp in the Xaa position
分子名称: collagen
著者Schumacher, M.A, Mizuno, K, Bachinger, H.P.
登録日2006-02-24
公開日2006-08-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The Crystal Structure of a Collagen-like Polypeptide with 3(S)-Hydroxyproline Residues in the Xaa Position Forms a Standard 7/2 Collagen Triple Helix
J.Biol.Chem., 281, 2006
5YPX
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BU of 5ypx by Molmil
Crystal structure of calaxin with magnesium
分子名称: Calaxin, MAGNESIUM ION
著者Shojima, T, Hou, F, Takahashi, Y, Okai, M, Mizuno, K, Inaba, K, Miyakawa, T, Tanokura, M.
登録日2017-11-04
公開日2018-03-14
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.64 Å)
主引用文献Crystal structure of a Ca2+-dependent regulator of flagellar motility reveals the open-closed structural transition
Sci Rep, 8, 2018
5X9A
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Crystal structure of calaxin with calcium
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, Calaxin
著者Shojima, T, Hou, F, Takahashi, Y, Okai, M, Mizuno, K, Inaba, K, Miyakawa, T, Tanokura, M.
登録日2017-03-06
公開日2018-03-14
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal structure of a Ca2+-dependent regulator of flagellar motility reveals the open-closed structural transition
Sci Rep, 8, 2018
2D3H
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Crystal structures of collagen model peptides (Pro-Pro-Gly)4-Hyp-Hyp-Gly-(Pro-Pro-Gly)4
分子名称: COLLAGEN MODEL PEPTIDES (PRO-PRO-GLY)4-HYP-HYP-GLY-(PRO-PRO-GLY)4
著者Wu, G, Noguchi, K, Okuyama, K, Mizuno, K, Bachinger, H.P.
登録日2005-09-28
公開日2006-09-19
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.22 Å)
主引用文献High-resolution structures of collagen-like peptides [(Pro-Pro-Gly)(4)-Xaa-Yaa-Gly-(Pro-Pro-Gly)(4)]: Implications for triple-helix hydration and Hyp(X) puckering.
Biopolymers, 91, 2009
3A0M
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Structure of (PPG)4-OVG-(PPG)4, monoclinic, twinned crystal
分子名称: collagen-like peptide
著者Okuyama, K, Morimoto, T, Mizuno, K, Bachinger, H.P.
登録日2009-03-21
公開日2010-03-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.02 Å)
主引用文献Stabilization of triple-helical structures of collagen peptides containing a Hyp-Thr-Gly, Hyp-Val-Gly, or Hyp-Ser-Gly sequence.
Biopolymers, 95, 2011
3A1H
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Crystal Structure Analysis of the Collagen-like Peptide, (PPG)4-OTG-(PPG)4
分子名称: collagen-like peptide
著者Okuyama, K, Miyama, K, Mizuno, K, Bachinger, H.P.
登録日2009-04-03
公開日2010-03-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.08 Å)
主引用文献Stabilization of triple-helical structures of collagen peptides containing a Hyp-Thr-Gly, Hyp-Val-Gly, or Hyp-Ser-Gly sequence.
Biopolymers, 95, 2011
3A08
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Structure of (PPG)4-OOG-(PPG)4, monoclinic, twinned crystal
分子名称: collagen-like peptide
著者Okuyama, K, Morimoto, T, Wu, G, Noguchi, K, Mizuno, K, Bachinger, H.P.
登録日2009-03-06
公開日2010-01-12
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.22 Å)
主引用文献Two crystal modifications of (Pro-Pro-Gly)4-Hyp-Hyp-Gly-(Pro-Pro-Gly)4 reveal the puckering preference of Hyp(X) in the Hyp(X):Hyp(Y) and Hyp(X):Pro(Y) stacking pairs in collagen helices.
Acta Crystallogr.,Sect.D, 66, 2010
3ADM
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Crystal structure of (Pro-Pro-Gly)4-Hyp-Ser-Gly-(Pro-Pro-Gly)4
分子名称: collagen-like peptide
著者Okuyama, K, Miyama, K, Masakiyo, K, Mizuno, K, Bachinger, H.P.
登録日2010-01-22
公開日2011-01-19
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.18 Å)
主引用文献Stabilization of triple-helical structures of collagen peptides containing a Hyp-Thr-Gly, Hyp-Val-Gly, or Hyp-Ser-Gly sequence.
Biopolymers, 95, 2011
3A19
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Structure of (PPG)4-OOG-(PPG)4_H monoclinic, twinned crystal
分子名称: collagen-like peptide
著者Okuyama, K, Morimoto, T, Hyakutake, M, Wu, G, Mizuno, K, Bachinger, H.P.
登録日2009-03-28
公開日2010-01-12
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Two crystal modifications of (Pro-Pro-Gly)4-Hyp-Hyp-Gly-(Pro-Pro-Gly)4 reveal the puckering preference of Hyp(X) in the Hyp(X):Hyp(Y) and Hyp(X):Pro(Y) stacking pairs in collagen helices.
Acta Crystallogr.,Sect.D, 66, 2010
3B0S
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Crystal Structure of (Gly-Pro-Hyp)9
分子名称: collagen-like peptide
著者Okuyama, K, Miyama, K, Mizuno, K, Bachinger, H.P.
登録日2011-06-14
公開日2012-05-30
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Crystal structure of (Gly-Pro-Hyp)(9) : Implications for the collagen molecular model.
Biopolymers, 97, 2012
3ABN
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Crystal structure of (Pro-Pro-Gly)4-Hyp-Asp-Gly-(Pro-Pro-Gly)4 at 1.02 A
分子名称: collagen-like peptide
著者Okuyama, K, Shimura, M, Kawaguchi, T, Noguchi, K, Mizuno, K, Bachinger, H.P.
登録日2009-12-16
公開日2010-12-01
最終更新日2013-11-27
実験手法X-RAY DIFFRACTION (1.02 Å)
主引用文献Crystal structure of the collagen model peptide (Pro-Pro-Gly)4 -Hyp-Asp-Gly-(Pro-Pro-Gly)4 at 1.0 angstrom resolution.
Biopolymers, 99, 2013
1YM8
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crystal structure of GZZ shows up puckering of the proline ring in the Xaa position.
分子名称: collagen gly-4(R)hyp-4(R)hyp
著者Schumacher, M.A, Mizuno, K, Bachinger, H.P.
登録日2005-01-20
公開日2005-04-19
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献The crystal structure of the collagen-like polypeptide (glycyl-4(R)-hydroxyprolyl-4(R)-hydroxyprolyl)9 at 1.55 A resolution shows up-puckering of the proline ring in the Xaa position.
J.Biol.Chem., 280, 2005

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