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PDB: 69 件
1AMS
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X-RAY CRYSTALLOGRAPHIC STUDY OF PYRIDOXAMINE 5'-PHOSPHATE-TYPE ASPARTATE AMINOTRANSFERASES FROM ESCHERICHIA COLI IN THREE FORMS
分子名称: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, ASPARTATE AMINOTRANSFERASE, GLUTARIC ACID
著者Miyahara, I, Hirotsu, K, Hayashi, H, Kagamiyama, H.
登録日1994-07-01
公開日1994-09-30
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献X-ray crystallographic study of pyridoxamine 5'-phosphate-type aspartate aminotransferases from Escherichia coli in three forms.
J.Biochem.(Tokyo), 116, 1994
1AMR
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BU of 1amr by Molmil
X-RAY CRYSTALLOGRAPHIC STUDY OF PYRIDOXAMINE 5'-PHOSPHATE-TYPE ASPARTATE AMINOTRANSFERASES FROM ESCHERICHIA COLI IN THREE FORMS
分子名称: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, ASPARTATE AMINOTRANSFERASE, MALEIC ACID
著者Miyahara, I, Hirotsu, K, Hayashi, H, Kagamiyama, H.
登録日1994-07-01
公開日1994-09-30
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献X-ray crystallographic study of pyridoxamine 5'-phosphate-type aspartate aminotransferases from Escherichia coli in three forms.
J.Biochem.(Tokyo), 116, 1994
1AMQ
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BU of 1amq by Molmil
X-RAY CRYSTALLOGRAPHIC STUDY OF PYRIDOXAMINE 5'-PHOSPHATE-TYPE ASPARTATE AMINOTRANSFERASES FROM ESCHERICHIA COLI IN THREE FORMS
分子名称: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, ASPARTATE AMINOTRANSFERASE
著者Miyahara, I, Hirotsu, K, Hayashi, H, Kagamiyama, H.
登録日1994-07-01
公開日1994-09-30
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献X-ray crystallographic study of pyridoxamine 5'-phosphate-type aspartate aminotransferases from Escherichia coli in three forms.
J.Biochem.(Tokyo), 116, 1994
2YRR
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hypothetical alanine aminotransferase (TTH0173) from Thermus thermophilus HB8
分子名称: Aminotransferase, class V, PYRIDOXAL-5'-PHOSPHATE
著者Miyahara, I, Matsumura, M, Goto, M, Omi, R, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-02
公開日2008-04-15
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献hypothetical alanine aminotransferase (TTH0173) from Thermus thermophilus HB8
To be Published
2YRI
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Crystal structure of alanine-pyruvate aminotransferase with 2-methylserine
分子名称: (S,E)-3-HYDROXY-2-((3-HYDROXY-2-METHYL-5-(PHOSPHONOOXYMETHYL)PYRIDIN-4-YL)METHYLENEAMINO)-2-METHYLPROPANOIC ACID, 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, Aminotransferase, ...
著者Miyahara, I, Matsumura, M, Goto, M, Omi, R, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-02
公開日2008-04-15
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献hypothetical alanine aminotransferase (TTHA0173) from Thermus thermophilus HB8
To be Published
1ET0
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BU of 1et0 by Molmil
CRYSTAL STRUCTURE OF AMINODEOXYCHORISMATE LYASE FROM ESCHERICHIA COLI
分子名称: 4-AMINO-4-DEOXYCHORISMATE LYASE, PYRIDOXAL-5'-PHOSPHATE
著者Nakai, T, Mizutani, H, Miyahara, I, Hirotsu, K, Takeda, S, Jhee, K.H, Yoshimura, T, Esaki, N.
登録日2000-04-12
公開日2000-07-19
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Three-dimensional structure of 4-amino-4-deoxychorismate lyase from Escherichia coli.
J.Biochem.(Tokyo), 128, 2000
8IYP
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Crystal structure of serine palmitoyltransferase soaked in 190 mM D-serine solution
分子名称: 1,2-ETHANEDIOL, Serine palmitoyltransferase, [3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL]-SERINE
著者Takahashi, A, Murakami, T, Katayama, A, Miyahara, I, Kamiya, N, Ikushiro, H, Yano, T.
登録日2023-04-05
公開日2024-04-10
実験手法X-RAY DIFFRACTION (1.651 Å)
主引用文献Crystal structure of Serine Palmitoyltransferase from Sphingobacterium multivorum
To Be Published
5BJ3
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BU of 5bj3 by Molmil
THERMUS THERMOPHILUS ASPARTATE AMINOTRANSFERASE TETRA MUTANT 1
分子名称: PROTEIN (ASPARTATE AMINOTRANSFERASE), PYRIDOXAL-5'-PHOSPHATE
著者Ura, H, Nakai, T, Kawaguchi, S.I, Miyahara, I, Hirotsu, K, Kuramitsu, S.
