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PDB: 109 results

7FGJ
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The cross-reaction complex structure with VQILNK peptide and the tau antibody's Fab domain.
Descriptor: CHLORIDE ION, Fab Heavy Chain, Fab Light Chain, ...
Authors:Tsuchida, T, Tsuchiya, T, Miyamoto, K, In, Y, Minoura, K, Taniguchi, T, Ishida, T, Tomoo, K.
Deposit date:2021-07-27
Release date:2022-07-27
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:The cross-reaction complex structure with VQILNK peptide and the antibody's Fab domain.
To Be Published
7FGR
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The cross-reaction complex structure with VQIFNK peptide and the tau antibody's Fab domain.
Descriptor: AMMONIUM ION, CHLORIDE ION, Fab Heavy Chain, ...
Authors:Tsuchida, T, Tsuchiya, T, Miyamoto, K, In, Y, Minoura, K, Taniguchi, T, Ishida, T, Tomoo, K.
Deposit date:2021-07-27
Release date:2022-07-27
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The cross-reaction complex structure with VQIFNK peptide and the tau antibody's Fab domain.
To Be Published
7FGK
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BU of 7fgk by Molmil
The Fab antibody single structure against tau protein.
Descriptor: Fab Heavy Chain, Fab Light Chain, GLYCEROL, ...
Authors:Tsuchida, T, Susa, K, Kibiki, T, Tsuchiya, T, Miyamoto, K, In, Y, Minoura, K, Taniguchi, T, Ishida, T, Tomoo, K.
Deposit date:2021-07-27
Release date:2022-07-27
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The free structure of the Fab domain of antibody that recognizes the PHF core region VQIINK in Tau protein.
To Be Published
7FGL
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The complex structure of PHF core domain peptide of tau, VQIVYK, and antibody's Fab domain.
Descriptor: AMMONIUM ION, Fab Heavy Chain, Fab Light Chain, ...
Authors:Tsuchida, T, Tsuchiya, T, Miyamoto, K, In, Y, Minoura, K, Taniguchi, T, Ishida, T, Tomoo, K.
Deposit date:2021-07-27
Release date:2022-07-27
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The cross-reaction complex structure with VQIVYK of tau and the antibody's Fab domain.
To Be Published
3RFY
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BU of 3rfy by Molmil
Crystal structure of arabidopsis thaliana cyclophilin 38 (ATCYP38)
Descriptor: Peptidyl-prolyl cis-trans isomerase CYP38, chloroplastic
Authors:Vasudevan, D, Swaminathan, K.
Deposit date:2011-04-07
Release date:2012-06-13
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Crystal structure of Arabidopsis cyclophilin38 reveals a previously uncharacterized immunophilin fold and a possible autoinhibitory mechanism.
Plant Cell, 24, 2012
7C4O
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Solution structure of the Orange domain from human protein HES1
Descriptor: Transcription factor HES-1
Authors:Fan, J.S, Nayak, A, Swaminathan, K.
Deposit date:2020-05-18
Release date:2021-05-19
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Induction of Transcriptional Inhibitor Hairy and Enhancer of Split Homolog-1 and the Related Repression of Tumor-Suppressor Thioredoxin-Interacting Protein Are Important Components of Cell-Transformation Program Imposed by Oncogenic Kinase Nucleophosmin-Anaplastic Lymphoma Kinase.
Am J Pathol, 2022
5WVX
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BU of 5wvx by Molmil
Crystal Structure of bifunctional Kunitz type Trypsin /amylase inhibitor (AMTIN) from the tubers of Alocasia macrorrhiza
Descriptor: 2-acetamido-2-deoxy-beta-D-galactopyranose, CITRIC ACID, Trypsin/chymotrypsin inhibitor
Authors:Palayam, M, Radhakrishnan, M, Lakshminarayanan, K, Balu, K.E, Ganapathy, J, Krishnasamy, G.
Deposit date:2016-12-29
Release date:2018-06-13
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (3.003 Å)
Cite:Structural insights into a multifunctional inhibitor, 'AMTIN' from tubers of Alocasia macrorrhizos and its possible role in dengue protease (NS2B-NS3) inhibition.
Int. J. Biol. Macromol., 113, 2018
1P7O
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Crystal structure of phospholipase A2 (MIPLA4) from Micropechis ikaheka
Descriptor: PHOSPHOLIPASE A2
Authors:Lok, S.M, Swaminathan, K.
