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PDB: 16 件
8UKC
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Solution NMR Structure of the lasso peptide chlorolassin
分子名称: Lassopeptide Chlorolassin
著者Saad, H, Zhu, L, Harris, L.A, Shelton, K.E, Mitchell, D.A.
登録日2023-10-12
公開日2024-09-25
実験手法SOLUTION NMR
主引用文献Tryptophan-Centric Bioinformatics Identifies New Lasso Peptide Modifications.
Biochemistry, 63, 2024
8UKG
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Solution NMR structure of the lasso peptide wygwalassin-A1
分子名称: Lassopeptide wygwalassin-A1
著者Saad, H, Zhu, L, Harris, L.A, Shelton, K.E, Mitchell, D.A.
登録日2023-10-13
公開日2024-09-25
実験手法SOLUTION NMR
主引用文献Tryptophan-Centric Bioinformatics Identifies New Lasso Peptide Modifications.
Biochemistry, 63, 2024
8T19
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RiPP precursor peptide recognition element (RRE) domain of Ocin-ThiF-like partner protein, PbtF, bound to an 8 residue fragment of its precursor peptide, PbtA
分子名称: MAGNESIUM ION, PbtA, PbtF
著者Cogan, D.P, Nair, S.K, Mitchell, D.A.
登録日2023-06-02
公開日2024-06-12
実験手法X-RAY DIFFRACTION (1.23 Å)
主引用文献Discovery and validation of RRE domains
To Be Published
6F1D
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CUB2 domain of C1r
分子名称: CALCIUM ION, Complement C1r subcomponent, SODIUM ION
著者Almitairi, J.O.M, Venkatraman Girija, U, Furze, C.M, Simpson-Gray, X, Badakshi, F, Marshall, J.E, Mitchell, D.A, Moody, P.C.E, Wallis, R.
登録日2017-11-21
公開日2018-01-17
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structure of the C1r-C1s interaction of the C1 complex of complement activation.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6F1H
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C1rC1s complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-beta-D-galactopyranose-(1-4)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Almitairi, J.O.M, Venkatraman Girija, U, Furze, C.M, Simpson-Gray, X, Badakshi, F, Marshall, J.E, Mitchell, D.A, Moody, P.C.E, Wallis, R.
登録日2017-11-22
公開日2018-01-17
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (4.5 Å)
主引用文献Structure of the C1r-C1s interaction of the C1 complex of complement activation.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6F1C
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C1rC1s complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Complement C1r subcomponent, ...
著者Almitairi, J.O.M, Venkatraman Girija, U, Furze, C.M, Simpson-Gray, X, Badakshi, F, Marshall, J.E, Mitchell, D.A, Moody, P.C.E, Wallis, R.
登録日2017-11-21
公開日2018-01-17
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (4.2 Å)
主引用文献Structure of the C1r-C1s interaction of the C1 complex of complement activation.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6F39
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C1r homodimer CUB1-EGF-CUB2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Complement C1r subcomponent, ...
著者Almitairi, J.O.M, Venkatraman Girija, U, Furze, C.M, Simpson-Gray, X, Badakshi, F, Marshall, J.E, Mitchell, D.A, Moody, P.C.E, Wallis, R.
登録日2017-11-28
公開日2018-01-24
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (5.801 Å)
主引用文献Structure of the C1r-C1s interaction of the C1 complex of complement activation.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5JPL
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LP2006, a handcuff-topology lasso peptide antibiotic
分子名称: Uncharacterized protein
著者Tietz, J.I, Schwalen, C.J, Blair, P.M, Zakai, U.I, Mitchell, D.A.
登録日2016-05-03
公開日2017-03-01
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献A new genome-mining tool redefines the lasso peptide biosynthetic landscape.
Nat. Chem. Biol., 13, 2017
1K9J
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Complex of DC-SIGNR and GlcNAc2Man3
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose, CALCIUM ION, mDC-SIGN2 TYPE I ISOFORM
著者Feinberg, H, Mitchell, D.A, Drickamer, K, Weis, W.I.
登録日2001-10-29
公開日2001-12-21
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis for selective recognition of oligosaccharides by DC-SIGN and DC-SIGNR.