登録日1999-01-11
公開日2003-09-02
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Substrate recognition mechanism of thermophilic dual-substrate enzyme
J.BIOCHEM.(TOKYO), 130, 2001
5BJ4
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THERMUS THERMOPHILUS ASPARTATE AMINOTRANSFERASE TETRA MUTANT 2
分子名称: PHOSPHATE ION, PROTEIN (ASPARTATE AMINOTRANSFERASE), PYRIDOXAL-5'-PHOSPHATE
著者Ura, H, Nakai, T, Kawaguchi, S.I, Miyahara, I, Hirotsu, K, Kuramitsu, S.
登録日1999-01-11
公開日2003-09-02
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Substrate recognition mechanism of thermophilic dual-substrate enzyme
J.BIOCHEM.(TOKYO), 130, 2001
8IYT
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Crystal Structure of Serine Palmitoyltransferase complexed with D-methylserine
分子名称: (2~{R})-2-methyl-2-[[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylamino]-3-oxidanyl-propanoic acid, 1,2-ETHANEDIOL, Serine palmitoyltransferase
著者Takahashi, A, Murakami, T, Katayama, A, Miyahara, I, Kamiya, N, Ikushiro, H, Yano, T.
登録日2023-04-06
公開日2024-04-10
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of Serine Palmitoyltransferase from Sphingobacterium multivorum
To Be Published
8GUH
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BU of 8guh by Molmil
Serine Palmitoyltransferase from Sphingobacterium multivorum complexed with Tris
分子名称: 1,2-ETHANEDIOL, Serine palmitoyltransferase, [4-[[[2-(hydroxymethyl)-1,3-bis(oxidanyl)propan-2-yl]amino]methyl]-6-methyl-5-oxidanyl-pyridin-3-yl]methyl dihydrogen phosphate
著者Murakami, T, Takahashi, A, Katayama, A, Miyahara, I, Kamiya, N, Ikushiro, H, Yano, T.
登録日2022-09-12
公開日2023-07-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structure of Sphingobacterium multivorum serine palmitoyltransferase complexed with tris(hydroxymethyl)aminomethane.
Acta Crystallogr.,Sect.F, 78, 2022
8H20
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Serine Palmitoyltransferase from Sphingobacterium multivorum complexed with Glycine
分子名称: 1,2-ETHANEDIOL, N-GLYCINE-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YL-METHANE], Serine palmitoyltransferase
著者Murakami, T, Takahashi, A, Katayama, A, Miyahara, I, Kamiya, N, Ikushiro, H, Yano, T.
登録日2022-10-04
公開日2023-08-16
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Structural insights into the substrate recognition of serine palmitoyltransferase from Sphingobacterium multivorum.
J.Biol.Chem., 299, 2023
8H21
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Serine Palmitoyltransferase from Sphingobacterium multivorum complexed with L-alanine
分子名称: 1,2-ETHANEDIOL, 2-[(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL)-AMINO]-PROPIONIC ACID, Serine palmitoyltransferase
著者Murakami, T, Takahashi, A, Katayama, A, Miyahara, I, Kamiya, N, Ikushiro, H, Yano, T.
登録日2022-10-04
公開日2023-08-16
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Structural insights into the substrate recognition of serine palmitoyltransferase from Sphingobacterium multivorum.
J.Biol.Chem., 299, 2023
8H1W
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Serine Palmitoyltransferase from Sphingobacterium multivorum
分子名称: 1,2-ETHANEDIOL, Serine palmitoyltransferase
著者Takahashi, A, Murakami, T, Katayama, A, Miyahara, I, Kamiya, N, Ikushiro, H, Yano, T.
登録日2022-10-04
公開日2023-08-16
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural insights into the substrate recognition of serine palmitoyltransferase from Sphingobacterium multivorum.
J.Biol.Chem., 299, 2023
8H1Q
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Serine Palmitoyltransferase from Sphingobacterium multivorum complexed with L-serine
分子名称: 1,2-ETHANEDIOL, Serine palmitoyltransferase, [3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL]-SERINE
著者Murakami, T, Takahashi, A, Katayama, A, Miyahara, I, Kamiya, N, Ikushiro, H, Yano, T.
登録日2022-10-03
公開日2023-08-16
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural insights into the substrate recognition of serine palmitoyltransferase from Sphingobacterium multivorum.
J.Biol.Chem., 299, 2023
8H29
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Serine Palmitoyltransferase from Sphingobacterium multivorum complexed with L-threonine
分子名称: 1,2-ETHANEDIOL, N-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)-L-threonine, Serine palmitoyltransferase
著者Murakami, T, Takahashi, A, Katayama, A, Miyahara, I, Kamiya, N, Ikushiro, H, Yano, T.
登録日2022-10-05
公開日2023-08-16
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Structural insights into the substrate recognition of serine palmitoyltransferase from Sphingobacterium multivorum.