Deposit date:2003-05-05
Release date:2004-09-28
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure and function comparison of Micropechis ikaheka snake venom phospholipase A2 isoenzymes
FEBS J., 272, 2005
1OZY
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Crystal Structure of Phospholipase A2 (MIPLA3) From Micropechis Ikaheka
Descriptor: PHOSPHOLIPASE A2, SULFATE ION
Authors:Lok, S.M, Swaminathan, K.
Deposit date:2003-04-10
Release date:2004-09-28
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure and function comparison of Micropechis ikaheka snake venom phospholipase A2 isoenzymes
FEBS J., 272, 2005
3VUP
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Beta-1,4-mannanase from the common sea hare Aplysia kurodai
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Beta-1,4-mannanase, SULFATE ION
Authors:Mizutani, K, Tsuchiya, S, Toyoda, M, Nanbu, Y, Tominaga, K, Yuasa, K, Takahashi, N, Tsuji, A, Mikami, B.
Deposit date:2012-07-04
Release date:2012-10-17
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Structure of beta-1,4-mannanase from the common sea hare Aplysia kurodai at 1.05 A resolution.
Acta Crystallogr.,Sect.F, 68, 2012
1KHI
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CRYSTAL STRUCTURE OF HEX1
Descriptor: Hex1
Authors:Yuan, P, Swaminathan, K.
Deposit date:2001-11-30
Release date:2002-11-30
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:A HEX-1 crystal lattice required for Woronin body function in Neurospora crassa
NAT.STRUCT.BIOL., 10, 2003
2H4C
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BU of 2h4c by Molmil
Structure of Daboiatoxin (heterodimeric PLA2 venom)
Descriptor: Phospholipase A2-II, Phospholipase A2-III
Authors:Gopalan, G, Thwin, M.M, Gopalakrishnakone, P, Swaminathan, K.
Deposit date:2006-05-24
Release date:2007-05-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural and pharmacological comparison of daboiatoxin from Daboia russelli siamensis with viperotoxin F and vipoxin from other vipers.
ACTA CRYSTALLOGR.,SECT.D, 63, 2007
3WFL
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Crtstal structure of glycoside hydrolase family 5 beta-mannanase from Talaromyces trachyspermus
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
Authors:Suzuki, K, Ichinose, H, Kamino, K, Ogasawara, W, Kaneko, S, Fushinobu, S.
Deposit date:2013-07-19
Release date:2014-07-23
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Purification, cloning, functional expression, structure, and characterization of a thermostable beta-mannanase from Talaromyces trachyspermus and its efficiency in production of mannooligosaccharides from coffee wastes
To be Published
1M53
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CRYSTAL STRUCTURE OF ISOMALTULOSE SYNTHASE (PALI) FROM KLEBSIELLA SP. LX3
Descriptor: Isomaltulose Synthase
Authors:Li, N, Swaminathan, K.
Deposit date:2002-07-08
Release date:2003-07-08
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Isomaltulose synthase (PalI) of Klebsiella sp. LX3. Crystal structure and implication of mechanism
J.Biol.Chem., 278, 2003
1HI3
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Eosinophil-derived Neurotoxin (EDN) - Adenosine 2'-5'-Diphosphate Complex
Descriptor: ADENOSINE-2'-5'-DIPHOSPHATE, EOSINOPHIL-DERIVED NEUROTOXIN
Authors:Leonidas, D.D, Boix, E, Prill, R, Suzuki, M, Turton, R, Minson, K, Swaminathan, G.J, Youle, R.J, Acharya, K.R.
Deposit date:2001-01-02
Release date:2001-05-31
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Mapping the Ribonucleolytic Active Site of Eosinophil-Derived Neurotoxin (Edn): High Resolution Crystal Structures of Edn Complexes with Adenylic Nucleotide Inhibitors
J.Biol.Chem., 276, 2001
1Y0O
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crystal structure of reduced AtFKBP13
Descriptor: FKBP-type peptidyl-prolyl cis-trans isomerase 3
Authors:Gayathri, G, Swaminathan, K.
Deposit date:2004-11-15
Release date:2005-11-01
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Crystal structure of reduced AtFKBP13
to be published
1PWO
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BU of 1pwo by Molmil
Crystal Structure of Phospholipase A2 (MIPLA2) from Micropechis Ikaheka
Descriptor: Phospholipase A2
Authors:Lok, S.M, Swaminathan, K.
Deposit date:2003-07-02
Release date:2005-03-01
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure and function comparison of Micropechis ikaheka snake venom phospholipase A2 isoenzymes.
Febs J., 272, 2005
1WKV
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BU of 1wkv by Molmil
Crystal structure of O-phosphoserine sulfhydrylase
Descriptor: ACETATE ION, PYRIDOXAL-5'-PHOSPHATE, cysteine synthase
Authors:Oda, Y, Mino, K, Ishikawa, K, Ataka, M.