Science, 294, 2001
1K9I
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Complex of DC-SIGN and GlcNAc2Man3
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose, CALCIUM ION, mDC-SIGN1B type I isoform
著者Feinberg, H, Mitchell, D.A, Drickamer, K, Weis, W.I.
登録日2001-10-29
公開日2001-12-21
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis for selective recognition of oligosaccharides by DC-SIGN and DC-SIGNR.
Science, 294, 2001
1XAR
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Crystal Structure of a fragment of DC-SIGNR (containing the carbohydrate recognition domain and two repeats of the neck).
分子名称: CD209 antigen-like protein 1, SODIUM ION
著者Feinberg, H, Guo, Y, Mitchell, D.A, Drickamer, K, Weis, W.I.
登録日2004-08-26
公開日2004-11-16
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Extended Neck Regions Stabilize Tetramers of the Receptors DC-SIGN and DC-SIGNR
J.Biol.Chem., 280, 2005
2MW3
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BU of 2mw3 by Molmil
Solution NMR structure of the lasso peptide streptomonomicin
分子名称: Lasso peptide
著者Tietz, J.I, Zhu, L, Mitchell, D.A, Metelev, M, Melby, J.O, Blair, P.M, Livnat, I, Severinov, K.
登録日2014-10-24
公開日2015-01-28
最終更新日2024-10-16
実験手法SOLUTION NMR
主引用文献Structure, bioactivity, and resistance mechanism of streptomonomicin, an unusual lasso Peptide from an understudied halophilic actinomycete.
Chem.Biol., 22, 2015
1SL6
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Crystal Structure of a fragment of DC-SIGNR (containg the carbohydrate recognition domain and two repeats of the neck) complexed with Lewis-x.
分子名称: C-type lectin DC-SIGNR, CALCIUM ION, alpha-L-fucopyranose-(1-3)-[beta-D-galactopyranose-(1-4)]2-acetamido-2-deoxy-alpha-D-glucopyranose
著者Guo, Y, Feinberg, H, Conroy, E, Mitchell, D.A, Alvarez, R, Blixt, O, Taylor, M.E, Weis, W.I, Drickamer, K.
登録日2004-03-05
公開日2004-06-15
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural basis for distinct ligand-binding and targeting properties of the receptors DC-SIGN and DC-SIGNR
Nat.Struct.Mol.Biol., 11, 2004
7JS6
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Solution NMR structure of des-citrulassin F
分子名称: des-citrulassin F
著者Harris, L.A, Mitchell, D.A.
登録日2020-08-13
公開日2020-12-16
最終更新日2024-10-30
実験手法SOLUTION NMR
主引用文献Reactivity-Based Screening for Citrulline-Containing Natural Products Reveals a Family of Bacterial Peptidyl Arginine Deiminases.
Acs Chem.Biol., 15, 2020
1SL5
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Crystal Structure of DC-SIGN carbohydrate recognition domain complexed with LNFP III (Dextra L504).
分子名称: CALCIUM ION, MAGNESIUM ION, alpha-L-fucopyranose-(1-3)-[beta-D-galactopyranose-(1-4)]2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose, ...
著者Guo, Y, Feinberg, H, Conroy, E, Mitchell, D.A, Alvarez, R, Blixt, O, Taylor, M.E, Weis, W.I, Drickamer, K.
登録日2004-03-05
公開日2004-06-15
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis for distinct ligand-binding and targeting properties of the receptors DC-SIGN and DC-SIGNR
Nat.Struct.Mol.Biol., 11, 2004
1SL4
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Crystal Structure of DC-SIGN carbohydrate recognition domain complexed with Man4
分子名称: CALCIUM ION, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)-alpha-D-mannopyranose, mDC-SIGN1B type I isoform
著者Guo, Y, Feinberg, H, Conroy, E, Mitchell, D.A, Alvarez, R, Blixt, O, Taylor, M.E, Weis, W.I, Drickamer, K.
登録日2004-03-05
公開日2004-06-15
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structural basis for distinct ligand-binding and targeting properties of the receptors DC-SIGN and DC-SIGNR
Nat.Struct.Mol.Biol., 11, 2004

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