J.Biol.Chem., 299, 2023
8H1Y
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Serine Palmitoyltransferase from Sphingobacterium multivorum complexed with L-homoserine
分子名称: (2~{S})-2-[[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylamino]-4-oxidanyl-butanoic acid, 1,2-ETHANEDIOL, Serine palmitoyltransferase
著者Murakami, T, Takahashi, A, Katayama, A, Miyahara, I, Kamiya, N, Ikushiro, H, Yano, T.
登録日2022-10-04
公開日2023-08-16
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structural insights into the substrate recognition of serine palmitoyltransferase from Sphingobacterium multivorum.
J.Biol.Chem., 299, 2023
5XDF
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BU of 5xdf by Molmil
Homoserine dehydrogenase from Thermus thermophilus HB8 complexed with HSE
分子名称: FORMIC ACID, Homoserine dehydrogenase, L-HOMOSERINE, ...
著者Akai, S, Miyahara, I.
登録日2017-03-28
公開日2017-04-26
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystallographic study of homoserine dehydrogenase from Thermus thermophilus HB8
To Be Published
6A0R
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Homoserine dehydrogenase from Thermus thermophilus HB8 unliganded form
分子名称: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, FORMIC ACID, GLYCEROL, ...
著者Akai, S, Ikushiro, H, Sawai, T, Yano, T, Kamiya, N, Miyahara, I.
登録日2018-06-06
公開日2018-11-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献The crystal structure of homoserine dehydrogenase complexed with l-homoserine and NADPH in a closed form
J. Biochem., 165, 2019
6A0S
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Homoserine dehydrogenase from Thermus thermophilus HB8 complexed with HSE and NADPH
分子名称: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, FORMIC ACID, GLYCEROL, ...
著者Akai, S, Ikushiro, H, Sawai, T, Yano, T, Kamiya, N, Miyahara, I.
登録日2018-06-06
公開日2018-11-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The crystal structure of homoserine dehydrogenase complexed with l-homoserine and NADPH in a closed form
J. Biochem., 165, 2019
6A0U
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BU of 6a0u by Molmil
Homoserine dehydrogenase K195A mutant from Thermus thermophilus HB8 complexed with HSE and NADP+
分子名称: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, FORMIC ACID, GLYCEROL, ...
著者Akai, S, Ikushiro, H, Sawai, T, Yano, T, Kamiya, N, Miyahara, I.
登録日2018-06-06
公開日2018-11-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献The crystal structure of homoserine dehydrogenase complexed with l-homoserine and NADPH in a closed form
J. Biochem., 165, 2019
6A0T
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BU of 6a0t by Molmil
Homoserine dehydrogenase K99A mutant from Thermus thermophilus HB8 complexed with HSE and NADP+
分子名称: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, FORMIC ACID, GLYCEROL, ...
著者Akai, S, Ikushiro, H, Sawai, T, Yano, T, Kamiya, N, Miyahara, I.
登録日2018-06-06
公開日2018-11-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献The crystal structure of homoserine dehydrogenase complexed with l-homoserine and NADPH in a closed form
J. Biochem., 165, 2019
1AN9
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D-AMINO ACID OXIDASE COMPLEX WITH O-AMINOBENZOATE
分子名称: 2-AMINOBENZOIC ACID, D-AMINO ACID OXIDASE, FLAVIN-ADENINE DINUCLEOTIDE
著者Miura, R, Setoyama, C, Nishina, Y, Shiga, K, Mizutani, H, Miyahara, I, Hirotsu, K.
登録日1997-06-28
公開日1997-11-12
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural and mechanistic studies on D-amino acid oxidase x substrate complex: implications of the crystal structure of enzyme x substrate analog complex.
J.Biochem.(Tokyo), 122, 1997
1B5O
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BU of 1b5o by Molmil
THERMUS THERMOPHILUS ASPARTATE AMINOTRANSFERASE SINGLE MUTANT 1
分子名称: PHOSPHATE ION, PROTEIN (ASPARTATE AMINOTRANSFERASE), PYRIDOXAL-5'-PHOSPHATE
著者Ura, H, Nakai, T, Kawaguchi, S.I, Miyahara, I, Hirotsu, K, Kuramitsu, S.
登録日1999-01-07
公開日2003-09-02
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Substrate recognition mechanism of thermophilic dual-substrate enzyme
J.BIOCHEM.(TOKYO), 130, 2001
1B5P
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BU of 1b5p by Molmil
THERMUS THERMOPHILUS ASPARTATE AMINOTRANSFERASE DOUBLE MUTANT 1
分子名称: PHOSPHATE ION, PROTEIN (ASPARTATE AMINOTRANSFERASE), PYRIDOXAL-5'-PHOSPHATE
著者Ura, H, Nakai, T, Kawaguchi, S.I, Miyahara, I, Hirotsu, K, Kuramitsu, S.
登録日1999-01-07
公開日2003-09-02
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Substrate recognition mechanism of thermophilic dual-substrate enzyme
J.BIOCHEM.(TOKYO), 130, 2001

 

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