Deposit date:2004-06-09
Release date:2005-06-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Three-dimensional Structure of a New Enzyme, O-Phosphoserine Sulfhydrylase, involved in l-Cysteine Biosynthesis by a Hyperthermophilic Archaeon, Aeropyrum pernix K1, at 2.0A Resolution
J.Mol.Biol., 351, 2005
1HI2
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BU of 1hi2 by Molmil
Eosinophil-derived Neurotoxin (EDN) - Sulphate Complex
Descriptor: EOSINOPHIL-DERIVED NEUROTOXIN, SULFATE ION
Authors:Leonidas, D.D, Boix, E, Prill, R, Suzuki, M, Turton, R, Minson, K, Swaminathan, G.J, Youle, R.J, Acharya, K.R.
Deposit date:2001-01-02
Release date:2001-05-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Mapping the Ribonucleolytic Active Site of Eosinophil-Derived Neurotoxin (Edn): High Resolution Crystal Structures of Edn Complexes with Adenylic Nucleotide Inhibitors
J.Biol.Chem., 276, 2001
1HI5
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BU of 1hi5 by Molmil
Eosinophil-derived Neurotoxin (EDN) - Adenosine-5'-Diphosphate Complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, EOSINOPHIL-DERIVED NEUROTOXIN
Authors:Leonidas, D.D, Boix, E, Prill, R, Suzuki, M, Turton, R, Minson, K, Swaminathan, G.J, Youle, R.J, Acharya, K.R.
Deposit date:2001-01-02
Release date:2001-05-31
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Mapping the Ribonucleolytic Active Site of Eosinophil-Derived Neurotoxin (Edn): High Resolution Crystal Structures of Edn Complexes with Adenylic Nucleotide Inhibitors
J.Biol.Chem., 276, 2001
1HI4
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BU of 1hi4 by Molmil
Eosinophil-derived Neurotoxin (EDN) - Adenosien-3'-5'-Diphosphate Complex
Descriptor: ADENOSINE-3'-5'-DIPHOSPHATE, EOSINOPHIL-DERIVED NEUROTOXIN
Authors:Leonidas, D.D, Boix, E, Prill, R, Suzuki, M, Turton, R, Minson, K, Swaminathan, G.J, Youle, R.J, Acharya, K.R.
Deposit date:2001-01-02
Release date:2001-05-31
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Mapping the Ribonucleolytic Active Site of Eosinophil-Derived Neurotoxin (Edn): High Resolution Crystal Structures of Edn Complexes with Adenylic Nucleotide Inhibitors
J.Biol.Chem., 276, 2001
2MJO
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BU of 2mjo by Molmil
NMR structure of p75 transmembrane domain C257A mutant in DPC micelles
Descriptor: Tumor necrosis factor receptor superfamily member 16
Authors:Nadezhdin, K, Arseniev, A, Goncharuk, S, Mineev, K.
Deposit date:2014-01-15
Release date:2015-01-28
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Basis of p75 Transmembrane Domain Dimerization.
J. Biol. Chem., 291, 2016
2MIC
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BU of 2mic by Molmil
NMR structure of p75 transmembrane domain in DPC micelles
Descriptor: Tumor necrosis factor receptor superfamily member 16
Authors:Nadezhdin, K, Arseniev, A, Goncharuk, S, Mineev, K.
Deposit date:2013-12-12
Release date:2014-12-24
Last modified:2024-10-16
Method:SOLUTION NMR
Cite:Structural Basis of p75 Transmembrane Domain Dimerization.
J. Biol. Chem., 291, 2016
1UII
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BU of 1uii by Molmil
Crystal structure of Geminin coiled-coil domain
Descriptor: Geminin
Authors:Yuan, P, Swaminathan, K, Robinson, H.
Deposit date:2003-07-16
Release date:2004-07-16
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:A dimerized coiled-coil domain and an adjoining part of geminin interact with two sites on Cdt1 for replication inhibition
Mol.Cell, 15, 2004
1U79
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BU of 1u79 by Molmil
Crystal structure of AtFKBP13
Descriptor: FKBP-type peptidyl-prolyl cis-trans isomerase 3
Authors:Gopalan, G, Swaminathan, K.
Deposit date:2004-08-03
Release date:2004-09-28
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural analysis uncovers a role for redox in regulating FKBP13, an immunophilin of the chloroplast thylakoid lumen
Proc.Natl.Acad.Sci.Usa, 101, 2004

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